Guide to the Human Genome
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Name: C10orf68 Sequence: fasta or formatted (628aa) NCBI GI: 157739936
Description:

chromosome 10 open reading frame 68

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         20           3
 C cysteine            0.0          0           0
 D aspartate           4.6         29           1
 E glutamate           9.4         59           2
 F phenylalanine       2.5         16           2
 G glycine             4.5         28           1
 H histidine           3.8         24           1
 I isoleucine          6.5         41           3
 K lysine             11.5         72           3
 L leucine             8.3         52           2
 M methionine          1.6         10           1
 N asparagine          3.7         23           1
 P proline             5.1         32           1
 Q glutamine           6.2         39           1
 R arginine            5.1         32           2
 S serine              8.9         56           2
 T threonine           8.6         54           3
 V valine              4.8         30           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.8         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromosome 10 open reading frame 68 
MYH10                 0.025   myosin, heavy polypeptide 10, non-muscle 
AKAP9                 0.024   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.024   A-kinase anchor protein 9 isoform 3 
CCDC88A               0.023   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.023   coiled-coil domain containing 88A isoform 1 
PNN                   0.022   pinin, desmosome associated protein 
TCHH                  0.022   trichohyalin 
MYH13                 0.021   myosin, heavy polypeptide 13, skeletal muscle [Homo...
WDR87                 0.021   NYD-SP11 protein 
MYH9                  0.021   myosin, heavy polypeptide 9, non-muscle 
GOLGB1                0.021   golgi autoantigen, golgin subfamily b, macrogolgin ...
KIF3B                 0.020   kinesin family member 3B 
LOC283685             0.020   PREDICTED: golgi autoantigen, golgin subfamily a-li...
ANKRD26               0.018   ankyrin repeat domain 26 
CDK5RAP2              0.017   CDK5 regulatory subunit associated protein 2 isoform...
CDK5RAP2              0.017   CDK5 regulatory subunit associated protein 2 isoform...
ROCK1                 0.017   Rho-associated, coiled-coil containing protein kinase...
CEP164                0.017   centrosomal protein 164kDa 
CALD1                 0.017   caldesmon 1 isoform 1 
LRRIQ1                0.017   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.017   leucine-rich repeats and IQ motif containing 1 isof...
GOLGA4                0.016   golgi autoantigen, golgin subfamily a, 4 
DSP                   0.016   desmoplakin isoform I 
MYH11                 0.016   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.016   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.016   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.016   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
KIF20B                0.016   M-phase phosphoprotein 1 
EVI5L                 0.016   ecotropic viral integration site 5-like isoform 1 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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