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Search of human proteins with 158186612
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|158186612 transmembrane protein 118 isoform 2 [Homo sapiens]
(420 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|158186612 transmembrane protein 118 isoform 2 [Homo sapiens] 843 0.0
gi|158186614 transmembrane protein 118 isoform 1 [Homo sapiens] 806 0.0
gi|109134327 PTD016 protein [Homo sapiens] 245 6e-65
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 41 0.002
gi|89257348 homeo box HB9 [Homo sapiens] 39 0.007
gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 38 0.015
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 37 0.044
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 37 0.044
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 37 0.044
gi|4507955 YY1 transcription factor [Homo sapiens] 37 0.044
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 36 0.057
gi|61966923 forkhead box B2 [Homo sapiens] 36 0.075
gi|194248068 synaptic Ras GTPase activating protein 1 [Homo sapi... 35 0.098
gi|110578665 seven in absentia homolog 3 [Homo sapiens] 35 0.098
gi|56699482 hypothetical protein LOC25940 [Homo sapiens] 35 0.098
gi|119395716 forkhead box C1 [Homo sapiens] 35 0.17
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 35 0.17
gi|24308179 CTTNBP2 N-terminal like [Homo sapiens] 34 0.22
gi|237649113 Rho-related BTB domain containing 2 isoform 3 [Homo... 34 0.28
gi|237649111 Rho-related BTB domain containing 2 isoform 2 [Homo... 34 0.28
gi|237649109 Rho-related BTB domain containing 2 isoform 1 [Homo... 34 0.28
gi|5031761 homeobox A1 isoform a [Homo sapiens] 34 0.28
gi|84697022 homeobox A1 isoform b [Homo sapiens] 34 0.28
gi|4557595 forkhead box F2 [Homo sapiens] 33 0.48
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 33 0.48
gi|186928827 dermokine isoform 5 precursor [Homo sapiens] 33 0.48
gi|186928825 dermokine isoform 3 precursor [Homo sapiens] 33 0.48
gi|33504489 dermokine isoform 2 precursor [Homo sapiens] 33 0.48
>gi|158186612 transmembrane protein 118 isoform 2 [Homo sapiens]
Length = 420
Score = 843 bits (2179), Expect = 0.0
Identities = 420/420 (100%), Positives = 420/420 (100%)
Query: 1 MWLFTVNQVLRKMQRRHSSNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALF 60
MWLFTVNQVLRKMQRRHSSNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALF
Sbjct: 1 MWLFTVNQVLRKMQRRHSSNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALF 60
Query: 61 SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG 120
SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG
Sbjct: 61 SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG 120
Query: 121 HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQ 180
HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQ
Sbjct: 121 HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQ 180
Query: 181 HKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQL 240
HKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQL
Sbjct: 181 HKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQL 240
Query: 241 YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLV 300
YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLV
Sbjct: 241 YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLV 300
Query: 301 IEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALK 360
IEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALK
