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Search of human proteins with 157676334
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157676334 transmembrane protein 8 (five membrane-spanning
domains) [Homo sapiens]
(771 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157676334 transmembrane protein 8 (five membrane-spanning dom... 1584 0.0
gi|110556646 transmembrane protein 8B isoform a [Homo sapiens] 421 e-117
gi|110556642 transmembrane protein 8B isoform a [Homo sapiens] 421 e-117
gi|27552764 transmembrane protein 8B isoform b [Homo sapiens] 212 9e-55
gi|122937402 transmembrane protein 8C [Homo sapiens] 116 9e-26
gi|153946395 tenascin C precursor [Homo sapiens] 34 0.59
gi|19924165 proto-oncogene c-ros-1 protein precursor [Homo sapiens] 34 0.59
gi|157427675 ADAM metallopeptidase with thrombospondin type 1 mo... 33 1.0
gi|116805350 homeo box (H6 family) 1 [Homo sapiens] 33 1.0
gi|156546888 F-box protein 40 [Homo sapiens] 33 1.3
gi|142976733 surface glycoprotein, Ig superfamily member [Homo s... 33 1.3
gi|38505226 E2F family member 8 [Homo sapiens] 32 2.9
gi|31542713 MOCO sulphurase C-terminal domain containing 2 [Homo... 32 2.9
gi|54792146 tripartite motif-containing 47 [Homo sapiens] 31 5.0
gi|126091152 cubilin [Homo sapiens] 30 6.5
gi|15147240 brother of CDO [Homo sapiens] 30 6.5
gi|46409340 ankyrin repeat domain 13 family, member D [Homo sapi... 30 6.5
gi|236461846 neuregulin 1 isoform ndf43c [Homo sapiens] 30 8.5
gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains) ... 30 8.5
gi|14192943 multiple EGF-like-domains 10 [Homo sapiens] 30 8.5
gi|224451128 eyes shut homolog isoform 1 [Homo sapiens] 30 8.5
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 30 8.5
gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens] 30 8.5
>gi|157676334 transmembrane protein 8 (five membrane-spanning
domains) [Homo sapiens]
Length = 771
Score = 1584 bits (4101), Expect = 0.0
Identities = 771/771 (100%), Positives = 771/771 (100%)
Query: 1 MGRAGTGTGGEAVAAVVAGPLLLLLLARPPPASAGYSGKSEVGLVSEHFSQAPQRLSFYS 60
MGRAGTGTGGEAVAAVVAGPLLLLLLARPPPASAGYSGKSEVGLVSEHFSQAPQRLSFYS
Sbjct: 1 MGRAGTGTGGEAVAAVVAGPLLLLLLARPPPASAGYSGKSEVGLVSEHFSQAPQRLSFYS 60
Query: 61 WYGSARLFRFRVPPDAVLLRWLLQVSRESGAACTDAEITVHFRSGAPPVINPLGTSFPDD 120
WYGSARLFRFRVPPDAVLLRWLLQVSRESGAACTDAEITVHFRSGAPPVINPLGTSFPDD
Sbjct: 61 WYGSARLFRFRVPPDAVLLRWLLQVSRESGAACTDAEITVHFRSGAPPVINPLGTSFPDD 120
Query: 121 TAVQPSFQVGVPLSTTPRSNASVNVSHPAPGDWFVAAHLPPSSQKIELKGLAPTCAYVFQ 180
