Guide to the Human Genome
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Name: SLC19A2 Sequence: fasta or formatted (497aa) NCBI GI: 27734719
Description:

solute carrier family 19, member 2

Referenced in:

Solute Carrier Families
Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         45           6
 C cysteine            2.0         10           1
 D aspartate           2.2         11           1
 E glutamate           4.0         20           2
 F phenylalanine       5.6         28           2
 G glycine             5.4         27           2
 H histidine           0.6          3           2
 I isoleucine          5.8         29           2
 K lysine              2.6         13           2
 L leucine            13.1         65           2
 M methionine          2.4         12           1
 N asparagine          2.6         13           1
 P proline             4.8         24           2
 Q glutamine           3.0         15           1
 R arginine            3.4         17           2
 S serine              7.8         39           3
 T threonine           6.4         32           2
 V valine             10.5         52           2
 W tryptophan          2.8         14           2
 Y tyrosine            5.6         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 19, member 2 
SLC19A3               0.474   solute carrier family 19, member 3 
SLC19A1               0.326   solute carrier family 19 member 1 
C2orf83               0.024   hypothetical protein LOC56918 isoform 2 
C2orf83               0.024   hypothetical protein LOC56918 isoform 1 
NDUFB11               0.007   NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1...
NDUFB11               0.007   NADH dehydrogenase (ubiquinone) 1 beta subcomplex, ...
SLC5A12               0.007   solute carrier family 5 (sodium/glucose cotransport...
C9orf7                0.006   hypothetical protein LOC11094 isoform a 
ABCA2                 0.005   ATP-binding cassette, sub-family A, member 2 isoform...
ABCA2                 0.005   ATP-binding cassette, sub-family A, member 2 isoform...
SLC24A3               0.005   solute carrier family 24 (sodium/potassium/calcium e...
SLC22A16              0.005   solute carrier family 22, member 16 
CCNE2                 0.005   cyclin E2 
TMEM214               0.005   transmembrane protein 214 isoform 2 
TMEM214               0.005   transmembrane protein 214 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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