Sbjct: 301 IEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALK 360
Query: 361 LLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQMLLKGHKKLELEKIDESAGV 420
LLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQMLLKGHKKLELEKIDESAGV
Sbjct: 361 LLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQMLLKGHKKLELEKIDESAGV 420
>gi|158186614 transmembrane protein 118 isoform 1 [Homo sapiens]
Length = 444
Score = 806 bits (2081), Expect = 0.0
Identities = 400/400 (100%), Positives = 400/400 (100%)
Query: 1 MWLFTVNQVLRKMQRRHSSNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALF 60
MWLFTVNQVLRKMQRRHSSNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALF
Sbjct: 1 MWLFTVNQVLRKMQRRHSSNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALF 60
Query: 61 SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG 120
SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG
Sbjct: 61 SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG 120
Query: 121 HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQ 180
HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQ
Sbjct: 121 HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQ 180
Query: 181 HKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQL 240
HKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQL
Sbjct: 181 HKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQL 240
Query: 241 YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLV 300
YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLV
Sbjct: 241 YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLV 300
Query: 301 IEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALK 360
IEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALK
Sbjct: 301 IEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALK 360
Query: 361 LLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQ 400
LLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQ
Sbjct: 361 LLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQ 400
>gi|109134327 PTD016 protein [Homo sapiens]
Length = 435
Score = 245 bits (625), Expect = 6e-65
Identities = 140/383 (36%), Positives = 216/383 (56%), Gaps = 21/383 (5%)
Query: 28 RNRSQALSSEASVDEGGVFESLKAEAASPPALFSGLSGSLPTSSFPSSLVLGSSAGGGDV 87
R R +A +S + ++ +++ SPP S S P GS GDV
Sbjct: 20 RQRPEAKTSGSEKKYLRAMQANRSQLHSPPGTGSSEDASTPQCVHTRLTGEGSCPHSGDV 79
Query: 88 FIQMPASREEGGGRGEGGAYHHRQPHHHFHHGGHRGGSLLQHVGGDHRGHS-------EE 140
IQ+ + +E + + R H HG V RGHS ++
Sbjct: 80 HIQINSIPKECAENAS--SRNIRSGVHSCAHGC---------VHSRLRGHSHSEARLTDD 128
Query: 141 GGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANS 200
E + + SE + + WLQK LP+ILIL KL QH GI++ IG+ +TF YAN
Sbjct: 129 TAAESGDHGSSSFSEFRYLFKWLQKSLPYILILSVKLVMQHITGISLGIGLLTTFMYANK 188
Query: 201 TLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQLYNSLIFLKPNLEMLDFFDLL 260
++ QV L+E+ S + W+L FLAG+++ + YTF SQ LY SLIFL P L+ L F+++
Sbjct: 189 SIVNQVFLRERSSKIQCAWLLVFLAGSSVLLYYTFHSQSLYYSLIFLNPTLDHLSFWEVF 248
Query: 261 WIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLVIEELSQLFRSLVPIQLWYKY 320
WIVGI DF+LK+ + LKCLI+ +P I+ KSKG +Y+++EEL Q +R+ VPI +W++Y
Sbjct: 249 WIVGITDFILKFFFMGLKCLILLVPSFIMPFKSKGYWYMLLEELCQYYRTFVPIPVWFRY 308
Query: 321 IMGDDSSNS---YFLGGVLIVLYSLCKSFDICGRVGGVRKALKLLCTSQNYGVRATGQQC 377
++ + + LG +L +LY + K + G + R+ L++ T +YGV A+ +QC
Sbjct: 309 LISYGEFGNVTRWSLGILLALLYLILKLLEFFGHLRTFRQVLRIFFTQPSYGVAASKRQC 368