TAVQPSFQVGVPLSTTPRSNASVNVSHPAPGDWFVAAHLPPSSQKIELKGLAPTCAYVFQ
Sbjct: 121 TAVQPSFQVGVPLSTTPRSNASVNVSHPAPGDWFVAAHLPPSSQKIELKGLAPTCAYVFQ 180
Query: 181 PELLVTRVVEISIMEPDVPLPQTLLSHPSYLKVFVPDYTRELLLELRDCVSNGSLGCPVR 240
PELLVTRVVEISIMEPDVPLPQTLLSHPSYLKVFVPDYTRELLLELRDCVSNGSLGCPVR
Sbjct: 181 PELLVTRVVEISIMEPDVPLPQTLLSHPSYLKVFVPDYTRELLLELRDCVSNGSLGCPVR 240
Query: 241 LTVGPVTLPSNFQKVLTCTGAPWPCRLLLPSPPWDRWLQVTAESLVGPLGTVAFSAVAAL 300
LTVGPVTLPSNFQKVLTCTGAPWPCRLLLPSPPWDRWLQVTAESLVGPLGTVAFSAVAAL
Sbjct: 241 LTVGPVTLPSNFQKVLTCTGAPWPCRLLLPSPPWDRWLQVTAESLVGPLGTVAFSAVAAL 300
Query: 301 TACRPRSVTIQPLLQSSQNQSFNASSGLLSPSPDHQDLGRSGRVDRSPFCLTNYPVTRED 360
TACRPRSVTIQPLLQSSQNQSFNASSGLLSPSPDHQDLGRSGRVDRSPFCLTNYPVTRED
Sbjct: 301 TACRPRSVTIQPLLQSSQNQSFNASSGLLSPSPDHQDLGRSGRVDRSPFCLTNYPVTRED 360
Query: 361 MDVVSVHFQPLDRVSVRVCSDTPSVMRLRLNTGMDSGGSLTISLRANKTEMRNETVVVAC 420
MDVVSVHFQPLDRVSVRVCSDTPSVMRLRLNTGMDSGGSLTISLRANKTEMRNETVVVAC
Sbjct: 361 MDVVSVHFQPLDRVSVRVCSDTPSVMRLRLNTGMDSGGSLTISLRANKTEMRNETVVVAC 420
Query: 421 VNAASPFLGFNTSLNCTTAFFQGYPLSLSAWSRRANLIIPYPETDNWYLSLQLMCPENAE 480
VNAASPFLGFNTSLNCTTAFFQGYPLSLSAWSRRANLIIPYPETDNWYLSLQLMCPENAE
Sbjct: 421 VNAASPFLGFNTSLNCTTAFFQGYPLSLSAWSRRANLIIPYPETDNWYLSLQLMCPENAE 480
Query: 481 DCEQAVVHVETTLYLVPCLNDCGPYGQCLLLRRHSYLYASCSCKAGWRGWSCTDNSTAQT 540
DCEQAVVHVETTLYLVPCLNDCGPYGQCLLLRRHSYLYASCSCKAGWRGWSCTDNSTAQT
Sbjct: 481 DCEQAVVHVETTLYLVPCLNDCGPYGQCLLLRRHSYLYASCSCKAGWRGWSCTDNSTAQT 540
Query: 541 VAQQRAATLLLTLSNLMFLAPIAVSVRRFFLVEASVYAYTMFFSTFYHACDQPGEAVLCI 600
VAQQRAATLLLTLSNLMFLAPIAVSVRRFFLVEASVYAYTMFFSTFYHACDQPGEAVLCI
Sbjct: 541 VAQQRAATLLLTLSNLMFLAPIAVSVRRFFLVEASVYAYTMFFSTFYHACDQPGEAVLCI 600
Query: 601 LSYDTLQYCDFLGSGAAIWVTILCMARLKTVLKYVLFLLGTLVIAMSLQLDRRGMWNMLG 660
LSYDTLQYCDFLGSGAAIWVTILCMARLKTVLKYVLFLLGTLVIAMSLQLDRRGMWNMLG
Sbjct: 601 LSYDTLQYCDFLGSGAAIWVTILCMARLKTVLKYVLFLLGTLVIAMSLQLDRRGMWNMLG 660
Query: 661 PCLFAFVIMASMWAYRCGHRRQCYPTSWQRWAFYLLPGVSMASVGIAIYTSMMTSDNYYY 720
PCLFAFVIMASMWAYRCGHRRQCYPTSWQRWAFYLLPGVSMASVGIAIYTSMMTSDNYYY
Sbjct: 661 PCLFAFVIMASMWAYRCGHRRQCYPTSWQRWAFYLLPGVSMASVGIAIYTSMMTSDNYYY 720
Query: 721 THSIWHILLAGSAALLLPPPDQPAEPWACSQKFPCHYQICKNDREELYAVT 771
THSIWHILLAGSAALLLPPPDQPAEPWACSQKFPCHYQICKNDREELYAVT
Sbjct: 721 THSIWHILLAGSAALLLPPPDQPAEPWACSQKFPCHYQICKNDREELYAVT 771
>gi|110556646 transmembrane protein 8B isoform a [Homo sapiens]
Length = 472
Score = 421 bits (1083), Expect = e-117
Identities = 208/447 (46%), Positives = 283/447 (63%), Gaps = 10/447 (2%)
Query: 329 LSPSPDHQDLGRSGRVDRSP--FCLTNYPVTREDMDVVSVHFQPLDRVSVRVCSDTPSVM 386
