Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DOCK6 Sequence: fasta or formatted (2047aa) NCBI GI: 157426887
Description:

dedicator of cytokinesis 6

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5        174           3
 C cysteine            1.6         33           2
 D aspartate           5.2        107           2
 E glutamate           7.7        157           2
 F phenylalanine       4.5         92           3
 G glycine             5.0        102           2
 H histidine           3.3         67           2
 I isoleucine          3.3         68           2
 K lysine              4.2         86           3
 L leucine            12.4        254           3
 M methionine          1.8         36           1
 N asparagine          2.2         45           1
 P proline             6.4        132           3
 Q glutamine           3.7         76           2
 R arginine            7.5        153           4
 S serine              8.0        163           3
 T threonine           5.1        104           2
 V valine              6.4        132           2
 W tryptophan          0.6         13           1
 Y tyrosine            2.6         53           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dedicator of cytokinesis 6 
DOCK7                 0.685   dedicator of cytokinesis 7 
DOCK8                 0.501   dedicator of cytokinesis 8 
DOCK11                0.197   dedicator of cytokinesis 11 
DOCK9                 0.189   dedicator of cytokinesis 9 isoform b 
DOCK9                 0.189   dedicator of cytokinesis 9 isoform a 
DOCK10                0.128   dedicator of cytokinesis 10 
DOCK9                 0.084   dedicator of cytokinesis 9 isoform d 
DOCK9                 0.084   dedicator of cytokinesis 9 isoform c 
DOCK3                 0.012   dedicator of cytokinesis 3 
DOCK4                 0.009   dedicator of cytokinesis 4 
DOCK2                 0.008   dedicator of cytokinesis 2 
DOCK5                 0.008   dedicator of cytokinesis 5 
DOCK1                 0.007   dedicator of cytokinesis 1 
PCDH18                0.003   protocadherin 18 precursor 
LOC643446             0.003   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.003   PREDICTED: similar to ribonucleic acid binding prot...
RNPS1                 0.003   RNA-binding protein S1, serine-rich domain 
RNPS1                 0.003   RNA-binding protein S1, serine-rich domain 
ELK1                  0.003   ELK1 protein 
ELK1                  0.003   ELK1 protein 
LOC643446             0.003   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.003   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.003   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.003   PREDICTED: similar to ribonucleic acid binding prote...
ARHGEF5               0.003   rho guanine nucleotide exchange factor 5 
NCOR2                 0.002   nuclear receptor co-repressor 2 isoform 1 
MLL4                  0.002   myeloid/lymphoid or mixed-lineage leukemia 4 
ARID2                 0.002   AT rich interactive domain 2 (ARID, RFX-like) 
SYNE2                 0.002   spectrin repeat containing, nuclear envelope 2 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press