Query: 378 TEAGDICAICQAEFREPLILLCQ 400
++ DIC+ICQAEF++P++L+CQ
Sbjct: 369 SDVDDICSICQAEFQKPILLICQ 391
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 41.2 bits (95), Expect = 0.002
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 43 GGVFESLKAEAASPPALFSGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRG 102
GG E + + G G+ P + P+ VLG + GG + PA R E R
Sbjct: 547 GGHVEVVPVGQQLAICMLHGQLGTAPHAHVPT--VLGGALGGRAGLVAAPA-RRECPARR 603
Query: 103 EGGAYHHRQPHHHFHHGGHRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKA 158
GG + R H GG G L +GG H G + P AP E +A
Sbjct: 604 RGGCWPRRPRRRHGGGGGGGGPGLQDLLGGGHAGGAHGHVVVAPAAAAPTAREGRA 659
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 41.2 bits (95), Expect = 0.002
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Query: 43 GGVFESLKAEAASPPALFSGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRG 102
GG E + + G G+ P + P+ VLG + GG + PA R E R
Sbjct: 547 GGHVEVVPVGQQLAICMLHGQLGTAPHAHVPT--VLGGALGGRAGLVAAPA-RRECPARR 603
Query: 103 EGGAYHHRQPHHHFHHGGHRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKA 158
GG + R H GG G L +GG H G + P AP E +A
Sbjct: 604 RGGCWPRRPRRRHGGGGGGGGPGLQDLLGGGHAGGAHGHVVVAPAAAAPTAREGRA 659
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 11/107 (10%)
Query: 27 ERNRSQALSSEASVDEGGVFESLKAEAASPPAL-------FSGLSGSLPTSSFPSSLVLG 79
+R R ++ S S EG V S + PP + +SSF SL G
Sbjct: 1152 KRGRRNSVGSLDSTIEGSVISSPRPHQRMPPPPPPPPPEEYKSQRPVSNSSSFLGSL-FG 1210
Query: 80 SSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGGHRGGSL 126
S G G + P + + + HH HHH HH GH G L
Sbjct: 1211 SKRGKGPFQMPPPPTGQASASSSSASSTHH---HHHHHHHGHSHGGL 1254
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 39.3 bits (90), Expect = 0.007
Identities = 37/125 (29%), Positives = 45/125 (36%), Gaps = 26/125 (20%)
Query: 31 SQALSSEASVDEGGVFESLKAEAASPPALFSGLSGSLPTSSFPSSLVLGSSAGGGDVFIQ 90
S + S +S + L+AE+ SPP L + LP F LG+ GGG
Sbjct: 55 SGSCSPASSEPPAAPADRLRAESPSPPRLLAAHCALLPKPGF-----LGAGGGGG----- 104
Query: 91 MPASREEGGGRGEGGAYHHRQPHHHFHHG---GHRGGSLLQHVGGDHRGHSEEGGDEQPG 147
G G G GG PHHH H G + GG G G G
Sbjct: 105 -------GTGGGHGG------PHHHAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAG 151
Query: 148 TPAPA 152
PA A
Sbjct: 152 LPAQA 156
>gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
A [Homo sapiens]
Length = 353
Score = 38.1 bits (87), Expect = 0.015
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 10/67 (14%)
Query: 82 AGGGDVFIQMPASREEGGGRGEGG---AYHHRQPHHHFHHGGHRGGSLLQHVGGDHRGHS 138
AGGG + + G G G A+HH HHH HH H GG+ G H
Sbjct: 172 AGGG-------GADDMGAGHHHGAHHAAHHHHAAHHHHHHHHHHGGAGHGGGAGHHVRLE 224
Query: 139 EEGGDEQ 145
E D+Q
Sbjct: 225 ERFSDDQ 231
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 36.6 bits (83), Expect = 0.044
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 19/90 (21%)
Query: 47 ESLKAEAASPPALFSGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGG------- 99
+S+ A A A SG +GS + L+ G AGGG + A R GG
Sbjct: 578 DSVAAAGAGAAAAGSGPAGSRVPAPHHPHLLEGRKAGGGS-YHHSSAFRPVGGKDDAESL 636
Query: 100 ----GRGEGGAY-------HHRQPHHHFHH 118
G G + HH PHHH HH
Sbjct: 637 AKLHGASAGAPHSAQTHPHHHHHPHHHHHH 666
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 36.6 bits (83), Expect = 0.044
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 19/90 (21%)
Query: 47 ESLKAEAASPPALFSGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGG------- 99