L P P G SP C P R ++D SVHF SV + + P+V
Sbjct: 12 LPPEPPSLGTPAEGPGTTSPPEHCWPVRPTLRNELDTFSVHFYIFFGPSVALPPERPAVF 71
Query: 387 RLRLNTGMDSGGSLTISLRANKTEMRNETVVV-ACVNAASPFLGFNTSLNCTTAFFQGYP 445
+RL +DSGG L++ L+ N + +R E V V C+ P + ++ C+ G+
Sbjct: 72 AMRLLPVLDSGGVLSLELQLNASSVRQENVTVFGCLTHEVPLSLGDAAVTCSKESLAGFL 131
Query: 446 LSLSAWSRRANLIIPYPETDNWYLSLQLMCPENAE--DCEQAVVHVETTLYLVPCLNDCG 503
LS+SA +R A L IP+P+T W+L+L+ +C C A V +L PC++DCG
Sbjct: 132 LSVSATTRVARLRIPFPQTGTWFLALRSLCGVGPRFVRCRNATAEVRMRTFLSPCVDDCG 191
Query: 504 PYGQCLLLRRHSYLYASCSCKAGWRGWSCTDNSTAQTVAQQRAATLLLTLSNLMFLAPIA 563
PYGQC LLR H+YLYA+C CKAGWRGW CTD++ A T Q +TLLL LSNLMFL P+
Sbjct: 192 PYGQCKLLRTHNYLYAACECKAGWRGWGCTDSADALTYGFQLLSTLLLCLSNLMFLPPVV 251
Query: 564 VSVRRFFLVEASVYAYTMFFSTFYHACDQPGEAVLCILSYDTLQYCDFLGSGAAIWVTIL 623
+++R +++EA+VY +TMFFSTFYHACDQPG V CI+ YD LQ+CDFLGS ++WVT++
Sbjct: 252 LAIRSRYVLEAAVYTFTMFFSTFYHACDQPGIVVFCIMDYDVLQFCDFLGSLMSVWVTVI 311
Query: 624 CMARLKTVLKYVLFLLGTLVIAMSLQLDRRGMWNMLGPCLFAFVIMASMWAYRCGHRRQC 683
MARL+ V+K VL+LLG ++++M+LQLDR G+WN+LGP LFA I+A+ W R RR C
Sbjct: 312 AMARLQPVVKQVLYLLGAMLLSMALQLDRHGLWNLLGPSLFALGILATAWTVRSVRRRHC 371
Query: 684 YPTSWQRWAFYLLPGVSMASVGIAIYTSMMTSDNYYYTHSIWHILLAGSAALLLPP---P 740
YP +W+RW FYL PG +A + +Y + T DNY+Y HSIWH+L+AGS LLPP
Sbjct: 372 YPPTWRRWLFYLCPGSLIAGSAVLLYAFVETRDNYFYIHSIWHMLIAGSVGFLLPPRAKT 431
Query: 741 DQPAEPWACSQKFPCHYQICKNDREEL 767
D A ++ C YQ+C N++EEL
Sbjct: 432 DHGVPSGARAR--GCGYQLCINEQEEL 456
>gi|110556642 transmembrane protein 8B isoform a [Homo sapiens]
Length = 472
Score = 421 bits (1083), Expect = e-117
Identities = 208/447 (46%), Positives = 283/447 (63%), Gaps = 10/447 (2%)
Query: 329 LSPSPDHQDLGRSGRVDRSP--FCLTNYPVTREDMDVVSVHFQPLDRVSVRVCSDTPSVM 386
L P P G SP C P R ++D SVHF SV + + P+V
Sbjct: 12 LPPEPPSLGTPAEGPGTTSPPEHCWPVRPTLRNELDTFSVHFYIFFGPSVALPPERPAVF 71
Query: 387 RLRLNTGMDSGGSLTISLRANKTEMRNETVVV-ACVNAASPFLGFNTSLNCTTAFFQGYP 445
+RL +DSGG L++ L+ N + +R E V V C+ P + ++ C+ G+
Sbjct: 72 AMRLLPVLDSGGVLSLELQLNASSVRQENVTVFGCLTHEVPLSLGDAAVTCSKESLAGFL 131
Query: 446 LSLSAWSRRANLIIPYPETDNWYLSLQLMCPENAE--DCEQAVVHVETTLYLVPCLNDCG 503
LS+SA +R A L IP+P+T W+L+L+ +C C A V +L PC++DCG
Sbjct: 132 LSVSATTRVARLRIPFPQTGTWFLALRSLCGVGPRFVRCRNATAEVRMRTFLSPCVDDCG 191
Query: 504 PYGQCLLLRRHSYLYASCSCKAGWRGWSCTDNSTAQTVAQQRAATLLLTLSNLMFLAPIA 563
PYGQC LLR H+YLYA+C CKAGWRGW CTD++ A T Q +TLLL LSNLMFL P+
Sbjct: 192 PYGQCKLLRTHNYLYAACECKAGWRGWGCTDSADALTYGFQLLSTLLLCLSNLMFLPPVV 251
Query: 564 VSVRRFFLVEASVYAYTMFFSTFYHACDQPGEAVLCILSYDTLQYCDFLGSGAAIWVTIL 623
