CADM1 4607

Name: CADM1	Sequence: fasta or formatted (442aa)		NCBI GI: 148664190
Description: immunoglobulin superfamily, member 4D isoform 1		Referenced in: Protein Composition and Structure Additional Genes in Development
Other entries for this name: alt prot [414aa] immunoglobulin superfamily, member 4D isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 36 8 C cysteine 1.8 8 1 D aspartate 5.7 25 2 E glutamate 6.3 28 2 F phenylalanine 2.9 13 1 G glycine 5.9 26 2 H histidine 1.8 8 1 I isoleucine 6.1 27 2 K lysine 4.3 19 2 L leucine 8.6 38 5 M methionine 2.3 10 1 N asparagine 4.3 19 2 P proline 5.4 24 3 Q glutamine 4.5 20 1 R arginine 3.8 17 1 S serine 5.7 25 3 T threonine 10.2 45 13 V valine 8.1 36 3 W tryptophan 0.7 3 1 Y tyrosine 3.4 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 immunoglobulin superfamily, member 4D isoform 1 [Ho... CADM1 0.916 immunoglobulin superfamily, member 4D isoform 2 [Ho... CADM2 0.369 immunoglobulin superfamily, member 4D CADM4 0.308 cell adhesion molecule 4 CADM3 0.293 cell adhesion molecule 3 isoform 2 CADM3 0.286 cell adhesion molecule 3 isoform 1 PVRL3 0.108 poliovirus receptor-related 3 CRTAM 0.080 class-I MHC-restricted T cell associated molecule [H... PVRL2 0.072 poliovirus receptor related 2 isoform delta precurs... PVRL2 0.071 poliovirus receptor related 2 isoform alpha precursor... PVRL1 0.069 poliovirus receptor-related 1 isoform 1 PVR 0.069 poliovirus receptor isoform delta PVR 0.069 poliovirus receptor isoform beta PVR 0.069 poliovirus receptor isoform alpha PVRL4 0.069 poliovirus receptor-related 4 PVR 0.066 poliovirus receptor isoform gamma KIRREL 0.064 kin of IRRE like NTM 0.063 neurotrimin isoform 4 NTM 0.063 neurotrimin isoform 3 NTM 0.063 neurotrimin isoform 1 PVRL1 0.062 poliovirus receptor-related 1 isoform 2 PVRL1 0.061 poliovirus receptor-related 1 isoform 3 CNTNAP2 0.059 cell recognition molecule Caspr2 precursor TTN 0.058 titin isoform N2-A HSPG2 0.058 heparan sulfate proteoglycan 2 HMCN2 0.058 PREDICTED: hemicentin 2 HMCN2 0.058 PREDICTED: hemicentin 2 NTM 0.058 neurotrimin isoform 2 HMCN2 0.058 PREDICTED: hemicentin 2 ROBO2 0.058 roundabout, axon guidance receptor, homolog 2 isofo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.