+S+ A A A SG +GS + L+ G AGGG + A R GG
Sbjct: 578 DSVAAAGAGAAAAGSGPAGSRVPAPHHPHLLEGRKAGGGS-YHHSSAFRPVGGKDDAESL 636
Query: 100 ----GRGEGGAY-------HHRQPHHHFHH 118
G G + HH PHHH HH
Sbjct: 637 AKLHGASAGAPHSAQTHPHHHHHPHHHHHH 666
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 36.6 bits (83), Expect = 0.044
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 19/90 (21%)
Query: 47 ESLKAEAASPPALFSGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGG------- 99
+S+ A A A SG +GS + L+ G AGGG + A R GG
Sbjct: 578 DSVAAAGAGAAAAGSGPAGSRVPAPHHPHLLEGRKAGGGS-YHHSSAFRPVGGKDDAESL 636
Query: 100 ----GRGEGGAY-------HHRQPHHHFHH 118
G G + HH PHHH HH
Sbjct: 637 AKLHGASAGAPHSAQTHPHHHHHPHHHHHH 666
>gi|4507955 YY1 transcription factor [Homo sapiens]
Length = 414
Score = 36.6 bits (83), Expect = 0.044
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 10/36 (27%)
Query: 83 GGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHH 118
GGGD GGG G G A HH HHH HH
Sbjct: 55 GGGD----------HGGGGGHGHAGHHHHHHHHHHH 80
Score = 33.1 bits (74), Expect = 0.48
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 96 EEGGG--RGEGGAYHHRQPHHHFHHGGH 121
E+GGG G GG + H HHH HH H
Sbjct: 52 EDGGGGDHGGGGGHGHAGHHHHHHHHHH 79
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 36.2 bits (82), Expect = 0.057
Identities = 29/74 (39%), Positives = 32/74 (43%), Gaps = 13/74 (17%)
Query: 79 GSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG---HRGGSLLQHVGGDHR 135
G AGGG EG G GG+ HR PH HGG HR + H G DHR
Sbjct: 822 GMGAGGGH-------RPHEGPGGSMGGSGGHR-PHEGPGHGGPHGHRPHDVPGHRGHDHR 873
Query: 136 G--HSEEGGDEQPG 147
G E G + PG
Sbjct: 874 GPPPHEHRGHDGPG 887
Score = 31.6 bits (70), Expect = 1.4
Identities = 34/105 (32%), Positives = 39/105 (37%), Gaps = 15/105 (14%)
Query: 52 EAASPPALFSGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQ 111
E PP F G G P+ G GG + EG G G G + HR
Sbjct: 714 EPPPPPPPFRGARGGRSGGGPPN----GRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHR- 768
Query: 112 PHHHFHHG---GHR-----GGSLLQHVGGDHRGHSEEGGDEQPGT 148
PH G GHR GGS+ GG HR H GG G+
Sbjct: 769 PHEGPGGGMGSGHRPHEGPGGSM--GGGGGHRPHEGPGGGISGGS 811
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 35.8 bits (81), Expect = 0.075
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 13/61 (21%)
Query: 94 SREEGGGRGEGG---AYHHRQPHHHFHHGGHRGGSLLQHVGGDHRGHSEEGGDEQPGTPA 150
S + G G GG +HH PHHH HH H H H P P
Sbjct: 123 STKSAPGAGPGGHLHPHHHHHPHHHHHH----------HAAAHHHHHHHPPQPPPPPPPP 172
Query: 151 P 151
P
Sbjct: 173 P 173
>gi|194248068 synaptic Ras GTPase activating protein 1 [Homo
sapiens]
Length = 1343
Score = 35.4 bits (80), Expect = 0.098
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 92 PASREEGGGRGEGGAYHHRQPHHHFHHGGHRGGSLLQHVGGDHRGHSEEGGDEQP 146
P GGG G ++HH HHH H GG G G + G +P
Sbjct: 942 PGGHGGGGGHGPPSSHHHHH-HHHHHRGGEPPGDTFAPFHGYSKSEDLSSGVPKP 995
>gi|110578665 seven in absentia homolog 3 [Homo sapiens]
Length = 269
Score = 35.4 bits (80), Expect = 0.098
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 103 EGGAYH-HRQPHHHFHHGGHRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSEL 156
E G++H H HHH HH H L H H H E G P TP + L
Sbjct: 59 EQGSFHPHHLSHHHCHHRHHH--HLRHHAHPHHLHHQEAGLHANPVTPCLCMCPL 111
>gi|56699482 hypothetical protein LOC25940 [Homo sapiens]
Length = 518
Score = 35.4 bits (80), Expect = 0.098
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 9/52 (17%)
