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Search of human proteins with 163838629
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|163838629 retinoblastoma-associated protein 140 isoform b
[Homo sapiens]
(1233 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|163838629 retinoblastoma-associated protein 140 isoform b [Ho... 2467 0.0
gi|163838631 retinoblastoma-associated protein 140 isoform a [Ho... 2092 0.0
gi|148806891 hypothetical protein LOC54906 [Homo sapiens] 182 2e-45
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 44 0.001
gi|46094009 melanoma inhibitory activity 2 [Homo sapiens] 43 0.002
gi|57232746 nuclear receptor interacting protein 1 [Homo sapiens] 42 0.003
gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo sa... 40 0.011
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 38 0.052
gi|157739936 chromosome 10 open reading frame 68 [Homo sapiens] 37 0.089
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 37 0.12
gi|153791839 sodium channel associated protein 1 [Homo sapiens] 37 0.15
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 36 0.26
gi|46852174 kinesin family member 3A [Homo sapiens] 35 0.34
gi|38569484 kinesin family member 21A [Homo sapiens] 35 0.34
gi|190341068 forkhead-associated (FHA) phosphopeptide binding do... 35 0.34
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 35 0.44
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 35 0.44
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 35 0.44
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 35 0.44
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 35 0.44
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 35 0.58
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 34 0.75
gi|154355004 strawberry notch homolog 2 isoform 2 [Homo sapiens] 34 0.75
gi|154355002 strawberry notch homolog 2 isoform 1 [Homo sapiens] 34 0.75
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 34 0.98
gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens] 34 0.98
gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens] 34 0.98
gi|122937243 dual specificity phosphatase 27 [Homo sapiens] 33 1.3
gi|110349786 Alstrom syndrome 1 [Homo sapiens] 33 1.3
gi|38505280 voltage-dependent calcium channel alpha 1G subunit i... 33 1.3
>gi|163838629 retinoblastoma-associated protein 140 isoform b [Homo
sapiens]
Length = 1233
Score = 2467 bits (6394), Expect = 0.0
Identities = 1233/1233 (100%), Positives = 1233/1233 (100%)
Query: 1 MSIDHLKQKIPPALFYKETYLGPNEVLKNGMYCSLYEVVEKTRIGSNMESLLQKLDREKL 60
MSIDHLKQKIPPALFYKETYLGPNEVLKNGMYCSLYEVVEKTRIGSNMESLLQKLDREKL
Sbjct: 1 MSIDHLKQKIPPALFYKETYLGPNEVLKNGMYCSLYEVVEKTRIGSNMESLLQKLDREKL 60
Query: 61 VLVKPLGDRGYLFLLSPYQMVPPYEYQTAKSRVLHALFLFQEPRSIVTSQKGSTNAAPQE 120
VLVKPLGDRGYLFLLSPYQMVPPYEYQTAKSRVLHALFLFQEPRSIVTSQKGSTNAAPQE
Sbjct: 61 VLVKPLGDRGYLFLLSPYQMVPPYEYQTAKSRVLHALFLFQEPRSIVTSQKGSTNAAPQE 120
Query: 121 RHESMPDVLKIAQFLQFSLIQCRKEFKNISAINFHSVVEKYVSEFFKRGFGSGKREFIMF 180
RHESMPDVLKIAQFLQFSLIQCRKEFKNISAINFHSVVEKYVSEFFKRGFGSGKREFIMF
Sbjct: 121 RHESMPDVLKIAQFLQFSLIQCRKEFKNISAINFHSVVEKYVSEFFKRGFGSGKREFIMF 180
Query: 181 PYDSRLDDKKFLYSAPRNKSHIDTCLHAYIFRPEVYQLPICKLKELFEENRKLQQFSPLS 240
PYDSRLDDKKFLYSAPRNKSHIDTCLHAYIFRPEVYQLPICKLKELFEENRKLQQFSPLS
Sbjct: 181 PYDSRLDDKKFLYSAPRNKSHIDTCLHAYIFRPEVYQLPICKLKELFEENRKLQQFSPLS 240
Query: 241 DYEGQEEEMNGTKMKFGKRNNSRGEAIISGKQRSSHSLDYDKDRVKELINLIQCRKKSVG 300
DYEGQEEEMNGTKMKFGKRNNSRGEAIISGKQRSSHSLDYDKDRVKELINLIQCRKKSVG
Sbjct: 241 DYEGQEEEMNGTKMKFGKRNNSRGEAIISGKQRSSHSLDYDKDRVKELINLIQCRKKSVG 300
Query: 301 GDSDTEDMRSKTVLKRKLEDLPENMRKLAKTSNLSENCHLYEESPQPIGSLGHDADLRRQ 360
GDSDTEDMRSKTVLKRKLEDLPENMRKLAKTSNLSENCHLYEESPQPIGSLGHDADLRRQ
Sbjct: 301 GDSDTEDMRSKTVLKRKLEDLPENMRKLAKTSNLSENCHLYEESPQPIGSLGHDADLRRQ 360
Query: 361 QQDTCNSGIADIHRLFNWLSETLANARHSDASLTDTVNKALGLSTDDAYEELRQKHEYEL 420
QQDTCNSGIADIHRLFNWLSETLANARHSDASLTDTVNKALGLSTDDAYEELRQKHEYEL
Sbjct: 361 QQDTCNSGIADIHRLFNWLSETLANARHSDASLTDTVNKALGLSTDDAYEELRQKHEYEL 420
Query: 421 NSTPDKKDYEQPTCAKVENAQFKGTQSLLLEVDATSKYSVAISTSEVGTDHKLHLKEDPN 480
NSTPDKKDYEQPTCAKVENAQFKGTQSLLLEVDATSKYSVAISTSEVGTDHKLHLKEDPN
Sbjct: 421 NSTPDKKDYEQPTCAKVENAQFKGTQSLLLEVDATSKYSVAISTSEVGTDHKLHLKEDPN 480
Query: 481 LISVNNFEDCSLCPSVPIEHGFRRQQSKSNNVEETEIHWKLIPITGGNARSPEDQLGKHG 540
LISVNNFEDCSLCPSVPIEHGFRRQQSKSNNVEETEIHWKLIPITGGNARSPEDQLGKHG
Sbjct: 481 LISVNNFEDCSLCPSVPIEHGFRRQQSKSNNVEETEIHWKLIPITGGNARSPEDQLGKHG 540
Query: 541 EKQTPDTLKGTTEDDVLTGQVEEQCVPAAEAEPPAVSETTERTVLGEYNLFSRKIEEILK 600
EKQTPDTLKGTTEDDVLTGQVEEQCVPAAEAEPPAVSETTERTVLGEYNLFSRKIEEILK
Sbjct: 541 EKQTPDTLKGTTEDDVLTGQVEEQCVPAAEAEPPAVSETTERTVLGEYNLFSRKIEEILK 600
Query: 601 QKNVSYVSTVSTPIFSTQEKMKRLSEFIYSKTSKAGVQEFVDGLHEKLNTIIIKASAKGG 660
QKNVSYVSTVSTPIFSTQEKMKRLSEFIYSKTSKAGVQEFVDGLHEKLNTIIIKASAKGG
Sbjct: 601 QKNVSYVSTVSTPIFSTQEKMKRLSEFIYSKTSKAGVQEFVDGLHEKLNTIIIKASAKGG 660
