Guide to the Human Genome
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Name: EYS Sequence: fasta or formatted (3144aa) NCBI GI: 224451128
Description:

eyes shut homolog isoform 1

Referenced in:

Crystallins and Other Eye Proteins
Epidermal Growth Factor
Gene Structure

Other entries for this name:
alt prot [619aa] eyes shut homolog isoform 2
alt prot [594aa] eyes shut homolog isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9        123           2
 C cysteine            7.1        223           2
 D aspartate           4.5        142           2
 E glutamate           5.7        180           2
 F phenylalanine       5.1        161           3
 G glycine             6.9        217           2
 H histidine           2.8         89           2
 I isoleucine          6.3        197           2
 K lysine              4.4        137           2
 L leucine             8.1        256           3
 M methionine          1.3         42           1
 N asparagine          6.7        211           2
 P proline             4.8        151           2
 Q glutamine           4.0        127           2
 R arginine            3.0         95           2
 S serine              9.5        300           3
 T threonine           6.5        205           3
 V valine              5.0        156           3
 W tryptophan          1.0         32           1
 Y tyrosine            3.2        100           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eyes shut homolog isoform 1 
EYS                   0.191   eyes shut homolog isoform 3 
EYS                   0.191   eyes shut homolog isoform 2 
NOTCH1                0.090   notch1 preproprotein 
NOTCH2                0.089   notch 2 preproprotein 
NOTCH3                0.081   Notch homolog 3 
NOTCH4                0.069   notch4 preproprotein 
JAG2                  0.057   jagged 2 isoform a precursor 
JAG1                  0.056   jagged 1 precursor 
JAG2                  0.053   jagged 2 isoform b precursor 
SNED1                 0.047   6720455I24Rik homolog 
CRB1                  0.047   crumbs homolog 1 precursor 
CRB2                  0.038   crumbs homolog 2 
DNER                  0.035   delta-notch-like EGF repeat-containing transmembran...
FBN2                  0.034   fibrillin 2 precursor 
FBN1                  0.034   fibrillin 1 precursor 
FBN3                  0.033   fibrillin 3 precursor 
SVEP1                 0.032   polydom 
HSPG2                 0.031   heparan sulfate proteoglycan 2 
DLL4                  0.030   delta-like 4 protein precursor 
DLL1                  0.030   delta-like 1 
AGRN                  0.027   agrin 
MEGF10                0.025   multiple EGF-like-domains 10 
MEGF6                 0.024   EGF-like-domain, multiple 3 
MEGF11                0.023   multiple EGF-like-domains 11 
SLIT2                 0.023   slit homolog 2 
SLIT3                 0.023   slit homolog 3 
CUBN                  0.022   cubilin 
SLIT1                 0.022   slit homolog 1 
LTBP2                 0.022   latent transforming growth factor beta binding protei...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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