Query: 96 EEGGGRGEGGAYHHRQPHHHFHHGGHRGGSLLQHVGGDHRGHSEEGGDEQPG 147
E+GGGRG G Y H GG GG +H GG G S GG Q G
Sbjct: 355 EQGGGRGGRGGYDH---------GGRGGGRGNKHQGGWTDGGSGGGGGYQDG 397
>gi|119395716 forkhead box C1 [Homo sapiens]
Length = 553
Score = 34.7 bits (78), Expect = 0.17
Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 13/102 (12%)
Query: 31 SQALSSEASVDEGGVFESLKAEAASPPALFSGLSGSLPTSSFPSSLVLGSSAGGGDVFIQ 90
S L+S A+ G+ L A SP SL +S + GSS GGG
Sbjct: 330 SGLLASAAASSRAGIAPPLALGAYSPG------QSSLYSSPCSQTSSAGSSGGGG----- 378
Query: 91 MPASREEGGGRGEGGAYHHRQPHHHFHHGGHRGGSLLQHVGG 132
GG G G YH + G RGG L GG
Sbjct: 379 --GGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGG 418
Score = 28.9 bits (63), Expect = 9.1
Identities = 30/102 (29%), Positives = 37/102 (36%), Gaps = 18/102 (17%)
Query: 32 QALSSEASVDEGGVFESLKAEAASPPALFSGLSGSLPTSSFPSSLVLGSSAGGGDVFIQM 91
QA+S A+ + GG + A S + LP S P V SS+
Sbjct: 398 QAMSLYAAGERGGHLQGAPGGAGG-----SAVDDPLPDYSLPP--VTSSSS--------- 441
Query: 92 PASREEGGGRGEGGAYHHRQPHHHFHHGGHRGGSLLQHVGGD 133
+S GGG G GG HH H G L GGD
Sbjct: 442 -SSLSHGGGGGGGGG-GQEAGHHPAAHQGRLTSWYLNQAGGD 481
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 34.7 bits (78), Expect = 0.17
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 105 GAYHHRQPHHHFHHGGHRG--GSLLQHV 130
G +HH HHH HH H+ G LL+H+
Sbjct: 169 GTHHHHHHHHHHHHQPHQALEGELLEHL 196
>gi|24308179 CTTNBP2 N-terminal like [Homo sapiens]
Length = 639
Score = 34.3 bits (77), Expect = 0.22
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 19 SNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALFSGLSGSLPTSSFPSSL 76
+N +N P R +S AL+ E V+ GG ++ P L S S P+S+ SSL
Sbjct: 366 NNVENQVPPREKSVALAQEKPVENGGCPVGIETPVPMPSPLSSSGSSLSPSSTASSSL 423
>gi|237649113 Rho-related BTB domain containing 2 isoform 3 [Homo
sapiens]
Length = 727
Score = 33.9 bits (76), Expect = 0.28
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Query: 80 SSAGGGDVFIQMPASREEGGGRGEGGAYH------HRQPHHHFHHGGHRGGSLLQHVGGD 133
SS+ D+F+ M S E GG E G H H HHH HH H LL+ D
Sbjct: 288 SSSKFYDLFL-MDLSEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFD 346
Query: 134 HRGHSEEGGDEQP 146
+E G P
Sbjct: 347 VCESVDEAGGSGP 359
>gi|237649111 Rho-related BTB domain containing 2 isoform 2 [Homo
sapiens]
Length = 734
Score = 33.9 bits (76), Expect = 0.28
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Query: 80 SSAGGGDVFIQMPASREEGGGRGEGGAYH------HRQPHHHFHHGGHRGGSLLQHVGGD 133
SS+ D+F+ M S E GG E G H H HHH HH H LL+ D
Sbjct: 295 SSSKFYDLFL-MDLSEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFD 353
Query: 134 HRGHSEEGGDEQP 146
+E G P
Sbjct: 354 VCESVDEAGGSGP 366
>gi|237649109 Rho-related BTB domain containing 2 isoform 1 [Homo
sapiens]
Length = 749
Score = 33.9 bits (76), Expect = 0.28
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Query: 80 SSAGGGDVFIQMPASREEGGGRGEGGAYH------HRQPHHHFHHGGHRGGSLLQHVGGD 133
SS+ D+F+ M S E GG E G H H HHH HH H LL+ D
Sbjct: 310 SSSKFYDLFL-MDLSEGELGGPSEPGGTHPEDHQGHSDQHHHHHHHHHGRDFLLRAASFD 368
Query: 134 HRGHSEEGGDEQP 146
+E G P
Sbjct: 369 VCESVDEAGGSGP 381
>gi|5031761 homeobox A1 isoform a [Homo sapiens]
Length = 335
Score = 33.9 bits (76), Expect = 0.28
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 18/71 (25%)
Query: 57 PALFSGLSGSLPTSSFPSS---------LVLGSSAGGGDVFIQMPASREEGGGRGEGGAY 107
P L SG SG+ ++PS V +S GG D F+ G G G +
Sbjct: 13 PILSSGDSGTCSARAYPSDHRITTFQSCAVSANSCGGDDRFLV-------GRGVQIGSPH 65