Query: 661 NLPPVSPNDSGAKIASNPLERHVIPVSSSDFNNKHLLEPLCSDPLKDTNSDEQHSTSALT 720
NLPPVSPNDSGAKIASNPLERHVIPVSSSDFNNKHLLEPLCSDPLKDTNSDEQHSTSALT
Sbjct: 661 NLPPVSPNDSGAKIASNPLERHVIPVSSSDFNNKHLLEPLCSDPLKDTNSDEQHSTSALT 720
Query: 721 EVEMNQPQHATELMVTSDHIVPGDMAREPVEETTKSPSDVNISAQPALSNFISQLEPEVF 780
EVEMNQPQHATELMVTSDHIVPGDMAREPVEETTKSPSDVNISAQPALSNFISQLEPEVF
Sbjct: 721 EVEMNQPQHATELMVTSDHIVPGDMAREPVEETTKSPSDVNISAQPALSNFISQLEPEVF 780
Query: 781 NSLVKIMKDVQKNTVKFYIHEEEESVLCKEIKEYLIKLGNTECHPEQFLERRSKLDKLLI 840
NSLVKIMKDVQKNTVKFYIHEEEESVLCKEIKEYLIKLGNTECHPEQFLERRSKLDKLLI
Sbjct: 781 NSLVKIMKDVQKNTVKFYIHEEEESVLCKEIKEYLIKLGNTECHPEQFLERRSKLDKLLI 840
Query: 841 IIQNEDIAGFIHKIPGLVTLKKLPCVSFAGVDSLDDVKNHTYNELFVSGGFIVSDESILN 900
IIQNEDIAGFIHKIPGLVTLKKLPCVSFAGVDSLDDVKNHTYNELFVSGGFIVSDESILN
Sbjct: 841 IIQNEDIAGFIHKIPGLVTLKKLPCVSFAGVDSLDDVKNHTYNELFVSGGFIVSDESILN 900
Query: 901 PEVVTVENLKNFLTFLEELSTPEGKWQWKVHCKFQKKLKELGRLNAKALSLLTLLNVYQK 960
PEVVTVENLKNFLTFLEELSTPEGKWQWKVHCKFQKKLKELGRLNAKALSLLTLLNVYQK
Sbjct: 901 PEVVTVENLKNFLTFLEELSTPEGKWQWKVHCKFQKKLKELGRLNAKALSLLTLLNVYQK 960
Query: 961 KHLVEILSYHNCDSQTRNAPELDCLIRLQAQNIQQRHIVFLTEKNIKMLSSYTDNGIVVA 1020
KHLVEILSYHNCDSQTRNAPELDCLIRLQAQNIQQRHIVFLTEKNIKMLSSYTDNGIVVA
Sbjct: 961 KHLVEILSYHNCDSQTRNAPELDCLIRLQAQNIQQRHIVFLTEKNIKMLSSYTDNGIVVA 1020
Query: 1021 TAEDFMQNFKNLVGYHNSITEENLPQLGANENLESQSALLENDEKDEEDMSLDSGDEISH 1080
TAEDFMQNFKNLVGYHNSITEENLPQLGANENLESQSALLENDEKDEEDMSLDSGDEISH
Sbjct: 1021 TAEDFMQNFKNLVGYHNSITEENLPQLGANENLESQSALLENDEKDEEDMSLDSGDEISH 1080
Query: 1081 IEVCSNFHSEIWEKETKGSRGTDQKKNTQIELQSSPDVQNSLLEDKTYLDSEERTSIDIV 1140
IEVCSNFHSEIWEKETKGSRGTDQKKNTQIELQSSPDVQNSLLEDKTYLDSEERTSIDIV
Sbjct: 1081 IEVCSNFHSEIWEKETKGSRGTDQKKNTQIELQSSPDVQNSLLEDKTYLDSEERTSIDIV 1140
Query: 1141 CSEGENSNSTEQDSYSNFQVYHSQLNMSHQFSHFNVLTHQTFLGTPYALSSSQSQENENY 1200
CSEGENSNSTEQDSYSNFQVYHSQLNMSHQFSHFNVLTHQTFLGTPYALSSSQSQENENY
Sbjct: 1141 CSEGENSNSTEQDSYSNFQVYHSQLNMSHQFSHFNVLTHQTFLGTPYALSSSQSQENENY 1200
Query: 1201 FLSAYTESLDRDKSPPPLSWGKSDSSRPYSQEK 1233
FLSAYTESLDRDKSPPPLSWGKSDSSRPYSQEK
Sbjct: 1201 FLSAYTESLDRDKSPPPLSWGKSDSSRPYSQEK 1233
>gi|163838631 retinoblastoma-associated protein 140 isoform a [Homo
sapiens]
Length = 1512
Score = 2092 bits (5420), Expect = 0.0
Identities = 1057/1098 (96%), Positives = 1057/1098 (96%), Gaps = 41/1098 (3%)
Query: 1 MSIDHLKQKIPPALFYKETYLGPNEVLKNGMYCSLYEVVEKTRIGSNMESLLQKLDREKL 60
MSIDHLKQKIPPALFYKETYLGPNEVLKNGMYCSLYEVVEKTRIGSNMESLLQKLDREKL
Sbjct: 397 MSIDHLKQKIPPALFYKETYLGPNEVLKNGMYCSLYEVVEKTRIGSNMESLLQKLDREKL 456
Query: 61 VLVKPLGDRGYLFLLSPYQMVPPYEYQTAKSRVLHALFLFQEPRSIVTSQKGSTNAAPQE 120
VLVKPLGDRGYLFLLSPYQMVPPYEYQTAKSRVLHALFLFQEPRSIVTSQKGSTNAAPQE
Sbjct: 457 VLVKPLGDRGYLFLLSPYQMVPPYEYQTAKSRVLHALFLFQEPRSIVTSQKGSTNAAPQE 516
Query: 121 RHESMPDVLKIAQFLQFSLIQCRKEFKNISAINFHSVVEKYVSEFFKRGFGSGKREFIMF 180
RHESMPDVLKIAQFLQFSLIQCRKEFKNISAINFHSVVEKYVSEFFKRGFGSGKREFIMF
Sbjct: 517 RHESMPDVLKIAQFLQFSLIQCRKEFKNISAINFHSVVEKYVSEFFKRGFGSGKREFIMF 576
Query: 181 PYDSRLDDKKFLYSAPRNKSHIDTCLHAYIFRPEVYQLPICKLKELFEENRKLQQFSPLS 240
PYDSRLDDKKFLYSAPRNKSHIDTCLHAYIFRPEVYQLPICKLKELFEENRKLQQFSPLS
Sbjct: 577 PYDSRLDDKKFLYSAPRNKSHIDTCLHAYIFRPEVYQLPICKLKELFEENRKLQQFSPLS 636
Query: 241 DYEGQEEEMNGTKMKFGKRNNSRGEAIISGKQRSSHSLDYDKDRVKELINLIQCRKKSVG 300
DYEGQEEEMNGTKMKFGKRNNSRGEAIISGKQRSSHSLDYDKDRVKELINLIQCRKKSVG
Sbjct: 637 DYEGQEEEMNGTKMKFGKRNNSRGEAIISGKQRSSHSLDYDKDRVKELINLIQCRKKSVG 696
Query: 301 GDSDTEDMRSKTVLKRKLEDLPENMRKLAKTSNLSENCHLYEESPQPIGSLGHDADLRRQ 360
GDSDTEDMRSKTVLKRKLEDLPENMRKLAKTSNLSENCHLYEESPQPIGSLGHDADLRRQ
Sbjct: 697 GDSDTEDMRSKTVLKRKLEDLPENMRKLAKTSNLSENCHLYEESPQPIGSLGHDADLRRQ 756
Query: 361 QQDTCNSGIADIHRLFNWLSETLANARHSDASLTDTVNKALGLSTDDAYEELRQKHEYEL 420
QQDTCNSGIADIHRLFNWLSETLANARHSDASLTDTVNKALGLSTDDAYEELRQKHEYEL
Sbjct: 757 QQDTCNSGIADIHRLFNWLSETLANARHSDASLTDTVNKALGLSTDDAYEELRQKHEYEL 816
Query: 421 NSTPDKKDYEQPTCAKVENAQFKGTQSLLLEVDATSKYSVAISTSEVGTDHKLHLKEDPN 480
NSTPDKKDYEQPTCAKVENAQFKGTQSLLLEVDATSKYSVAISTSEVGTDHKLHLKEDPN
Sbjct: 817 NSTPDKKDYEQPTCAKVENAQFKGTQSLLLEVDATSKYSVAISTSEVGTDHKLHLKEDPN 876
Query: 481 LISVNNFEDCSLCPSVPIEHGFRRQQSKSNNVEETEIHWKLIPITGGNARSPEDQLGKHG 540
LISVNNFEDCSLCPSVPIEHGFRRQQSKSNNVEETEIHWKLIPITGGNARSPEDQLGKHG
Sbjct: 877 LISVNNFEDCSLCPSVPIEHGFRRQQSKSNNVEETEIHWKLIPITGGNARSPEDQLGKHG 936
Query: 541 EKQTP-----------------------------------------DTLKGTTEDDVLTG 559
EKQTP DTLKGTTEDDVLTG
Sbjct: 937 EKQTPGMKSPEEQLVCVPPQEAFPNDPRVINRQRSSDYQFPSSPFTDTLKGTTEDDVLTG 996
Query: 560 QVEEQCVPAAEAEPPAVSETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTPIFSTQE 619
QVEEQCVPAAEAEPPAVSETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTPIFSTQE
Sbjct: 997 QVEEQCVPAAEAEPPAVSETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTPIFSTQE 1056
Query: 620 KMKRLSEFIYSKTSKAGVQEFVDGLHEKLNTIIIKASAKGGNLPPVSPNDSGAKIASNPL 679
KMKRLSEFIYSKTSKAGVQEFVDGLHEKLNTIIIKASAKGGNLPPVSPNDSGAKIASNPL
Sbjct: 1057 KMKRLSEFIYSKTSKAGVQEFVDGLHEKLNTIIIKASAKGGNLPPVSPNDSGAKIASNPL 1116
