Guide to the Human Genome
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Name: WDFY3 Sequence: fasta or formatted (281aa) NCBI GI: 31317270
Description:

WD repeat and FYVE domain containing 3 isoform 3

Referenced in:

WD Repeat Proteins
Zinc Finger Proteins

Other entries for this name:
alt prot [795aa] WD repeat and FYVE domain containing 3 isoform 2
alt prot [3526aa] WD repeat and FYVE domain containing 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         17           2
 C cysteine            4.3         12           1
 D aspartate           7.8         22           2
 E glutamate           7.5         21           1
 F phenylalanine       3.2          9           1
 G glycine             5.7         16           2
 H histidine           3.9         11           2
 I isoleucine          2.8          8           1
 K lysine              3.6         10           1
 L leucine             5.3         15           1
 M methionine          1.1          3           1
 N asparagine          2.8          8           1
 P proline             6.4         18           1
 Q glutamine           6.4         18           1
 R arginine            8.9         25           2
 S serine             12.5         35           2
 T threonine           3.6         10           1
 V valine              4.6         13           1
 W tryptophan          1.8          5           1
 Y tyrosine            1.8          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat and FYVE domain containing 3 isoform 3 [Ho... 
WDFY3                 1.000   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
MTMR4                 0.085   myotubularin related protein 4 
ZFYVE28               0.079   zinc finger, FYVE domain containing 28 
RUFY1                 0.076   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.076   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.076   RUN and FYVE domain-containing 1 isoform a 
RUFY2                 0.076   RUN and FYVE domain-containing 2 isoform a 
HGS                   0.074   hepatocyte growth factor-regulated tyrosine kinase su...
FGD6                  0.074   FYVE, RhoGEF and PH domain containing 6 
PLEKHF1               0.072   apoptosis-inducing protein D 
ANKFY1                0.070   ankyrin repeat and FYVE domain containing 1 isoform...
MTMR3                 0.070   myotubularin-related protein 3 isoform b 
MTMR3                 0.070   myotubularin-related protein 3 isoform c 
EEA1                  0.069   early endosome antigen 1, 162kD 
ZFYVE16               0.065   zinc finger, FYVE domain containing 16 
ZFYVE16               0.065   zinc finger, FYVE domain containing 16 
FGD2                  0.062   FYVE, RhoGEF and PH domain containing 2 
ZFYVE21               0.060   zinc finger, FYVE domain containing 21 
ZFYVE9                0.060   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
ZFYVE26               0.058   zinc finger, FYVE domain containing 26 
ZFYVE9                0.056   zinc finger, FYVE domain containing 9 isoform 1 [Hom...
ZFYVE9                0.056   zinc finger, FYVE domain containing 9 isoform 2 [Homo...
ZFYVE1                0.056   zinc finger, FYVE domain containing 1 isoform 2 [Hom...
ZFYVE1                0.056   zinc finger, FYVE domain containing 1 isoform 1 [Hom...
MTMR3                 0.056   myotubularin-related protein 3 isoform a 
PIKFYVE               0.055   phosphatidylinositol-3-phosphate 5-kinase type III ...
FYCO1                 0.055   FYVE and coiled-coil domain containing 1 
FGD4                  0.055   FYVE, RhoGEF and PH domain containing 4 
FGD3                  0.055   FYVE, RhoGEF and PH domain containing 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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