| Name: SCLT1 | Sequence: fasta or formatted (688aa) | NCBI GI: 153791839 | |
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Description: sodium channel associated protein 1
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.2 43 2 C cysteine 0.9 6 1 D aspartate 3.3 23 2 E glutamate 15.0 103 3 F phenylalanine 2.2 15 1 G glycine 2.0 14 1 H histidine 1.9 13 1 I isoleucine 4.2 29 2 K lysine 9.3 64 3 L leucine 11.6 80 2 M methionine 2.2 15 1 N asparagine 5.1 35 2 P proline 0.3 2 1 Q glutamine 10.5 72 2 R arginine 7.3 50 2 S serine 5.8 40 2 T threonine 4.8 33 1 V valine 5.5 38 2 W tryptophan 0.3 2 1 Y tyrosine 1.6 11 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 sodium channel associated protein 1 CLIP1 0.073 restin isoform b CLIP1 0.073 restin isoform a CCDC88A 0.071 coiled-coil domain containing 88A isoform 1 MYH6 0.071 myosin heavy chain 6 MYH3 0.070 myosin, heavy chain 3, skeletal muscle, embryonic [H... CCDC88A 0.070 coiled-coil domain containing 88A isoform 2 DSP 0.068 desmoplakin isoform I GOLGA4 0.067 golgi autoantigen, golgin subfamily a, 4 CGNL1 0.066 cingulin-like 1 MYH7 0.065 myosin, heavy chain 7, cardiac muscle, beta MYH8 0.064 myosin, heavy chain 8, skeletal muscle, perinatal [... LOC727832 0.064 golgi autoantigen, golgin subfamily a-like MYH1 0.064 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH10 0.063 myosin, heavy polypeptide 10, non-muscle MYH4 0.063 myosin, heavy polypeptide 4, skeletal muscle SDCCAG8 0.063 serologically defined colon cancer antigen 8 EEA1 0.062 early endosome antigen 1, 162kD CENPE 0.062 centromere protein E CENPF 0.061 centromere protein F CCDC18 0.061 sarcoma antigen NY-SAR-41 MYO18A 0.061 myosin 18A isoform a MYH2 0.061 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.061 myosin, heavy chain 2, skeletal muscle, adult [Homo... CEP110 0.060 centrosomal protein 110kDa MYH13 0.060 myosin, heavy polypeptide 13, skeletal muscle [Homo... GCC2 0.059 GRIP and coiled-coil domain-containing 2 MYH15 0.059 myosin, heavy polypeptide 15 MYH11 0.059 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.059 smooth muscle myosin heavy chain 11 isoform SM1B [Ho...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