Query: 680 ERHVIPVSSSDFNNKHLLEPLCSDPLKDTNSDEQHSTSALTEVEMNQPQHATELMVTSDH 739
ERHVIPVSSSDFNNKHLLEPLCSDPLKDTNSDEQHSTSALTEVEMNQPQHATELMVTSDH
Sbjct: 1117 ERHVIPVSSSDFNNKHLLEPLCSDPLKDTNSDEQHSTSALTEVEMNQPQHATELMVTSDH 1176
Query: 740 IVPGDMAREPVEETTKSPSDVNISAQPALSNFISQLEPEVFNSLVKIMKDVQKNTVKFYI 799
IVPGDMAREPVEETTKSPSDVNISAQPALSNFISQLEPEVFNSLVKIMKDVQKNTVKFYI
Sbjct: 1177 IVPGDMAREPVEETTKSPSDVNISAQPALSNFISQLEPEVFNSLVKIMKDVQKNTVKFYI 1236
Query: 800 HEEEESVLCKEIKEYLIKLGNTECHPEQFLERRSKLDKLLIIIQNEDIAGFIHKIPGLVT 859
HEEEESVLCKEIKEYLIKLGNTECHPEQFLERRSKLDKLLIIIQNEDIAGFIHKIPGLVT
Sbjct: 1237 HEEEESVLCKEIKEYLIKLGNTECHPEQFLERRSKLDKLLIIIQNEDIAGFIHKIPGLVT 1296
Query: 860 LKKLPCVSFAGVDSLDDVKNHTYNELFVSGGFIVSDESILNPEVVTVENLKNFLTFLEEL 919
LKKLPCVSFAGVDSLDDVKNHTYNELFVSGGFIVSDESILNPEVVTVENLKNFLTFLEEL
Sbjct: 1297 LKKLPCVSFAGVDSLDDVKNHTYNELFVSGGFIVSDESILNPEVVTVENLKNFLTFLEEL 1356
Query: 920 STPEGKWQWKVHCKFQKKLKELGRLNAKALSLLTLLNVYQKKHLVEILSYHNCDSQTRNA 979
STPEGKWQWKVHCKFQKKLKELGRLNAKALSLLTLLNVYQKKHLVEILSYHNCDSQTRNA
Sbjct: 1357 STPEGKWQWKVHCKFQKKLKELGRLNAKALSLLTLLNVYQKKHLVEILSYHNCDSQTRNA 1416
Query: 980 PELDCLIRLQAQNIQQRHIVFLTEKNIKMLSSYTDNGIVVATAEDFMQNFKNLVGYHNSI 1039
PELDCLIRLQAQNIQQRHIVFLTEKNIKMLSSYTDNGIVVATAEDFMQNFKNLVGYHNSI
Sbjct: 1417 PELDCLIRLQAQNIQQRHIVFLTEKNIKMLSSYTDNGIVVATAEDFMQNFKNLVGYHNSI 1476
Query: 1040 TEENLPQLGANENLESQS 1057
TEENLPQLGANENLESQS
Sbjct: 1477 TEENLPQLGANENLESQS 1494
>gi|148806891 hypothetical protein LOC54906 [Homo sapiens]
Length = 2430
Score = 182 bits (461), Expect = 2e-45
Identities = 136/465 (29%), Positives = 232/465 (49%), Gaps = 22/465 (4%)
Query: 578 ETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTPIFSTQEKMK-RLSEFIYSKTSKAG 636
+ T+ T+ EY F+ K+++ +K + + S S +F + + + F +K S+A
Sbjct: 1969 DLTQNTLDLEYLRFAHKLKQTIKNGDSQH-SASSANVFPKESPTQISIGAFPSTKISEAP 2027
Query: 637 VQEFVDGLHEKLNTIIIKASAKGGNLPPVSPNDSGAKIASNPLER--HVIPVSSSDFNNK 694
L ++++ + P S +S+ ER H + +S N+
Sbjct: 2028 FLHPAPRSRSPLLVTVVESDPRPQGQPRRGYTASSLDSSSSWRERCSHNRDLRNSQRNHT 2087
Query: 695 ---HLLEPLCSDPLKDTNSDEQHSTSALTEVEMNQPQHATELMVTSDHIVPGDMAREPVE 751
HL + + +K++ +D + +N+ ++M S+ + D V
Sbjct: 2088 VSFHLNKLKYNSTVKESRND--------ISLILNEYAEFNKVMKNSNQFIFQDKELNDVS 2139
Query: 752 -ETTKSPSDVNISAQPA-LSNFISQLEPEVFNSLVKIMKDVQKNTVKFYIHEEEESVLCK 809
E T + + A + I + + L ++K+ K+T FY+ E E+
Sbjct: 2140 GEATAQEMYLPFPGRSASYEDIIIDVCTNLHVKLRSVVKEACKSTFLFYLVETEDKSFFV 2199
Query: 810 EIKEYLIKLGNTECHPEQFLER-RSKLDKLLIIIQNEDIAGFIHKIPGLVTLKKLPCVSF 868
K L K G+TE P+ F + + D L+III+NEDI+ +H+IP L+ LK P V F
Sbjct: 2200 RTKNLLRKGGHTEIEPQHFCQAFHRENDTLIIIIRNEDISSHLHQIPSLLKLKHFPSVIF 2259
Query: 869 AGVDSLDDVKNHTYNELFVSGGFIVSDESILNPEVVTVENLKNFLTFLEELSTPEGKWQW 928
AGVDS DV +HTY ELF +GGF++SD+ IL E VT+ LK + LE+L+ G+W+W
Sbjct: 2260 AGVDSPGDVLDHTYQELFRAGGFVISDDKIL--EAVTLVQLKEIIKILEKLN-GNGRWKW 2316
Query: 929 KVHCKFQKKLKELGRLNAKALSLLTLLNVYQKKHLVEILSYHNCDSQTRNAPE-LDCLIR 987
+H + KKLKE R+++ A +L +Q +++E+L YH CDS++ E L CL+
Sbjct: 2317 LLHYRENKKLKEDERVDSTAHKKNIMLKSFQSANIIELLHYHQCDSRSSTKAEILKCLLN 2376
Query: 988 LQAQNIQQRHIVFLTEKNIKMLSSYTDNGIVVATAEDFMQNFKNL 1032
LQ Q+I R V LT+K + ++GI+V +F++N + +
Sbjct: 2377 LQIQHIDARFAVLLTDKPTIPREVFENSGILVTDVNNFIENIEKI 2421
Score = 63.9 bits (154), Expect = 9e-10
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 24/240 (10%)
Query: 1 MSIDHLKQKIPPALFYKETYLGPNEVLKNGMYCSLYEVVEKTRIGSNMESLLQKLDREKL 60
M + LK+++P A F K+ YL +V + +LYEV R G N++ L + + ++L
Sbjct: 59 MKVSSLKKRLPEAAFRKQNYL-EEKVCFQDLCFNLYEVELSNRQGENIDKLTECIKNKQL 117
Query: 61 VLVKPLGDRGYLFLLSPYQMVPPYEYQTAKSRVLHALFLFQEPRSIVTSQKGSTNAAPQE 120
++K L DRG+ LL+ ++ ++ K LH L LF+ P S E
Sbjct: 118 AIIKCLEDRGFFILLTSSALLSEPDF-GGKQMGLHGLHLFRSPLST------GVKDLKVE 170
Query: 121 RHESMPDVLKIAQFLQFSLIQCRKEFKNISAINFHSVVEKYVSEFFKRGFGSGKREFIMF 180
SM V+ I L +L++ +K I+ +++V+++ E +K + + +
Sbjct: 171 DDISM-KVIPILSTLNCALLETKKSLPE-ERIHPNTLVKRHFQELYK----ADRSPSLSV 224
Query: 181 PYDSRLDDKKFLYSAP----------RNKSHIDTCLHAYIFRPEVYQLPICKLKELFEEN 230
R+ D FL P + S T L++Y P Y L + +L E+
Sbjct: 225 APQDRMKDPTFLGKLPSGFDLIPPAEKCPSESLTQLNSYFSDPSAYILEVSTALDLLAEH 284
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 43.5 bits (101), Expect = 0.001
Identities = 117/625 (18%), Positives = 239/625 (38%), Gaps = 96/625 (15%)
Query: 217 QLPICKLKELFEENRKLQQ------------FSPLSDYEGQEEEMNGTKMKFGKRNNSRG 264
Q + KE +EN+ LQ+ L+D E Q N K + G
Sbjct: 1486 QAALISRKEALKENKSLQEELSLARGTIERLTKSLADVESQVSAQNKEK------DTVLG 1539
Query: 265 EAIISGKQRSSHSLDYDKDRVKELINLIQCRKKSVGGDSDTEDMRSKTVLKRKLEDLPEN 324
+ ++R + D+ ++ C + + TED K L +++E L +
Sbjct: 1540 RLALLQEERDKLITEMDRSLLENQSLSSSCESLKLALEGLTED---KEKLVKEIESLKSS 1596
Query: 325 MRKLAKTSNLSE-NCHLYEESPQPIGSLGHDADLRRQQQDTCNSGIADIHRLFNWLSETL 383
K+A+++ E + L +E + S + ++ + Q + + L+ L T
Sbjct: 1597 --KIAESTEWQEKHKELQKEYEILLQSYENVSNEAERIQHVVEAVRQEKQELYGKLRSTE 1654
Query: 384 ANARHSDASLTDTVNKALGLSTDDAYEELRQKHEYELNSTPDK--KDYEQPTCAKVENAQ 441
