Guide to the Human Genome
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Name: ODZ3 Sequence: fasta or formatted (2699aa) NCBI GI: 122937400
Description:

odz, odd Oz/ten-m homolog 3

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4        146           2
 C cysteine            2.8         76           2
 D aspartate           6.0        161           2
 E glutamate           5.0        136           2
 F phenylalanine       3.7         99           2
 G glycine             8.0        217           2
 H histidine           2.2         60           2
 I isoleucine          5.4        147           2
 K lysine              3.9        104           2
 L leucine             8.3        225           3
 M methionine          1.9         50           1
 N asparagine          5.1        138           3
 P proline             4.4        120           2
 Q glutamine           4.7        126           3
 R arginine            5.9        158           3
 S serine              8.6        233           3
 T threonine           7.0        189           3
 V valine              5.9        160           2
 W tryptophan          1.4         37           1
 Y tyrosine            4.3        117           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   odz, odd Oz/ten-m homolog 3 
ODZ2                  0.701   odz, odd Oz/ten-m homolog 2 
ODZ4                  0.700   odz, odd Oz/ten-m homolog 4 
ODZ1                  0.618   odz, odd Oz/ten-m homolog 1 isoform 3 
ODZ1                  0.616   odz, odd Oz/ten-m homolog 1 isoform 1 
ODZ1                  0.615   odz, odd Oz/ten-m homolog 1 isoform 2 
TNXB                  0.038   tenascin XB isoform 1 precursor 
TNC                   0.038   tenascin C precursor 
PEAR1                 0.024   platelet endothelial aggregation receptor 1 
NOTCH2                0.023   notch 2 preproprotein 
JAG1                  0.023   jagged 1 precursor 
NOTCH1                0.022   notch1 preproprotein 
VWDE                  0.021   von Willebrand factor D and EGF domains 
NOTCH3                0.021   Notch homolog 3 
MEGF10                0.021   multiple EGF-like-domains 10 
JAG2                  0.021   jagged 2 isoform b precursor 
TNR                   0.021   tenascin R 
MEGF11                0.021   multiple EGF-like-domains 11 
JAG2                  0.021   jagged 2 isoform a precursor 
ITGBL1                0.021   integrin, beta-like 1 (with EGF-like repeat domains) ...
NOTCH4                0.020   notch4 preproprotein 
DNER                  0.019   delta-notch-like EGF repeat-containing transmembran...
MEGF6                 0.018   EGF-like-domain, multiple 3 
EYS                   0.018   eyes shut homolog isoform 1 
WIF1                  0.018   WNT inhibitory factor 1 precursor 
SCARF1                0.017   scavenger receptor class F, member 1 isoform 3 precu...
SCARF1                0.017   scavenger receptor class F, member 1 isoform 1 precu...
CRB1                  0.017   crumbs homolog 1 precursor 
SCARF1                0.017   scavenger receptor class F, member 1 isoform 5 prec...
DLL1                  0.016   delta-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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