NLE1 34121

Name: NLE1	Sequence: fasta or formatted (193aa)		NCBI GI: 62234438
Description: Notchless gene homolog isoform b		Referenced in: Nucleus and Nucleolus WD Repeat Proteins
Other entries for this name: alt prot [485aa] Notchless gene homolog isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 20 2 C cysteine 0.5 1 1 D aspartate 8.3 16 2 E glutamate 3.6 7 1 F phenylalanine 2.6 5 1 G glycine 7.3 14 2 H histidine 1.6 3 1 I isoleucine 2.6 5 1 K lysine 5.7 11 2 L leucine 11.4 22 2 M methionine 1.6 3 1 N asparagine 1.6 3 1 P proline 4.1 8 1 Q glutamine 4.7 9 1 R arginine 7.3 14 2 S serine 10.9 21 2 T threonine 3.6 7 1 V valine 6.7 13 1 W tryptophan 3.1 6 1 Y tyrosine 2.6 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Notchless gene homolog isoform b NLE1 1.000 Notchless gene homolog isoform a WDR5 0.220 WD repeat domain 5 WDR5 0.220 WD repeat domain 5 WDR5B 0.215 WD repeat domain 5B KATNB1 0.198 katanin p80 subunit B 1 TAF5L 0.196 PCAF associated factor 65 beta isoform a WDR38 0.193 WD repeat domain 38 TAF5 0.190 TBP-associated factor 5 WDR69 0.190 WD repeat domain 69 PRPF4 0.187 PRP4 pre-mRNA processing factor 4 homolog PAFAH1B1 0.182 platelet-activating factor acetylhydrolase, isoform I... WDR51A 0.176 WD repeat domain 51A isoform 2 WDR51A 0.176 WD repeat domain 51A isoform 1 GNB2L1 0.174 guanine nucleotide binding protein (G protein), beta ... WDR51B 0.174 WD repeat domain 51B WDR51A 0.171 WD repeat domain 51A isoform 3 TBL1XR1 0.171 transducin (beta)-like 1 X-linked receptor 1 PEX7 0.168 peroxisomal biogenesis factor 7 TBL1X 0.168 transducin beta-like 1X isoform b TBL1X 0.168 transducin beta-like 1X isoform b TBL1X 0.168 transducin beta-like 1X isoform a TBL1X 0.168 transducin beta-like 1X isoform a WDR61 0.163 WD repeat domain 61 FBXW7 0.163 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.163 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.163 F-box and WD repeat domain containing 7 isoform 2 [H... SNRNP40 0.157 WD repeat domain 57 (U5 snRNP specific) PLRG1 0.157 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... TBL1Y 0.157 transducin beta-like 1Y Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.