AN + ++ L + + EE+++K S K + E+ + E
Sbjct: 1655 ANKKETEKQLQEA---------EQEMEEMKEKMRKFAKSKQQKILELEEENDRLRAEVHP 1705
Query: 442 FKGTQSLLLEVDATSKYSVAISTSEVGTDHKLHLKEDPNLISVNNFEDCSLCPSVP-IEH 500
T +E +S S+ V +++ K+ +L+S E SL V ++H
Sbjct: 1706 AGDTAKECMETLLSSNASMKEELERVKMEYETLSKKFQSLMS----EKDSLSEEVQDLKH 1761
Query: 501 GFRRQQSKSNNVEETEIHWKLIPITGGNARSPEDQLGKHGEKQTPDTLKGTTEDDVLTGQ 560
SK N+E TE H +T +S GE + D+L +T
Sbjct: 1762 QIEGNVSKQANLEATEKHDNQTNVTEEGTQSIP------GETEEQDSLSMSTRPTC---- 1811
Query: 561 VEEQCVPAAEAEPPAVSETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTPIFSTQEK 620
+ VP+A++ PAVS+ + + E N + ++I+++ +E+
Sbjct: 1812 --SESVPSAKSANPAVSK--DFSSHDEINNYLQQIDQL-------------------KER 1848
Query: 621 MKRLSEFIYSKTSKAGVQEFVDGLHEKLNTIIIKASAKGGNLPPVSPNDSGAKIASNPLE 680
+ L E K +EF L + NT++ + S K G L + + + + ++
Sbjct: 1849 IAGLEE------EKQKNKEFSQTLENEKNTLLSQISTKDGELKMLQEEVTKMNLLNQQIQ 1902
Query: 681 R---HVIPVSSSDFNNKHLLEPLCSDPLKDTNSDEQHSTSALTEVEMNQPQHATELMVTS 737
V + + K LE + L + N + +T+ ++ +E+
Sbjct: 1903 EELSRVTKLKETAEEEKDDLEERLMNQLAELNGSIGNYCQDVTDAQIKNELLESEMKNLK 1962
Query: 738 DHIVPGDMAREP-VEETTKSPSDV---------NISAQPALSNFISQLEPEVFNSLVKIM 787
+ + ++ V+E TK S++ +P + +L+ E+ + +
Sbjct: 1963 KCVSELEEEKQQLVKEKTKVESEIRKEYLEKIQGAQKEPGNKSHAKELQ-ELLKEKQQEV 2021
Query: 788 KDVQKNTVKFYIHEEEESVLCKEIK 812
K +QK+ +++ +E+ S L + +K
Sbjct: 2022 KQLQKDCIRY---QEKISALERTVK 2043
>gi|46094009 melanoma inhibitory activity 2 [Homo sapiens]
Length = 654
Score = 43.1 bits (100), Expect = 0.002
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 23/202 (11%)
Query: 1007 KMLSSYTDNGIVVATAEDFMQNFKNLVGYHNSITEENLP-------QLGANENLESQSAL 1059
K +S TD + + F+ NF N + N E LP Q EN E+
Sbjct: 442 KPVSEKTDESDTIPYLKKFLYNFDNPWNFQNIPKETELPFPKQILDQNNVIENEETGEFS 501
Query: 1060 LENDEKDEEDM-----SLDSGDEISHIEVCSNFHSEIWEKETKGSRGTDQKKNTQIELQS 1114
++N D + S D +S+IE+ + H E++ E S+ +D+ ++ +
Sbjct: 502 IDNYPTDNTKVMIFKSSYSLSDMVSNIELPTRIHEEVY-FEPSSSKDSDENSKPSVDTEG 560
Query: 1115 SPDVQNSLLEDKTYLDSEERTSIDIVCSEGENSNSTEQDSYSNFQV--YHSQLN----MS 1168
V+ + T L+S+ ++ + + S +N S ++D+ S FQ+ Y Q++ M+
Sbjct: 561 PALVEIDRSVENTLLNSQMVSTDNSLSS--QNYISQKEDA-SEFQILKYLFQIDVYDFMN 617
Query: 1169 HQFSHFNVLTHQTFLG-TPYAL 1189
FS +LT + L P+A+
Sbjct: 618 SAFSPIVILTERVSLPFKPFAI 639
>gi|57232746 nuclear receptor interacting protein 1 [Homo sapiens]
Length = 1158
Score = 42.4 bits (98), Expect = 0.003
Identities = 79/383 (20%), Positives = 144/383 (37%), Gaps = 48/383 (12%)
Query: 443 KGTQSLLLEVDATSKYSVAISTSEVGTDHKLHLKEDPNLISVNNF--EDCSLCPSVPIEH 500
KG Q L +S + T + + LKE +S ++ E C V H
Sbjct: 125 KGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSH 184
Query: 501 GFRRQQSKSNNVEETEIHWKLIPITGGNAR-----SPEDQLGKHGEKQTPDTLKGTTEDD 555
+ K + V++ + L +T R SP +G+ G K + L
Sbjct: 185 --LKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPH-HVGQSGTKVMSEPLSCAARLQ 241
Query: 556 VLTGQVEEQCVPAAEAEPPAVSETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTPIF 615
+ VE++ PA +P + E +L E LK +N + ++
Sbjct: 242 AVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAAS------ 295
Query: 616 STQEKMKRLSEFIYSKTSKAGVQEFVDGLHEKLN---------TIIIKASAKGGNLP--- 663
E++ ++ + G + G+ LN + K+SA P
Sbjct: 296 ---ERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGI 352
Query: 664 -PVSPNDSGAKIASNPLERHVIPVSSSDFNNKHLLE------PLCSDPLKDTNS--DEQH 714
P SP ++G K N LER+ I ++++ HLL+ P+ + S +E
Sbjct: 353 IPSSPKNAGYK---NSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESS 409
Query: 715 STSALTEVEMNQPQHATELM---VTSDHIVPGDMAREPVEETTKSPSDVNISAQPALSNF 771
+ + + E N P + + + VP D++ + T KS SD +S +
Sbjct: 410 TPTTIDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCK--HRTEKSESDQPVSLDNFTQSL 467
Query: 772 ISQLEPEVFNSLVKIMKDVQKNT 794
++ +P+V + +K +D KN+
Sbjct: 468 LNTWDPKVPDVDIKEDQDTSKNS 490
>gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo
sapiens]
Length = 1925
Score = 40.4 bits (93), Expect = 0.011
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 481 LISVNNFE---DCSLCPSVPIEHGFRRQQSKSNNVEETEIHWKLIPITGGNARSPEDQLG 537
L+ NF D SL VP F +QS ++ ++ L+PI + S ED G
Sbjct: 1686 LLEDKNFHEAVDQSLVEQVPYFRQFWNEQSTKFMDQKNSLY--LMPILPVPSSSWEDGKG 1743
Query: 538 KHGEKQTPDTLKGT---TEDDVLTGQVEEQCVPAAEAEPPAVSETTERTVLGEYNLFSRK 594
K ++ P+ G E + G+ EE+ + E E E TE LG+ + ++
Sbjct: 1744 KQPKEDRPEHYPGLGKKEEGEEEKGEEEEEELEEEEEE----EEETEEEELGKEEIEEKE 1799
Query: 595 IEEILKQKNVSYVSTVSTPIFSTQEKMK 622
E K++ VS+ TP +QE M+
Sbjct: 1800 EERDEKEEKVSWAGIGPTPQPESQESMQ 1827
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 38.1 bits (87), Expect = 0.052
Identities = 57/270 (21%), Positives = 109/270 (40%), Gaps = 40/270 (14%)
Query: 903 VVTVENLKNFLTFLE-ELSTPEGKWQWKVHCKFQKKLKELGRLNAKALSLLTLLNVYQKK 961
++ E+L+ + L+ EL GK + Q++ ++ L K + T +K
Sbjct: 477 ILNYESLREIMEILQTELGESAGKISQEFESMKQQQASDVHELQQKLRTAFT-----EKD 531
Query: 962 HLVEILSYHNCDSQTRNAPELDCLIRLQAQN---IQQRHIVFLTEKNIKMLSSYTDNGIV 1018
