Guide to the Human Genome
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Name: SLC5A12 Sequence: fasta or formatted (618aa) NCBI GI: 157671931
Description:

solute carrier family 5 (sodium/glucose cotransporter), member 12

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         44           2
 C cysteine            2.9         18           1
 D aspartate           2.8         17           1
 E glutamate           2.8         17           1
 F phenylalanine       7.6         47           2
 G glycine             9.2         57           2
 H histidine           1.8         11           1
 I isoleucine          6.3         39           2
 K lysine              3.6         22           2
 L leucine            10.4         64           2
 M methionine          2.4         15           1
 N asparagine          2.6         16           2
 P proline             4.0         25           2
 Q glutamine           2.9         18           1
 R arginine            2.9         18           2
 S serine              8.3         51           2
 T threonine           7.3         45           2
 V valine              9.2         57           3
 W tryptophan          2.3         14           1
 Y tyrosine            3.7         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 5 (sodium/glucose cotransport... 
SLC5A8                0.505   solute carrier family 5 (iodide transporter), membe...
SLC5A5                0.415   solute carrier family 5 (sodium iodide symporter), me...
SLC5A6                0.370   solute carrier family 5 (sodium-dependent vitamin tr...
SLC5A11               0.094   solute carrier family 5 (sodium/glucose cotransporte...
SLC5A4                0.087   solute carrier family 5 (low affinity glucose cotran...
SLC5A1                0.079   solute carrier family 5 (sodium/glucose cotransporter...
SLC5A10               0.079   solute carrier family 5 (sodium/glucose cotransport...
SLC5A10               0.076   solute carrier family 5 (sodium/glucose cotransport...
SLC5A9                0.071   solute carrier family 5 (sodium/glucose cotransport...
SLC5A3                0.070   solute carrier family 5 (inositol transporters), me...
SLC5A2                0.066   solute carrier family 5 (sodium/glucose cotransporter...
SLC5A9                0.061   solute carrier family 5 (sodium/glucose cotransport...
SLC5A7                0.036   solute carrier family 5 (choline transporter), membe...
SLC19A2               0.006   solute carrier family 19, member 2 
ATG9B                 0.005   ATG9 autophagy related 9 homolog B 
SLC6A14               0.005   solute carrier family 6 (amino acid transporter), mem...
SLC20A1               0.005   solute carrier family 20 (phosphate transporter), me...
SLC35B4               0.004   solute carrier family 35, member B4 
OR5D16                0.004   olfactory receptor, family 5, subfamily D, member 16...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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