LOC643446 36744

Name: LOC643446	Sequence: fasta or formatted (305aa)		NCBI GI: 88973230
Description: PREDICTED: similar to ribonucleic acid binding protein S1 isoform 3		Referenced in: RNases and RNA Stability
Other entries for this name: alt mRNA [305aa] PREDICTED: similar to ribonucleic acid binding protein S1 alt mRNA [305aa] PREDICTED: similar to ribonucleic acid binding protein S1 alt prot [305aa] PREDICTED: similar to ribonucleic acid binding protein S1 isoform 2 alt mRNA [305aa] PREDICTED: similar to ribonucleic acid binding protein S1 alt prot [305aa] PREDICTED: similar to ribonucleic acid binding protein S1 isoform 6
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.0 9 1 C cysteine 0.3 1 1 D aspartate 4.6 14 1 E glutamate 4.3 13 1 F phenylalanine 1.0 3 1 G glycine 5.6 17 2 H histidine 2.6 8 1 I isoleucine 2.3 7 1 K lysine 9.5 29 3 L leucine 3.0 9 2 M methionine 3.0 9 1 N asparagine 2.0 6 2 P proline 8.9 27 4 Q glutamine 1.0 3 1 R arginine 16.1 49 3 S serine 23.6 72 8 T threonine 5.2 16 1 V valine 3.0 9 2 W tryptophan 0.7 2 1 Y tyrosine 0.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to ribonucleic acid binding prote... LOC643446 1.000 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 1.000 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 1.000 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.995 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.995 PREDICTED: similar to ribonucleic acid binding prot... RNPS1 0.974 RNA-binding protein S1, serine-rich domain RNPS1 0.974 RNA-binding protein S1, serine-rich domain PNN 0.109 pinin, desmosome associated protein PPRC1 0.095 peroxisome proliferator-activated receptor gamma, co... TRA2B 0.095 splicing factor, arginine/serine-rich 10 PRPF4B 0.092 serine/threonine-protein kinase PRP4K ZC3H18 0.092 zinc finger CCCH-type containing 18 SFRS2 0.090 splicing factor, arginine/serine-rich 2 SFRS4 0.088 splicing factor, arginine/serine-rich 4 ZRANB2 0.086 zinc finger protein 265 isoform 1 ZRANB2 0.086 zinc finger protein 265 isoform 2 SRRM2 0.085 splicing coactivator subunit SRm300 TNRC18 0.085 trinucleotide repeat containing 18 SRRM1 0.081 serine/arginine repetitive matrix 1 SFRS3 0.078 splicing factor, arginine/serine-rich 3 TRA2A 0.078 transformer-2 alpha MLLT3 0.076 myeloid/lymphoid or mixed-lineage leukemia (trithor... LOC100170229 0.074 hypothetical protein LOC100170229 SON 0.074 SON DNA-binding protein isoform F SON 0.074 SON DNA-binding protein isoform B SPEN 0.073 spen homolog, transcriptional regulator SETD1A 0.073 SET domain containing 1A SFRS16 0.073 splicing factor, arginine/serine-rich 16 RSRC2 0.073 arginine/serine-rich coiled-coil 2 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.