L+E ++ RLQ +N + Q+ +V E IK L NG+
Sbjct: 532 ALLETVN------------------RLQGENEKLLSQQELVPELENTIKNLQE--KNGVY 571
Query: 1019 VATAEDFMQNFKNLVGYHNSITEENLPQLGANENLESQSALLENDEKDEEDMSLDSGDEI 1078
+ + K L G NS+TEE + +N + + EE + L+ G +
Sbjct: 572 LLSLSQRDTMLKELEGKINSLTEEKDDFINKLKNSHEEMDNFHKKCEREERLILELGKK- 630
Query: 1079 SHIEVCSNFHSEIWEKETKGSRGTD----QKKNTQIELQSSPDVQNSLLEDKTYLDSEER 1134
+E ++SE+ +K + + G + +K +L+ L EDK L +E +
Sbjct: 631 --VEQTIQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVK 688
Query: 1135 TSIDIVCSEGENSNSTEQDSYSNFQVYHSQ 1164
+ + E +S ++ + +V+ SQ
Sbjct: 689 S----LYEENNKLSSEKKQLSRDLEVFLSQ 714
>gi|157739936 chromosome 10 open reading frame 68 [Homo sapiens]
Length = 628
Score = 37.4 bits (85), Expect = 0.089
Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 17/193 (8%)
Query: 991 QNIQQRHIVFLTEKNIKMLSSYTDNGIVVATAEDFMQNFKNLVGYHNSITEENLPQLGAN 1050
+N+ RH +++ +++ T G + T ++ + KNLV H + Q+
Sbjct: 59 ENLILRHQDSMSKSEMQVKEQRTLKGQRIITHDE--EPGKNLVLEHQDSVSKLEMQIEKT 116
Query: 1051 ENLESQSALLENDEKDEEDMSLDSGDEISHIEVCSNFHSEIWEKETKGSRGTDQKKNTQI 1110
+ L + +DE+ E+ L D +S I+V EI E R K + +
Sbjct: 117 KKLPREKRHSTHDEESGENPMLKHQDSVSKIQV----QLEIQETSEGEGRSIPDKNSMFV 172
Query: 1111 ELQSSPDVQNSLLEDKTYLDSEERTSIDIVCSEGENSNSTEQDSYSNFQVYH-SQLNMSH 1169
S +Q + E K ER + IV EN S QDS S Q+ Q+N
Sbjct: 173 HQDSVSKLQ--MQEKKKITPGRERRNTRIVV-PNENVISVHQDSKSKLQMQEKKQINS-- 227
Query: 1170 QFSHFNVLTHQTF 1182
V H+TF
Sbjct: 228 -----GVERHKTF 235
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 37.0 bits (84), Expect = 0.12
Identities = 56/269 (20%), Positives = 101/269 (37%), Gaps = 33/269 (12%)
Query: 223 LKELFEENRKLQQFSPLSDYEGQEEEMNGTKMKFGKRNNSRGEAIISGKQRSSHSLDYDK 282
+ EL E+ LQ+ + E E +M + +S EAI K +
Sbjct: 1203 MAELGEQIDNLQRVKQKLEKEKSELKMETDDL------SSNAEAISKAKGNLEKMCRSLE 1256
Query: 283 DRVKELINLIQCRKKSVGGDSDTEDMRSKTVLKRKLEDLPE--------NMRKLAKTSNL 334
D+V EL + +++ + D + R +T L E + K A T +
Sbjct: 1257 DQVSELKTKEEEQQRLIN-DLTAQRARLQTEAGEYSRQLDEKDALVSQLSRSKQASTQQI 1315
Query: 335 SENCHLYEESPQPIGSLGH-------DADLRRQQQDTCNSGIADIHRLFNWLSETLANAR 387
E H EE + +L H D DL R+Q + G A++ R + + +A R
Sbjct: 1316 EELKHQLEEETKAKNALAHALQSSRHDCDLLREQYEEEQEGKAELQRALSKANSEVAQWR 1375
Query: 388 HSDASLTDTVNKALGLSTDDAYEELRQKHEYELNSTPDKKDYEQPTCAKVENAQFK---G 444
TD + + + EE ++K L + + CA +E + +
Sbjct: 1376 TKYE--TDAIQRT------EELEEAKKKLAQRLQEAEEHVEAVNAKCASLEKTKQRLQNE 1427
Query: 445 TQSLLLEVDATSKYSVAISTSEVGTDHKL 473
+ L+L+V+ ++ A+ + D L
Sbjct: 1428 VEDLMLDVERSNAACAALDKKQRNFDKVL 1456
>gi|153791839 sodium channel associated protein 1 [Homo sapiens]
Length = 688
Score = 36.6 bits (83), Expect = 0.15
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 16/157 (10%)
Query: 370 ADIHRLFNWLSETLANARHSD---ASLTDTVNKALGLSTDDA-----YEELRQKHEYELN 421
+D +L L + R D LT N+ L TD + Y+E+ QK + L
Sbjct: 441 SDYRKLEEMHQRFLVSERSKDDLQLRLTRAENRIKQLETDSSEEISRYQEMIQKLQNVLE 500
Query: 422 STPDKKDY--EQPTCAKVENAQF-KGTQSLL-LEVDATSKYSVAISTSEVGTDHKLHLKE 477
S + EQ + EN Q K T+SL + ++A K V IST E H+ +KE
Sbjct: 501 SERENCGLVSEQRLKLQQENKQLRKETESLRKIALEAQKKAKVKISTME----HEFSIKE 556
Query: 478 DPNLISVNNFEDCSLCPSVPIEHGFRRQQSKSNNVEE 514
+ + ED + V + H QQ +N +E
Sbjct: 557 RGFEVQLREMEDSNRNSIVELRHLLATQQKAANRWKE 593
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 35.8 bits (81), Expect = 0.26
Identities = 43/209 (20%), Positives = 84/209 (40%), Gaps = 29/209 (13%)
Query: 272 QRSSHSLDYDKDRVK----ELINLIQCRKKSVGGDSDTEDMRSKTVLKRKLEDLPENMRK 327
QRS L K R++ EL ++ ++ V S RSK ++ E+L + +
Sbjct: 1268 QRSLSELTTQKSRLQTEAGELSRQLEEKESIVSQLS-----RSKQAFTQQTEELKRQLEE 1322
Query: 328 LAKTSNLSENCHLYEESPQPIGSLGHDADLRRQQQDTCNSGIADIHRLFNWLSETLANAR 387
K N + + S HD DL R+Q + G A++ R + + +A R
Sbjct: 1323 ENKAKNALAHA---------LQSSRHDCDLLREQYEEEQEGKAELQRALSKANSEVAQWR 1373
Query: 388 HSDASLTDTVNKALGLSTDDAYEELRQKHEYELNSTPDKKDYEQPTCAKVENAQFK---G 444
TD + + + EE ++K L + ++ + CA +E + +
Sbjct: 1374 TKYE--TDAIQRT------EELEEAKKKLAQRLQDSEEQVEAVNAKCASLEKTKQRLQGE 1425
Query: 445 TQSLLLEVDATSKYSVAISTSEVGTDHKL 473
+ L+++V+ + + A+ + D L
Sbjct: 1426 VEDLMVDVERANSLAAALDKKQRNFDKVL 1454
>gi|46852174 kinesin family member 3A [Homo sapiens]
Length = 699
Score = 35.4 bits (80), Expect = 0.34
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 1049 ANENLESQSALLENDEKDEEDMS--LDSGDEISHIEVCSNFHSEIWEKETKGSRGTDQKK 1106
A N + + ALL +K+ E++ L+ G+EIS ++ + + E E G G +KK
Sbjct: 349 ARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEDDDEEGEV-GEDGEKRKK 407
Query: 1107 ---------NTQIELQSSPDVQNSLLEDKTYLDSEER 1134
+ IE+Q+ D + LE K ++ EER
Sbjct: 408 RRGKKKVSPDKMIEMQAKIDEERKALETKLDMEEEER 444
>gi|38569484 kinesin family member 21A [Homo sapiens]
Length = 1661
Score = 35.4 bits (80), Expect = 0.34
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 1093 EKETKGSRGTDQKKNTQIELQSSPDVQNSLLEDKTYLDSEERTSIDIVCSEGENSNSTEQ 1152
++E K +G +++N ++E++ S +V + ED+ + EE ID E + + +E