+++R +++EA+VY +TMFFSTFYHACDQPG V CI+ YD LQ+CDFLGS ++WVT++
Sbjct: 252 LAIRSRYVLEAAVYTFTMFFSTFYHACDQPGIVVFCIMDYDVLQFCDFLGSLMSVWVTVI 311
Query: 624 CMARLKTVLKYVLFLLGTLVIAMSLQLDRRGMWNMLGPCLFAFVIMASMWAYRCGHRRQC 683
MARL+ V+K VL+LLG ++++M+LQLDR G+WN+LGP LFA I+A+ W R RR C
Sbjct: 312 AMARLQPVVKQVLYLLGAMLLSMALQLDRHGLWNLLGPSLFALGILATAWTVRSVRRRHC 371
Query: 684 YPTSWQRWAFYLLPGVSMASVGIAIYTSMMTSDNYYYTHSIWHILLAGSAALLLPP---P 740
YP +W+RW FYL PG +A + +Y + T DNY+Y HSIWH+L+AGS LLPP
Sbjct: 372 YPPTWRRWLFYLCPGSLIAGSAVLLYAFVETRDNYFYIHSIWHMLIAGSVGFLLPPRAKT 431
Query: 741 DQPAEPWACSQKFPCHYQICKNDREEL 767
D A ++ C YQ+C N++EEL
Sbjct: 432 DHGVPSGARAR--GCGYQLCINEQEEL 456
>gi|27552764 transmembrane protein 8B isoform b [Homo sapiens]
Length = 338
Score = 212 bits (540), Expect = 9e-55
Identities = 121/299 (40%), Positives = 167/299 (55%), Gaps = 22/299 (7%)
Query: 329 LSPSPDHQDLGRSGRVDRSP--FCLTNYPVTREDMDVVSVHFQPLDRVSVRVCSDTPSVM 386
L P P G SP C P R ++D SVHF SV + + P+V
Sbjct: 12 LPPEPPSLGTPAEGPGTTSPPEHCWPVRPTLRNELDTFSVHFYIFFGPSVALPPERPAVF 71
Query: 387 RLRLNTGMDSGGSLTISLRANKTEMRNETVVV-ACVNAASPFLGFNTSLNCTTAFFQGYP 445
+RL +DSGG L++ L+ N + +R E V V C+ P + ++ C+ G+
Sbjct: 72 AMRLLPVLDSGGVLSLELQLNASSVRQENVTVFGCLTHEVPLSLGDAAVTCSKESLAGFL 131
Query: 446 LSLSAWSRRANLIIPYPETDNWYLSLQLMCPENAE--DCEQAVVHVETTLYLVPCLNDCG 503
LS+SA +R A L IP+P+T W+L+L+ +C C A V +L PC++DCG
Sbjct: 132 LSVSATTRVARLRIPFPQTGTWFLALRSLCGVGPRFVRCRNATAEVRMRTFLSPCVDDCG 191
Query: 504 PYGQCLLLRRHSYLYASCSCKAGWRGWSCTDNSTAQTVAQQRAATLLLTLSNLMFLAPIA 563
PYGQC LLR H+YLYA+C CKAGWRGW CTD++ A T Q +TLLL LSNLMFL P+
Sbjct: 192 PYGQCKLLRTHNYLYAACECKAGWRGWGCTDSADALTYGFQLLSTLLLCLSNLMFLPPVV 251
Query: 564 VSVRRFFLVEASVYAYTMFFSTFYHACDQPGEAVLCILSYDTLQYCDFLGSGAAIWVTI 622
+++R +++EA+VY +TMFFST C +CILS LG+ A WVT+
Sbjct: 252 LAIRSRYVLEAAVYTFTMFFST---VC-----GGVCILS---------LGACAWWWVTV 293
>gi|122937402 transmembrane protein 8C [Homo sapiens]
Length = 221
Score = 116 bits (290), Expect = 9e-26
Identities = 67/215 (31%), Positives = 109/215 (50%), Gaps = 2/215 (0%)
Query: 546 AATLLLTLSNLMFLAPIAVSVRRFFLVEASVYAYTMFFSTFYHACDQPGEAVLCILSYDT 605
A LL TLS+L FL ++++ +R F +EA VY +T+FF +HAC+ PG +VLC + +D
Sbjct: 6 AKLLLPTLSSLAFLPTVSIAAKRRFHMEAMVYLFTLFFVALHHACNGPGLSVLCFMRHDI 65
Query: 606 LQYCDFLGSGAAIWVTILCMARLKTVLKYVLFLLGTLVIAMSLQLDRRGMWNMLGPCLFA 665
L+Y G+ ++WV+++ +A + + G L IA+ + DR G GP A
Sbjct: 66 LEYFSVYGTALSMWVSLMALADFDEPKRSTFVMFGVLTIAVRIYHDRWGYGVYSGPIGTA 125
Query: 666 FVIMASMWAYRCGHRRQCYPTSWQRWAFYLLPGVSMASVGIAIYTSMMTSDNYYYTHSIW 725
+I+A+ W + ++ YP + + PG+ ++ + + D Y Y HS +
