Guide to the Human Genome
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Name: WDFY2 Sequence: fasta or formatted (400aa) NCBI GI: 16418439
Description:

WD repeat and FYVE domain containing 2

Referenced in:

WD Repeat Proteins
Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         17           2
 C cysteine            3.5         14           1
 D aspartate           5.8         23           1
 E glutamate           6.0         24           2
 F phenylalanine       3.8         15           2
 G glycine             7.5         30           2
 H histidine           4.0         16           2
 I isoleucine          5.0         20           1
 K lysine              5.0         20           2
 L leucine             6.8         27           2
 M methionine          3.0         12           1
 N asparagine          2.5         10           1
 P proline             3.8         15           1
 Q glutamine           5.5         22           1
 R arginine            5.8         23           2
 S serine              8.8         35           2
 T threonine           6.2         25           2
 V valine              8.5         34           2
 W tryptophan          3.0         12           1
 Y tyrosine            1.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat and FYVE domain containing 2 
WDFY1                 0.671   WD repeat and FYVE domain containing 1 
HGS                   0.062   hepatocyte growth factor-regulated tyrosine kinase su...
WDR88                 0.054   PQQ repeat and WD repeat domain containing 
TAF5                  0.041   TBP-associated factor 5 
WDR69                 0.039   WD repeat domain 69 
WDR3                  0.038   WD repeat-containing protein 3 
ZFYVE28               0.037   zinc finger, FYVE domain containing 28 
ANKFY1                0.037   ankyrin repeat and FYVE domain containing 1 isoform...
WDR51B                0.037   WD repeat domain 51B 
COPA                  0.037   coatomer protein complex, subunit alpha isoform 1 [...
COPA                  0.037   coatomer protein complex, subunit alpha isoform 2 [...
NLE1                  0.037   Notchless gene homolog isoform b 
NLE1                  0.037   Notchless gene homolog isoform a 
RUFY1                 0.036   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.036   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.036   RUN and FYVE domain-containing 1 isoform a 
WDR38                 0.034   WD repeat domain 38 
ZFYVE1                0.034   zinc finger, FYVE domain containing 1 isoform 2 [Hom...
ZFYVE1                0.034   zinc finger, FYVE domain containing 1 isoform 1 [Hom...
WDR31                 0.033   WD repeat domain 31 isoform 1 
WDR31                 0.033   WD repeat domain 31 isoform 3 
PLEKHF2               0.033   phafin 2 
WDFY3                 0.033   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
WDFY3                 0.033   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
TAF5L                 0.033   PCAF associated factor 65 beta isoform a 
RRP9                  0.033   RNA, U3 small nucleolar interacting protein 2 
BTRC                  0.032   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.032   beta-transducin repeat containing protein isoform 1 ...
FBXW11                0.032   F-box and WD repeat domain containing 11 isoform C [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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