Sbjct: 569 DQEKKEEKGVSERENNELEVEESQEVSDH--EDEEEEEEEEEDDID--GGESSDESDSES 624
Query: 1153 DSYSNFQ 1159
D +N+Q
Sbjct: 625 DEKANYQ 631
>gi|190341068 forkhead-associated (FHA) phosphopeptide binding
domain 1 [Homo sapiens]
Length = 1412
Score = 35.4 bits (80), Expect = 0.34
Identities = 34/175 (19%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 243 EGQEEEMNGTKMKFGKRNNSRGEAIISGKQRSSHSLDYDKDRVKELINLIQCRKKSVGGD 302
E + + M + ++ + ++I K R +L+ ++ RV+EL + +K+ +
Sbjct: 706 EEERKRMQELESLLAQQKKALAKSITQEKNRVKEALEEEQTRVQELEERLARQKEVLESS 765
Query: 303 SDTEDMRSKTVL---KRKLEDLPENM--RKLAKTSNLSENCHLYEESPQP---------- 347
E ++K L KRK++DL ++ +K SN++ +E+ +
Sbjct: 766 IAHEKRKAKEALESEKRKVQDLENHLTQQKEISESNIAYEKRKAKEAMEKEKKKVQDLEN 825
Query: 348 -IGSLGHDADLRRQQQDTCNSGIADIHRLFNWLSETLANARHSDASLTDTVNKAL 401
+ + +L+ Q++D N+ ++D + +T A SL +N+ L
Sbjct: 826 RLTKQKEELELKEQKEDVLNNKLSDALAMVEETQKTKATESLKAESLALKLNETL 880
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 35.0 bits (79), Expect = 0.44
Identities = 64/300 (21%), Positives = 117/300 (39%), Gaps = 21/300 (7%)
Query: 335 SENCHLYEESPQPIGSLGHDADLRRQQQDTCNSG--IADIHRLFNWLSETLANARHSDAS 392
+E+ +L E P I ++ D+DLR ++ CN+G I ++H+ S+ +A ++ S
Sbjct: 793 TESVNLKESKPL-ILNVTEDSDLRESEELECNTGSNITNMHQ-DKETSDAFHSATYTTIS 850
Query: 393 -LTDTVNKALGLSTDDAYEELRQKHE-YELNSTPDKKDYEQPTCAKVENAQFKGTQSLLL 450
L DT ++ + D +R H + PD+K+ + ++ FK Q
Sbjct: 851 QLPDTETHSISKAKADTLRIIRLSHSASKQEKLPDEKETQNAEYID-KSCTFKKPQ---- 905
Query: 451 EVDATSKYSVAISTSEVGTDHKLHLKEDPNLISVNNFEDCSLCPSVP-IEHGFRRQQSKS 509
+ D + A S G +HLK+ P + + S P E + Q +
Sbjct: 906 QCDRKEQEKEANSELTQGFRFSIHLKQKPKYVKFQMEQISSGSSKAPNKEQEVQPQTLST 965
Query: 510 NNVEETEIHWKLIPITGGNARSPEDQ---LGKHGEKQTPDTLKGTTEDDVLTGQVEEQCV 566
+ E + P + D+ G+ + P T+ L + E V
Sbjct: 966 QTILENSPCPMMDPFQVEKVKQSTDRPTDRESAGDPKNPLTMPENLPVGELLIETTEYSV 1025
Query: 567 PAAEAEPPAVSETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTPIFSTQEKMKRLSE 626
P + +TT+ + E R + + +++ T+ P F QE K+LSE
Sbjct: 1026 PFG----GNLQKTTDSHIAEEKEDVKRYLPAVALGSFNNHLLTL--PYFKRQEIKKKLSE 1079
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 35.0 bits (79), Expect = 0.44
Identities = 64/300 (21%), Positives = 117/300 (39%), Gaps = 21/300 (7%)
Query: 335 SENCHLYEESPQPIGSLGHDADLRRQQQDTCNSG--IADIHRLFNWLSETLANARHSDAS 392
+E+ +L E P I ++ D+DLR ++ CN+G I ++H+ S+ +A ++ S
Sbjct: 722 TESVNLKESKPL-ILNVTEDSDLRESEELECNTGSNITNMHQ-DKETSDAFHSATYTTIS 779
Query: 393 -LTDTVNKALGLSTDDAYEELRQKHE-YELNSTPDKKDYEQPTCAKVENAQFKGTQSLLL 450
L DT ++ + D +R H + PD+K+ + ++ FK Q
Sbjct: 780 QLPDTETHSISKAKADTLRIIRLSHSASKQEKLPDEKETQNAEYID-KSCTFKKPQ---- 834
Query: 451 EVDATSKYSVAISTSEVGTDHKLHLKEDPNLISVNNFEDCSLCPSVP-IEHGFRRQQSKS 509
+ D + A S G +HLK+ P + + S P E + Q +
Sbjct: 835 QCDRKEQEKEANSELTQGFRFSIHLKQKPKYVKFQMEQISSGSSKAPNKEQEVQPQTLST 894
Query: 510 NNVEETEIHWKLIPITGGNARSPEDQ---LGKHGEKQTPDTLKGTTEDDVLTGQVEEQCV 566
+ E + P + D+ G+ + P T+ L + E V
Sbjct: 895 QTILENSPCPMMDPFQVEKVKQSTDRPTDRESAGDPKNPLTMPENLPVGELLIETTEYSV 954
Query: 567 PAAEAEPPAVSETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTPIFSTQEKMKRLSE 626
P + +TT+ + E R + + +++ T+ P F QE K+LSE
Sbjct: 955 PFG----GNLQKTTDSHIAEEKEDVKRYLPAVALGSFNNHLLTL--PYFKRQEIKKKLSE 1008
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 35.0 bits (79), Expect = 0.44
Identities = 64/300 (21%), Positives = 117/300 (39%), Gaps = 21/300 (7%)
Query: 335 SENCHLYEESPQPIGSLGHDADLRRQQQDTCNSG--IADIHRLFNWLSETLANARHSDAS 392
+E+ +L E P I ++ D+DLR ++ CN+G I ++H+ S+ +A ++ S
Sbjct: 722 TESVNLKESKPL-ILNVTEDSDLRESEELECNTGSNITNMHQ-DKETSDAFHSATYTTIS 779
Query: 393 -LTDTVNKALGLSTDDAYEELRQKHE-YELNSTPDKKDYEQPTCAKVENAQFKGTQSLLL 450
L DT ++ + D +R H + PD+K+ + ++ FK Q
Sbjct: 780 QLPDTETHSISKAKADTLRIIRLSHSASKQEKLPDEKETQNAEYID-KSCTFKKPQ---- 834
Query: 451 EVDATSKYSVAISTSEVGTDHKLHLKEDPNLISVNNFEDCSLCPSVP-IEHGFRRQQSKS 509
+ D + A S G +HLK+ P + + S P E + Q +
Sbjct: 835 QCDRKEQEKEANSELTQGFRFSIHLKQKPKYVKFQMEQISSGSSKAPNKEQEVQPQTLST 894
Query: 510 NNVEETEIHWKLIPITGGNARSPEDQ---LGKHGEKQTPDTLKGTTEDDVLTGQVEEQCV 566
+ E + P + D+ G+ + P T+ L + E V
Sbjct: 895 QTILENSPCPMMDPFQVEKVKQSTDRPTDRESAGDPKNPLTMPENLPVGELLIETTEYSV 954
Query: 567 PAAEAEPPAVSETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTPIFSTQEKMKRLSE 626
P + +TT+ + E R + + +++ T+ P F QE K+LSE
Sbjct: 955 PFG----GNLQKTTDSHIAEEKEDVKRYLPAVALGSFNNHLLTL--PYFKRQEIKKKLSE 1008
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 35.0 bits (79), Expect = 0.44
Identities = 64/300 (21%), Positives = 117/300 (39%), Gaps = 21/300 (7%)
Query: 335 SENCHLYEESPQPIGSLGHDADLRRQQQDTCNSG--IADIHRLFNWLSETLANARHSDAS 392
+E+ +L E P I ++ D+DLR ++ CN+G I ++H+ S+ +A ++ S
Sbjct: 722 TESVNLKESKPL-ILNVTEDSDLRESEELECNTGSNITNMHQ-DKETSDAFHSATYTTIS 779
Query: 393 -LTDTVNKALGLSTDDAYEELRQKHE-YELNSTPDKKDYEQPTCAKVENAQFKGTQSLLL 450
L DT ++ + D +R H + PD+K+ + ++ FK Q