Sbjct: 126 ILIIAAKWLQKMKEKKGLYPDK-SVYTQQIGPGLCFGALALMLRFFFEDWD-YTYVHSFY 183
Query: 726 HILLAGSAALLLPPPDQPAEPWACSQKFPCHYQIC 760
H LA S LLLP ++ A K C C
Sbjct: 184 HCALAMSFVLLLPKVNKKAGSPGTPAKLDCSTLCC 218
>gi|153946395 tenascin C precursor [Homo sapiens]
Length = 2201
Score = 33.9 bits (76), Expect = 0.59
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 21/67 (31%)
Query: 472 QLMCPEN--AEDCEQAVVHVETTLYLVPCLNDCGPYGQCLLLRRHSYLYASCSCKAGWRG 529
Q +C E EDC Q + C NDC G+C+ C C+ G++G
Sbjct: 422 QCVCDEGYTGEDCSQ-----------LRCPNDCHSRGRCV--------EGKCVCEQGFKG 462
Query: 530 WSCTDNS 536
+ C+D S
Sbjct: 463 YDCSDMS 469
>gi|19924165 proto-oncogene c-ros-1 protein precursor [Homo sapiens]
Length = 2347
Score = 33.9 bits (76), Expect = 0.59
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 18/92 (19%)
Query: 89 SGAACTDAEITVHFRSGAPPVINPLGTSFPDDTAVQPSFQVGVPLSTTPRSNASVNVSHP 148
SG C E+ V FR P + V F++ +S +N +
Sbjct: 1054 SGKCCNKNEVVVEFRWNKPK----------HENGVLTKFEIFYNISNQSITNKTCE---- 1099
Query: 149 APGDWFVAAHLPPSSQKIELKGLAPTCAYVFQ 180
DW +A ++ PS +L+G++P C FQ
Sbjct: 1100 ---DW-IAVNVTPSVMSFQLEGMSPRCFIAFQ 1127
>gi|157427675 ADAM metallopeptidase with thrombospondin type 1
motif, 4 preproprotein [Homo sapiens]
Length = 837
Score = 33.1 bits (74), Expect = 1.0
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 16/82 (19%)
Query: 72 VPPDAVLLRWLLQVSRESGAACTDAEITVHFRSGAPPVINPLGTSFPDDTAVQPSFQVGV 131
V P AV LR+ SGA ++ H P + L P DT ++ SF V
Sbjct: 752 VLPGAVSLRY-------SGATAASETLSGHGPLAQPLTLQVLVAGNPQDTRLRYSFFVPR 804
Query: 132 PLSTTPRSNASVNVSHPAPGDW 153
P +TPR P P DW
Sbjct: 805 PTPSTPR---------PTPQDW 817
>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
Length = 348
Score = 33.1 bits (74), Expect = 1.0
Identities = 17/28 (60%), Positives = 18/28 (64%)
Query: 4 AGTGTGGEAVAAVVAGPLLLLLLARPPP 31
AGTG GGEA A + GP L L RPPP
Sbjct: 73 AGTGPGGEARARALLGPGALGLGPRPPP 100
>gi|156546888 F-box protein 40 [Homo sapiens]
Length = 709
Score = 32.7 bits (73), Expect = 1.3
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 462 PETDNWYLSLQLMCPENAEDCEQAVVHVETTLYLVPCLNDCGPYGQCLLLRRHSYL---- 517
P T +S L+C C++A + L VPCLN YG L + RH
Sbjct: 29 PNTSCLVISCHLLCGATFHMCKEAEHQLLCPLEQVPCLN--SEYGCPLSMSRHKLAKHLQ 86
Query: 518 ---YASCSCKAGWRGWSCTDNST 537
+ C W W D+ T
Sbjct: 87 VCPASVVCCSMEWNRWPNVDSET 109
>gi|142976733 surface glycoprotein, Ig superfamily member [Homo
sapiens]
Length = 1264
Score = 32.7 bits (73), Expect = 1.3
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 118 PDDTAVQPSFQVGVPLSTTPRSNAS-------VNVSHPAPGDWFVAAH-LPPSSQKIELK 169