Query: 108 HHRQPHHHFHH 118
HH HHH HH
Sbjct: 66 HHH--HHHHHH 74
>gi|84697022 homeobox A1 isoform b [Homo sapiens]
Length = 137
Score = 33.9 bits (76), Expect = 0.28
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 18/71 (25%)
Query: 57 PALFSGLSGSLPTSSFPSS---------LVLGSSAGGGDVFIQMPASREEGGGRGEGGAY 107
P L SG SG+ ++PS V +S GG D F+ G G G +
Sbjct: 13 PILSSGDSGTCSARAYPSDHRITTFQSCAVSANSCGGDDRFLV-------GRGVQIGSPH 65
Query: 108 HHRQPHHHFHH 118
HH HHH HH
Sbjct: 66 HHH--HHHHHH 74
>gi|4557595 forkhead box F2 [Homo sapiens]
Length = 444
Score = 33.1 bits (74), Expect = 0.48
Identities = 24/62 (38%), Positives = 25/62 (40%), Gaps = 10/62 (16%)
Query: 62 GLSGSLPTSSF----PSSLVLGS-SAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHF 116
G SL F P S LG S GG MPA + G G A H PHHH
Sbjct: 215 GFGASLLPQGFDFQAPPSAPLGCHSQGGYGGLDMMPAGYDAGAG-----APSHAHPHHHH 269
Query: 117 HH 118
HH
Sbjct: 270 HH 271
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 33.1 bits (74), Expect = 0.48
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 61 SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG 120
SG +G S GSS+GG +S GG RG+ G+ G
Sbjct: 257 SGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGS--------ESSWGS 308
Query: 121 HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSE 155
G S H GG G+ + G E+PG A E
Sbjct: 309 STGSSSGNH-GGSGGGNGHKPGCEKPGNEARGSGE 342
>gi|186928827 dermokine isoform 5 precursor [Homo sapiens]
Length = 398
Score = 33.1 bits (74), Expect = 0.48
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 61 SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG 120
SG +G S GSS+GG +S GG RG+ G+ G
Sbjct: 257 SGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGS--------ESSWGS 308
Query: 121 HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSE 155
G S H GG G+ + G E+PG A E
Sbjct: 309 STGSSSGNH-GGSGGGNGHKPGCEKPGNEARGSGE 342
>gi|186928825 dermokine isoform 3 precursor [Homo sapiens]
Length = 416
Score = 33.1 bits (74), Expect = 0.48
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 61 SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG 120
SG +G S GSS+GG +S GG RG+ G+ G
Sbjct: 257 SGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGS--------ESSWGS 308
Query: 121 HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSE 155
G S H GG G+ + G E+PG A E
Sbjct: 309 STGSSSGNH-GGSGGGNGHKPGCEKPGNEARGSGE 342
>gi|33504489 dermokine isoform 2 precursor [Homo sapiens]
Length = 476
Score = 33.1 bits (74), Expect = 0.48
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 61 SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG 120
SG +G S GSS+GG +S GG RG+ G+ G
Sbjct: 257 SGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGS--------ESSWGS 308
Query: 121 HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSE 155
G S H GG G+ + G E+PG A E
Sbjct: 309 STGSSSGNH-GGSGGGNGHKPGCEKPGNEARGSGE 342
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,701,136
Number of Sequences: 37866
Number of extensions: 833040
Number of successful extensions: 3839
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 3385
Number of HSP's gapped (non-prelim): 303
length of query: 420
length of database: 18,247,518
effective HSP length: 105
effective length of query: 315
effective length of database: 14,271,588
effective search space: 4495550220
effective search space used: 4495550220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.