Sbjct: 780 QLPDTETHSISKAKADTLRIIRLSHSASKQEKLPDEKETQNAEYID-KSCTFKKPQ---- 834
Query: 451 EVDATSKYSVAISTSEVGTDHKLHLKEDPNLISVNNFEDCSLCPSVP-IEHGFRRQQSKS 509
+ D + A S G +HLK+ P + + S P E + Q +
Sbjct: 835 QCDRKEQEKEANSELTQGFRFSIHLKQKPKYVKFQMEQISSGSSKAPNKEQEVQPQTLST 894
Query: 510 NNVEETEIHWKLIPITGGNARSPEDQ---LGKHGEKQTPDTLKGTTEDDVLTGQVEEQCV 566
+ E + P + D+ G+ + P T+ L + E V
Sbjct: 895 QTILENSPCPMMDPFQVEKVKQSTDRPTDRESAGDPKNPLTMPENLPVGELLIETTEYSV 954
Query: 567 PAAEAEPPAVSETTERTVLGEYNLFSRKIEEILKQKNVSYVSTVSTPIFSTQEKMKRLSE 626
P + +TT+ + E R + + +++ T+ P F QE K+LSE
Sbjct: 955 PFG----GNLQKTTDSHIAEEKEDVKRYLPAVALGSFNNHLLTL--PYFKRQEIKKKLSE 1008
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 35.0 bits (79), Expect = 0.44
Identities = 127/647 (19%), Positives = 244/647 (37%), Gaps = 105/647 (16%)
Query: 246 EEEMNGTKMKFGKRNNSRGEAIISGKQRSSHSLDYDKDRVKELINLIQCRK----KSVGG 301
E ++N +++F ++ E + G +R L + ++KE+ Q + K +G
Sbjct: 1070 ESKLNSLEIEFHHTRDALREKTL-GLERVQKDLSQTQCQMKEMEQKYQNEQVKVNKYIGK 1128
Query: 302 DSDTEDMRSKT-----VLKRKLEDLPENMRKLAKTS-NLSENCH---------------- 339
E+ S+ +L+++L+D KT N+ + H
Sbjct: 1129 QESVEERLSQLQSENMLLRQQLDDAHNKADNKEKTVINIQDQFHAIVQKLQAESEKQSLL 1188
Query: 340 LYEESPQPIGSLGHDADLRRQQQDTCNSGIADIHRLFNWLSETLANARHSDASLTDTVNK 399
L E + + I H + + Q ++ + +L L++TL S+ASL T
Sbjct: 1189 LEERNKELISECNHLKERQYQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVTSRY 1248
Query: 400 ALGLSTDDAYEELRQKHEYELNSTPDKKDY--EQPTCA--------KVENAQFKGTQSLL 449
+ L +D ++L++K N + +D E CA K+E K ++
Sbjct: 1249 RINL--EDETQDLKKKLGQIRNQLQEAQDRHTEAVRCAEKMQDHKQKLEKDNAKLKVTVK 1306
Query: 450 LEVDATSKYSVAISTSEVGTDHKLHLKEDPNLISVNNFEDCSLCPSVPIEHGFRRQQSKS 509
++D + + + + D K LK+ L+ + +C+L Q+ K
Sbjct: 1307 KQMDKIEELQKNLLNANLSEDEKEQLKK---LMELKQSLECNL-----------DQEMKK 1352
Query: 510 NNVEETEIHW--KLIPITGGNARSPED-QLGKHGEKQTPDTLKGTTEDDVLTGQVEEQCV 566
N E EI L+ +T E+ + HG+ +T + + + L ++++
Sbjct: 1353 NVELEREITGFKNLLKMTRKKLNEYENGEFSFHGDLKTSQ-FEMDIQINKLKHKIDDLTA 1411
Query: 567 PAAEAEPPAVSETTERTVLGEYNL----FSRKIEEILKQKNV--SYVSTVSTPIFSTQEK 620
A + T+ +L E L +K E++ K K V + + I +
Sbjct: 1412 ELETAGSKCLHLDTKNQILQEELLSMKTVQKKCEKLQKNKKKLEQEVINLRSHIERNMVE 1471
Query: 621 MKRLSEFIYSKTSKAGVQEFVDGLHEKLNTIIIKASAKGGNLPPVSPNDSGA-------K 673
+ ++ ++ +A QE + L E +N + +A NL N+ + +
Sbjct: 1472 LGQVKQYKQEIEERAR-QEIAEKLKE-VNLFLQAQAASQENLEQFRENNFASMKSQMELR 1529
Query: 674 IASNPLERHVIPVSSSDFNNKHL-------LEPL-----CSDPLKDTNS----------- 710
I E I S DFN L LE L S L TN
Sbjct: 1530 IKDLESELSKIKTSQEDFNKTELEKYKQLYLEELKVRKSLSSKLTKTNERLAEVNTKLLV 1589
Query: 711 DEQHSTS---ALTEVEMNQPQHATELMVTSD---HIVPGDMAREPVEETTKSPSDVNISA 764
++Q S S LT + +P L + D ++P RE + +T +P N S
Sbjct: 1590 EKQQSRSLFTTLTTRPVMEPPCVGNLNNSLDLNRKLIP----RENLVISTSNPRASNNSM 1645
Query: 765 QPALSNFISQLEPEVFNSLVKIMKDVQKNTVKFYIHEEEESVLCKEI 811
+ LS +LE + L + +++ ++ + +ES L +++
Sbjct: 1646 ENYLSKMQQELEKNITRELKEAAAELESGSIASPLGSTDESNLNQDL 1692
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 34.7 bits (78), Expect = 0.58
Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 39/171 (22%)
Query: 195 APRNKSHIDTCLHAYIFRPEVYQLPICK-----LKELFEE---------------NRKLQ 234
A +N H+++ +H++ E+ +L IC+ LKE FE+ N K+Q
Sbjct: 1497 AEKNIQHLNSQIHSFRDEKELERLQICQRKSDHLKEQFEKSHEQLLQNIKAEKENNDKIQ 1556
Query: 235 QFSPLSDYEGQEEEMNGTKMKFGKRNNSRGEAIISGKQRSSHSLDYDKDRVKELINLIQC 294
+ + + + EM K++ R N+ + ++ Q S ++ +K +++ +C
Sbjct: 1557 RLNEELEKSNECAEMLKQKVEELTRQNNETKLMMQRIQAESENIVLEKQTIQQ-----RC 1611
Query: 295 RKKSVGGDSDTEDMRS-----------KTVLKRKLEDLPENMRKLAKTSNL 334
+ D + +RS + +RK++ L E+ LAK+ NL
Sbjct: 1612 EALKIQADGFKDQLRSTNEHLHKQTKTEQDFQRKIKCLEED---LAKSQNL 1659
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 34.3 bits (77), Expect = 0.75
Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 17/133 (12%)
Query: 309 RSKTVLKRKLEDLPENMRKLAKTSNLSENCHLYEESPQPIGSLGHDADLRRQQQDTCNSG 368
+SK L ++LE+L M + K N + + S HD DL R+Q +
Sbjct: 1307 KSKQALTQQLEELKRQMEEETKAKNAMAHA---------LQSSRHDCDLLREQYEEEQEA 1357
Query: 369 IADIHRLFNWLSETLANARHSDASLTDTVNKALGLSTDDAYEELRQKHEYELNSTPDKKD 428
A++ R + + +A R TD + + + EE ++K L + +
Sbjct: 1358 KAELQRALSKANSEVAQWRTKYE--TDAIQRT------EELEEAKKKLAQRLQEAEENTE 1409
Query: 429 YEQPTCAKVENAQ 441
CA +E +
Sbjct: 1410 TANSKCASLEKTK 1422
>gi|154355004 strawberry notch homolog 2 isoform 2 [Homo sapiens]
Length = 1309
Score = 34.3 bits (77), Expect = 0.75
Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Query: 1000 FLTEKNIKMLSSYTDNGIVVATAEDFMQNFKNLVGYHNSITEENLPQLGANENLESQSAL 1059
FL ++ +S+ D+ +T + Q + G+ + + + P L + + QS
Sbjct: 66 FLPADSLNQVSTIWDDNPAPSTHDKLFQLSRPFAGFEDFLPSHSTPLLVSYQEQSVQSQP 125
Query: 1060 LENDEKDEEDMSLDSGDEISHIEVCSNFHSEIWEKETKGSRGTDQKKNTQ-IELQSSPDV 1118
E DE +EE+ +E+ H E +++ + K G + D+ T + PD+
Sbjct: 126 EEEDEAEEEE-----AEELGHTETYADY---VPSKSKIGKQHPDRVVETSTLSSVPPPDI 177
Query: 1119 QNSLL--EDKTYLDSEERTSIDIVCSEGE 1145
+L D L + + +I C + E
Sbjct: 178 TYTLALPSDSGALSALQLEAITYACQQHE 206