PD + + + V ++ PR+N V +W VAA +PPS +E++
Sbjct: 724 PDRPTISTASETSVYVTWIPRANGGSPITAFKVEYKRMRTSNWLVAAEDIPPSKLSVEVR 783
Query: 170 GLAPTCAYVFQ 180
L P Y F+
Sbjct: 784 SLEPGSTYKFR 794
>gi|38505226 E2F family member 8 [Homo sapiens]
Length = 867
Score = 31.6 bits (70), Expect = 2.9
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 253 QKVLTCTGAPWPCRLLLP-SPPWDRWLQVTAESLVGPLGTVAF------SAVAALTACRP 305
QKV PC+ + P PP + +++TA SL+ PLG V SAV + P
Sbjct: 457 QKVKVQLARSGPCKPVAPLDPPVNAEMELTAPSLIQPLGMVPLIPSPLSSAVPLILPQAP 516
Query: 306 RSVTIQPLLQSSQ-NQSFNASSGL 328
+ LQ +Q +QS GL
Sbjct: 517 SGPSYAIYLQPTQAHQSVTPPQGL 540
>gi|31542713 MOCO sulphurase C-terminal domain containing 2 [Homo
sapiens]
Length = 335
Score = 31.6 bits (70), Expect = 2.9
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 266 RLLLPSPPWDRWLQVTAESLVG-PLGTVAF 294
RL LP+ PW RWL V A L LGTVA+
Sbjct: 11 RLGLPARPWPRWLGVAALGLAAVALGTVAW 40
>gi|54792146 tripartite motif-containing 47 [Homo sapiens]
Length = 638
Score = 30.8 bits (68), Expect = 5.0
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 232 NGSLGCPVRLTV--GPVTLPSNFQKVLTCTGAPWPCR 266
+G CP+ L PVTLP L C GA WP R
Sbjct: 4 SGPFSCPICLEPLREPVTLPCGHNFCLACLGALWPHR 40
>gi|126091152 cubilin [Homo sapiens]
Length = 3623
Score = 30.4 bits (67), Expect = 6.5
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 9/39 (23%)
Query: 497 PCLNDCGPYGQCLLLRRHSYLYASCSCKAGWRGWSCTDN 535
PCLN GQC+ + C C +GW G +CT+N
Sbjct: 403 PCLN-----GQCIDTVSGYF----CKCDSGWTGVNCTEN 432
>gi|15147240 brother of CDO [Homo sapiens]
Length = 1114
Score = 30.4 bits (67), Expect = 6.5
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 118 PDDTAVQPSFQVGVPLSTTPRSNASVNVSH--------PAPGDWFVAAH-LPPSSQKIEL 168
PD + + + V ++ PR N + GDW +A +PPS +E+
Sbjct: 609 PDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEI 668
Query: 169 KGLAPTCAYVFQPELL 184
GL +Y F+ L
Sbjct: 669 TGLEKGTSYKFRVRAL 684
>gi|46409340 ankyrin repeat domain 13 family, member D [Homo
sapiens]
Length = 518
Score = 30.4 bits (67), Expect = 6.5
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Query: 59 YSWYGSARLFRFRVPPDAVLLRWLLQVSRESGAACTDA---EITVHFRSGAPPVINPLGT 115
YS G R R D +L + Q E+G E + R GA P P T
Sbjct: 381 YSVLGMERNEPLRDEDDDLLQFAIQQSLLEAGTEAEQVTVWEALTNTRPGARPP--PQAT 438
Query: 116 SFPDDTAVQPSFQVGVPLSTTPRSNASVNVSHPAPG 151
+ + ++ + Q + LST PR S + PAPG
Sbjct: 439 VYEEQLQLERALQESLQLSTEPRGPGSPPRTPPAPG 474
>gi|236461846 neuregulin 1 isoform ndf43c [Homo sapiens]
Length = 308
