PARN 11437

Name: PARN	Sequence: fasta or formatted (578aa)		NCBI GI: 197333695
Description: poly(A)-specific ribonuclease (deadenylation nuclease) isoform 2		Referenced in: Polyadenylation RNases and RNA Stability
Other entries for this name: alt prot [639aa] poly(A)-specific ribonuclease (deadenylation nuclease) isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 29 1 C cysteine 1.6 9 1 D aspartate 5.4 31 2 E glutamate 8.8 51 3 F phenylalanine 5.7 33 2 G glycine 4.0 23 1 H histidine 1.9 11 1 I isoleucine 5.0 29 2 K lysine 8.8 51 2 L leucine 8.5 49 2 M methionine 1.7 10 1 N asparagine 4.5 26 2 P proline 5.7 33 2 Q glutamine 5.2 30 2 R arginine 4.2 24 2 S serine 8.7 50 3 T threonine 5.4 31 2 V valine 4.8 28 2 W tryptophan 1.0 6 1 Y tyrosine 4.2 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 poly(A)-specific ribonuclease (deadenylation nuclea... PARN 1.000 poly(A)-specific ribonuclease (deadenylation nuclease... PNLDC1 0.100 poly(A)-specific ribonuclease (PARN)-like domain con... C10orf28 0.012 growth inhibition and differentiation related prote... CAPRIN2 0.011 C1q domain containing 1 isoform 1 CAPRIN2 0.011 C1q domain containing 1 isoform 3 CAPRIN2 0.011 C1q domain containing 1 isoform 2 LOC727832 0.010 golgi autoantigen, golgin subfamily a-like MCM3 0.010 minichromosome maintenance complex component 3 TOE1 0.010 target of EGR1, member 1 (nuclear) LOC645202 0.009 PREDICTED: hypothetical protein LOC645202 TCHH 0.009 trichohyalin LOC283767 0.009 golgi autoantigen, golgin subfamily a-like GOLGA6D 0.009 golgi autoantigen, golgin subfamily a, 6D GOLGA6C 0.009 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... LOC400352 0.009 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.009 PREDICTED: similar to Putative golgin subfamily A m... GOLGA6 0.009 golgi autoantigen, golgin subfamily a, 6 LOC100133758 0.008 PREDICTED: hypothetical protein, partial LOC440243 0.008 PREDICTED: Putative golgin subfamily A member 6-lik... GOLGA6B 0.008 golgi autoantigen, golgin subfamily a, 6B LRRFIP2 0.008 leucine rich repeat (in FLII) interacting protein 2 i... PPFIBP2 0.007 PTPRF interacting protein, binding protein 2 (lipri... LOC283685 0.007 PREDICTED: golgi autoantigen, golgin subfamily a-li... CCDC91 0.007 GGA binding partner XPOT 0.007 tRNA exportin DCAF8L2 0.007 DDB1 and CUL4 associated factor 8-like 2 TNNT3 0.007 troponin T3, skeletal, fast isoform 3 TNNT3 0.007 troponin T3, skeletal, fast isoform 4 NAPG 0.006 N-ethylmaleimide-sensitive factor attachment protein,... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.