>gi|154355002 strawberry notch homolog 2 isoform 1 [Homo sapiens]
Length = 1366
Score = 34.3 bits (77), Expect = 0.75
Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Query: 1000 FLTEKNIKMLSSYTDNGIVVATAEDFMQNFKNLVGYHNSITEENLPQLGANENLESQSAL 1059
FL ++ +S+ D+ +T + Q + G+ + + + P L + + QS
Sbjct: 123 FLPADSLNQVSTIWDDNPAPSTHDKLFQLSRPFAGFEDFLPSHSTPLLVSYQEQSVQSQP 182
Query: 1060 LENDEKDEEDMSLDSGDEISHIEVCSNFHSEIWEKETKGSRGTDQKKNTQ-IELQSSPDV 1118
E DE +EE+ +E+ H E +++ + K G + D+ T + PD+
Sbjct: 183 EEEDEAEEEE-----AEELGHTETYADY---VPSKSKIGKQHPDRVVETSTLSSVPPPDI 234
Query: 1119 QNSLL--EDKTYLDSEERTSIDIVCSEGE 1145
+L D L + + +I C + E
Sbjct: 235 TYTLALPSDSGALSALQLEAITYACQQHE 263
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 33.9 bits (76), Expect = 0.98
Identities = 31/165 (18%), Positives = 66/165 (40%), Gaps = 20/165 (12%)
Query: 309 RSKTVLKRKLEDLPENMRKLAKTSNLSENCHLYEESPQPIGSLGHDADLRRQQQDTCNSG 368
R K ++LEDL + + K N + + S HD DL R+Q +
Sbjct: 1303 RGKLTYTQQLEDLKRQLEEEVKAKNALAHA---------LQSARHDCDLLREQYEEETEA 1353
Query: 369 IADIHRLFNWLSETLANARHSDASLTDTVNKALGLSTDDAYEELRQKHEYELNSTPDKKD 428
A++ R+ + + +A R TD + + + EE ++K L + +
Sbjct: 1354 KAELQRVLSKANSEVAQWRTKYE--TDAIQRT------EELEEAKKKLAQRLQEAEEAVE 1405
Query: 429 YEQPTCAKVENAQFK---GTQSLLLEVDATSKYSVAISTSEVGTD 470
C+ +E + + + L+++V+ ++ + A+ + D
Sbjct: 1406 AVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALDKKQRNFD 1450
>gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens]
Length = 2540
Score = 33.9 bits (76), Expect = 0.98
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 20/130 (15%)
Query: 1048 GANENLESQSALLENDEK----------DEEDMSLDSGDEISHIEVCSNFHSEIWEKETK 1097
G N++L ++ E DEK + D S S E S+ + N + E E K
Sbjct: 343 GKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQKPENELK 402
Query: 1098 --------GSRGT--DQKKNTQIELQSSPDVQNSLLEDKTYLDSEERTSIDIVCSEGENS 1147
G G + +K + L++S + + EDK + ++E+R S+D E
Sbjct: 403 NKNTSKINGEEGKPHNNEKAGEETLKNSQPPWDQIQEDKKHEEAEKRKSVDTQLQEDMII 462
Query: 1148 NSTEQDSYSN 1157
+S+EQ + S+
Sbjct: 463 HSSEQSTVSD 472
>gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens]
Length = 2303
Score = 33.9 bits (76), Expect = 0.98
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 20/130 (15%)
Query: 1048 GANENLESQSALLENDEK----------DEEDMSLDSGDEISHIEVCSNFHSEIWEKETK 1097
G N++L ++ E DEK + D S S E S+ + N + E E K
Sbjct: 124 GKNKHLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQKPENELK 183
Query: 1098 --------GSRGT--DQKKNTQIELQSSPDVQNSLLEDKTYLDSEERTSIDIVCSEGENS 1147
G G + +K + L++S + + EDK + ++E+R S+D E
Sbjct: 184 NKNTSKINGEEGKPHNNEKAGEETLKNSQPPWDQIQEDKKHEEAEKRKSVDTQLQEDMII 243
Query: 1148 NSTEQDSYSN 1157
+S+EQ + S+
Sbjct: 244 HSSEQSTVSD 253
>gi|122937243 dual specificity phosphatase 27 [Homo sapiens]
Length = 1158
Score = 33.5 bits (75), Expect = 1.3
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 1147 SNSTEQDSYSNFQVYHSQLNMSHQFSHFNVLT----HQTFLGTPYALSSSQSQENENYFL 1202
S S EQD+ S + + + + +FS + H+ T SSS+ + E YF
Sbjct: 983 SQSEEQDTSSYHEANGNSVRSTSRFSSSSTREGREMHKFSRSTYNETSSSREESPEPYFF 1042
Query: 1203 SAYTESLDRDKSPPPL--SWGKS 1223
ES +R++SP P +W +S
Sbjct: 1043 RRTPESSEREESPEPQRPNWARS 1065
>gi|110349786 Alstrom syndrome 1 [Homo sapiens]
Length = 4169
Score = 33.5 bits (75), Expect = 1.3
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 425 DKKDYE-QPTCAKVENAQFKGTQSLLLEVDATSKYSVAISTSEVGTDHKLHLKEDPNLIS 483
DKK E T A E AQ K +SL + +S + A +++VG +K P+ +
Sbjct: 3376 DKKQQEIHSTRAVTEAAQAKEKESLQKDTADSSAAAAAEHSAQVGDPE---MKNLPDTKA 3432
Query: 484 VNNFEDCSLCPSVPIEHGFRRQQSKSNNVEETEIH 518
+ E+ +VP E ++S N+EE+E H
Sbjct: 3433 ITQKEEIHRKKTVPEEAWPNNKESLQINIEESECH 3467
>gi|38505280 voltage-dependent calcium channel alpha 1G subunit
isoform 6 [Homo sapiens]
Length = 2306
Score = 33.5 bits (75), Expect = 1.3
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 31/148 (20%)
Query: 656 SAKGGNLPPVSPNDSGAKIASNPLERHVIPVSSSD---FNNKHLLEPLCSDPLKDTNSDE 712
S K G L P + S + + LE IP++ + ++ + EP CS L D + +
Sbjct: 1880 SPKPGALHPAAHARSASHFS---LEHPTIPLAEMEALSLTSEIVSEPSCSLALTDDSLPD 1936
Query: 713 QHSTSALTEVEMNQPQHATELM-----------VTSDHIVP--------GDMAREPVEE- 752
T L+ +E N H TEL V+ H +P G A P+
Sbjct: 1937 DMHTLLLSALESNMQPHPTELPGPDLLTVRKSGVSRTHSLPNDSYMCRHGSTAEGPLGHR 1996
Query: 753 -----TTKSPSDVNISAQPALSNFISQL 775
+S S +++ +QPA +++I QL
Sbjct: 1997 GWGLPKAQSGSVLSVHSQPADTSYILQL 2024
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,386,392
Number of Sequences: 37866
Number of extensions: 2191135
Number of successful extensions: 5795
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 5700
Number of HSP's gapped (non-prelim): 217
length of query: 1233
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1119
effective length of database: 13,930,794
effective search space: 15588558486
effective search space used: 15588558486
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.