Score = 30.0 bits (66), Expect = 8.5
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 11/78 (14%)
Query: 480 EDCEQAVVHVETTLYLVPCLND----CGPYGQCLLLRRHS----YLYASCSCKAGWRGWS 531
ED T +LV C C G+C +++ S YL C C+ G+ G
Sbjct: 10 EDITATSTSTTGTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYL---CKCQPGFTGAR 66
Query: 532 CTDNSTAQTVAQQRAATL 549
CT+N + Q++A L
Sbjct: 67 CTENVPMKVQNQEKAEEL 84
>gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains)
[Homo sapiens]
Length = 494
Score = 30.0 bits (66), Expect = 8.5
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 13/40 (32%)
Query: 498 CLND-----CGPYGQCLLLRRHSYLYASCSCKAGWRGWSC 532
C++D CG +G+C +C CKAGW G C
Sbjct: 185 CIDDETEEICGGHGKCYC--------GNCYCKAGWHGDKC 216
>gi|14192943 multiple EGF-like-domains 10 [Homo sapiens]
Length = 1140
Score = 30.0 bits (66), Expect = 8.5
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 494 YLVPCLNDCGPYGQCLLLRRHSYLYASCSCKAGWRGWSCT 533
Y + C + CG + S + SC+CKAGW G C+
Sbjct: 448 YGINCSSRCGCKNDAVC----SPVDGSCTCKAGWHGVDCS 483
>gi|224451128 eyes shut homolog isoform 1 [Homo sapiens]
Length = 3144
Score = 30.0 bits (66), Expect = 8.5
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Query: 497 PC-LNDCGPYGQCLLLRRHSYLYASCSCKAGWRGWSCTD 534
PC L CG G C+ Y C+C GW+G CT+
Sbjct: 2613 PCSLMKCGNGGTCIESGTSVY----CNCTTGWKGSFCTE 2647
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 30.0 bits (66), Expect = 8.5
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 8/35 (22%)
Query: 498 CLNDCGPYGQCLLLRRHSYLYASCSCKAGWRGWSC 532
C DCG +G C+ +C C+ GW G +C
Sbjct: 739 CSVDCGTHGVCI--------GGACRCEEGWTGAAC 765
>gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens]
Length = 2699
Score = 30.0 bits (66), Expect = 8.5
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 8/39 (20%)
Query: 498 CLNDCGPYGQCLLLRRHSYLYASCSCKAGWRGWSCTDNS 536
C DCG +G C+ +C C+ GW G +C +
Sbjct: 681 CSVDCGSHGVCM--------GGTCRCEEGWTGPACNQRA 711
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.135 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,280,662
Number of Sequences: 37866
Number of extensions: 1529353
Number of successful extensions: 4132
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4087
Number of HSP's gapped (non-prelim): 60
length of query: 771
length of database: 18,247,518
effective HSP length: 110
effective length of query: 661
effective length of database: 14,082,258
effective search space: 9308372538
effective search space used: 9308372538
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.