Guide to the Human Genome
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Name: OR5D16 Sequence: fasta or formatted (328aa) NCBI GI: 53828710
Description:

olfactory receptor, family 5, subfamily D, member 16

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         19           1
 C cysteine            3.0         10           1
 D aspartate           2.1          7           1
 E glutamate           2.4          8           1
 F phenylalanine      10.1         33           4
 G glycine             2.7          9           1
 H histidine           3.7         12           1
 I isoleucine          8.5         28           2
 K lysine              4.0         13           1
 L leucine            13.1         43           3
 M methionine          2.4          8           2
 N asparagine          4.6         15           1
 P proline             3.4         11           1
 Q glutamine           1.5          5           1
 R arginine            2.1          7           1
 S serine              8.5         28           2
 T threonine           7.6         25           2
 V valine              9.1         30           3
 W tryptophan          0.6          2           1
 Y tyrosine            4.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily D, member 16... 
OR5D18                0.763   olfactory receptor, family 5, subfamily D, member 18...
OR5D14                0.633   olfactory receptor, family 5, subfamily D, member 14...
OR5D13                0.581   olfactory receptor, family 5, subfamily D, member 13...
OR5L1                 0.538   olfactory receptor, family 5, subfamily L, member 1 ...
OR5L2                 0.527   olfactory receptor, family 5, subfamily L, member 2 ...
OR5I1                 0.472   olfactory receptor, family 5, subfamily I, member 1 [...
OR8D1                 0.459   olfactory receptor, family 8, subfamily D, member 1 ...
OR8U8                 0.449   olfactory receptor, family 8, subfamily U, member 8 ...
OR8U1                 0.448   olfactory receptor, family 8, subfamily U, member 1 ...
OR8D4                 0.448   olfactory receptor, family 8, subfamily D, member 4 ...
OR8U9                 0.445   olfactory receptor, family 8, subfamily U, member 9 ...
OR5AP2                0.443   olfactory receptor, family 5, subfamily AP, member 2...
OR5B21                0.443   olfactory receptor, family 5, subfamily B, member 21...
OR5T2                 0.440   olfactory receptor, family 5, subfamily T, member 2 ...
OR5AS1                0.440   olfactory receptor, family 5, subfamily AS, member 1...
OR5R1                 0.438   olfactory receptor, family 5, subfamily R, member 1 ...
OR5J2                 0.438   olfactory receptor, family 5, subfamily J, member 2 ...
OR5W2                 0.437   olfactory receptor, family 5, subfamily W, member 2 ...
OR5B12                0.435   olfactory receptor, family 5, subfamily B, member 12...
OR5AR1                0.434   olfactory receptor, family 5, subfamily AR, member 1...
OR8K3                 0.432   olfactory receptor, family 8, subfamily K, member 3 ...
OR5T1                 0.430   olfactory receptor, family 5, subfamily T, member 1 ...
OR8J1                 0.429   olfactory receptor, family 8, subfamily J, member 1 ...
OR8I2                 0.427   olfactory receptor, family 8, subfamily I, member 2 ...
OR8G5                 0.427   olfactory receptor, family 8, subfamily G, member 5 ...
OR5F1                 0.426   olfactory receptor, family 5, subfamily F, member 1 ...
OR8G1                 0.424   olfactory receptor, family 8, subfamily G, member 1 ...
OR5T3                 0.424   olfactory receptor, family 5, subfamily T, member 3 ...
OR8J3                 0.419   olfactory receptor, family 8, subfamily J, member 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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