Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 157388931
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157388931 hypothetical protein LOC55026 isoform 1 [Homo
sapiens]
(349 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157388931 hypothetical protein LOC55026 isoform 1 [Homo sapiens] 723 0.0
gi|157388933 hypothetical protein LOC55026 isoform 2 [Homo sapiens] 666 0.0
gi|239757890 PREDICTED: similar to family with sequence similari... 654 0.0
gi|32699048 family with sequence similarity 70, member B [Homo s... 313 1e-85
gi|157388935 hypothetical protein LOC55026 isoform 3 [Homo sapiens] 278 7e-75
gi|239750593 PREDICTED: hypothetical protein XP_002347442 [Homo ... 72 1e-12
gi|59806357 submaxillary gland androgen regulated protein 3 homo... 49 7e-06
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 44 3e-04
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 42 0.001
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 42 0.001
gi|55750053 atrophin-1 [Homo sapiens] 40 0.004
gi|55750041 atrophin-1 [Homo sapiens] 40 0.004
gi|150417989 cyclin K isoform 1 [Homo sapiens] 39 0.009
gi|120952764 mastermind-like domain containing 1 [Homo sapiens] 38 0.012
gi|146134388 YLP motif containing 1 [Homo sapiens] 37 0.026
gi|21361937 proline rich 7 (synaptic) [Homo sapiens] 37 0.026
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.034
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens] 37 0.034
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens] 37 0.034
gi|148613878 acrosin precursor [Homo sapiens] 37 0.034
gi|51173727 Sma- and Mad-related protein 1 [Homo sapiens] 36 0.045
gi|5174509 Sma- and Mad-related protein 1 [Homo sapiens] 36 0.045
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 36 0.045
gi|94421475 paternally expressed 10 isoform RF1/2 [Homo sapiens] 36 0.045
gi|166706915 GLIS family zinc finger 1 [Homo sapiens] 36 0.045
gi|15029506 homeobox D8 [Homo sapiens] 36 0.059
gi|169163027 PREDICTED: similar to Putative acrosin-like proteas... 36 0.059
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 36 0.059
gi|11386183 WAS protein family, member 2 [Homo sapiens] 35 0.077
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap... 35 0.077
>gi|157388931 hypothetical protein LOC55026 isoform 1 [Homo sapiens]
Length = 349
Score = 723 bits (1866), Expect = 0.0
Identities = 349/349 (100%), Positives = 349/349 (100%)
Query: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG
Sbjct: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
Query: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL
Sbjct: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
Query: 121 KPLYANRCHYVPKTSQKEAEEVISSSTKNSPSTRVMRNLTQAAREVNCPHLSREFCTPRI 180
KPLYANRCHYVPKTSQKEAEEVISSSTKNSPSTRVMRNLTQAAREVNCPHLSREFCTPRI
Sbjct: 121 KPLYANRCHYVPKTSQKEAEEVISSSTKNSPSTRVMRNLTQAAREVNCPHLSREFCTPRI 180
Query: 181 RGNTCFCCDLYNCGNRVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITA 240
RGNTCFCCDLYNCGNRVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITA
Sbjct: 181 RGNTCFCCDLYNCGNRVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITA 240
Query: 241 AVLGGFKDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSG 300
AVLGGFKDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSG
Sbjct: 241 AVLGGFKDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSG 300
Query: 301 VFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 349
VFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP
Sbjct: 301 VFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 349
>gi|157388933 hypothetical protein LOC55026 isoform 2 [Homo sapiens]
Length = 325
Score = 666 bits (1718), Expect = 0.0
Identities = 325/349 (93%), Positives = 325/349 (93%), Gaps = 24/349 (6%)
Query: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG
Sbjct: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
Query: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL
Sbjct: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
Query: 121 KPLYANRCHYVPKTSQKEAEEVISSSTKNSPSTRVMRNLTQAAREVNCPHLSREFCTPRI 180
KPLYANRCHYVPKTSQKEAEEV NCPHLSREFCTPRI
Sbjct: 121 KPLYANRCHYVPKTSQKEAEEV------------------------NCPHLSREFCTPRI 156
Query: 181 RGNTCFCCDLYNCGNRVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITA 240
RGNTCFCCDLYNCGNRVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITA
Sbjct: 157 RGNTCFCCDLYNCGNRVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITA 216
Query: 241 AVLGGFKDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSG 300
AVLGGFKDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSG
Sbjct: 217 AVLGGFKDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSG 276
Query: 301 VFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 349
VFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP
Sbjct: 277 VFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 325
>gi|239757890 PREDICTED: similar to family with sequence similarity
70, member A [Homo sapiens]
Length = 377
Score = 654 bits (1686), Expect = 0.0
Identities = 320/344 (93%), Positives = 320/344 (93%), Gaps = 24/344 (6%)
Query: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG
Sbjct: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
Query: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL
Sbjct: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
Query: 121 KPLYANRCHYVPKTSQKEAEEVISSSTKNSPSTRVMRNLTQAAREVNCPHLSREFCTPRI 180
KPLYANRCHYVPKTSQKEAEEV NCPHLSREFCTPRI
Sbjct: 121 KPLYANRCHYVPKTSQKEAEEV------------------------NCPHLSREFCTPRI 156
Query: 181 RGNTCFCCDLYNCGNRVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITA 240
RGNTCFCCDLYNCGNRVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITA
Sbjct: 157 RGNTCFCCDLYNCGNRVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITA 216
Query: 241 AVLGGFKDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSG 300
AVLGGFKDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSG
Sbjct: 217 AVLGGFKDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSG 276
Query: 301 VFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKP 344
VFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKP
Sbjct: 277 VFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKP 320
>gi|32699048 family with sequence similarity 70, member B [Homo
sapiens]
Length = 326
Score = 313 bits (802), Expect = 1e-85
Identities = 173/343 (50%), Positives = 221/343 (64%), Gaps = 31/343 (9%)
Query: 13 MSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVGGYYPGVILGFGS 72
+ L D +RRK+ S++ +LL+VSVLI+TVGLAATTRT+NVTVGGYYPG+ILGFGS
Sbjct: 9 LGLLDPAEGLSRRKKTSLWFVGSLLLVSVLIVTVGLAATTRTENVTVGGYYPGIILGFGS 68
Query: 73 FLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDLKPLYANRCHYVP 132
FLGIIG NL+EN+RQMLVA+IVFISFGV+AAFCCAIVDGVFAA+HI+ +PL RC +
Sbjct: 69 FLGIIGINLVENRRQMLVAAIVFISFGVVAAFCCAIVDGVFAAQHIEPRPLTTGRCQFY- 127
Query: 133 KTSQKEAEEVISSSTKNSPSTRVMRNLTQAAREVNCPHLSREFCTPRIRGNTCFCCDLYN 192
S + ++ Q EV C L + C ++R NTC+CCDLY
Sbjct: 128 -----------------SSGVGYLYDVYQT--EVTCHSLDGK-CQLKVRSNTCYCCDLYA 167
Query: 193 CGNRVEITGGYYEYIDVSSCQDIIHLYHLLWSATILNIVGLFLGIITAAVLGGFKDMNP- 251
CG+ E + YYE+I VS CQD++HLY LLW++ +LN++GLFLGIITAAVLG FKDM P
Sbjct: 168 CGS-AEPSPAYYEFIGVSGCQDVLHLYRLLWASAVLNVLGLFLGIITAAVLGAFKDMVPL 226
Query: 252 TLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAY--DFQHSGVFPSSPPSG 309
+ A +V P Y Q+ +Y + +P +P S+Y Q FP +P S
Sbjct: 227 SQLAYGPAVP---PQTLYNPAQQILAYAGFRLTPEPVPTCSSYPLPLQPCSRFPVAPSSA 283
Query: 310 LSDEPQSASPSPSYMWS---SSAPPRYSPPYYPPFEKPPPYSP 349
L+ PSPS S APP Y+P Y+PP EKPPPY+P
Sbjct: 284 LASSEDLQPPSPSSSGSGLPGQAPPCYAPTYFPPGEKPPPYAP 326
>gi|157388935 hypothetical protein LOC55026 isoform 3 [Homo sapiens]
Length = 241
Score = 278 bits (710), Expect = 7e-75
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG
Sbjct: 1 MHQSLTQQRSSDMSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVG 60
Query: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL
Sbjct: 61 GYYPGVILGFGSFLGIIGSNLIENKRQMLVASIVFISFGVIAAFCCAIVDGVFAARHIDL 120
Query: 121 KPLYANRCHYVPKTSQKEAEE 141
KPLYANRCHYVPKTSQKEAEE
Sbjct: 121 KPLYANRCHYVPKTSQKEAEE 141
Score = 226 bits (575), Expect = 3e-59
Identities = 100/100 (100%), Positives = 100/100 (100%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG 309
NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG
Sbjct: 142 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG 201
Query: 310 LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 349
LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP
Sbjct: 202 LSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 241
>gi|239750593 PREDICTED: hypothetical protein XP_002347442 [Homo
sapiens]
Length = 135
Score = 71.6 bits (174), Expect = 1e-12
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 13 MSLPDSMGAFNRRKRNSIYVTVTLLIVSVLILTVGLAATTRTQNVTVGGYYPGVIL 68
+ L D +RRK+ S++ +LL+VSVLI+TVGLAATTRT+NVTVGGYYPG+I+
Sbjct: 9 LGLLDPAEGLSRRKKTSLWFVGSLLLVSVLIVTVGLAATTRTENVTVGGYYPGIIV 64
>gi|59806357 submaxillary gland androgen regulated protein 3 homolog
A precursor [Homo sapiens]
Length = 134
Score = 48.9 bits (115), Expect = 7e-06
Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 273 PQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASP--SPSYMWSSSAP 330
P + T + PPH PPY F P SPP G P S P P + S S P
Sbjct: 40 PPCFPFGTGFVPPPHPPPYGPGRFPP----PLSPPYGPGRIPPSPPPPYGPGRIQSHSLP 95
Query: 331 PRYSPPYYPPFEKPPPYSP 349
P Y P Y P +P PY P
Sbjct: 96 PPYGPGYPQPPSQPRPYPP 114
Score = 29.3 bits (64), Expect = 5.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 314 PQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 349
P + P P + + + P PP Y P PPP SP
Sbjct: 34 PLAPPPPPCFPFGTGFVPPPHPPPYGPGRFPPPLSP 69
Score = 28.5 bits (62), Expect = 9.4
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 306 PPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 349
PP L+ P P + PP Y P +PP PPY P
Sbjct: 31 PPGPLAPPPPPCFPFGTGFVPPPHPPPYGPGRFPP-PLSPPYGP 73
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 43.5 bits (101), Expect = 3e-04
Identities = 37/103 (35%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + N PT Y+ P SY+ S P P YS +S PS P+
Sbjct: 1623 SPTSPSYSPTSPNYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P S S SP+ S P YSP P Y P P YSP
Sbjct: 1682 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSYSP 1722
Score = 41.6 bits (96), Expect = 0.001
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + PT Y+ P SY+ S P P YS +S PS P+
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P S S SP+ S P YSP P Y P P YSP
Sbjct: 1696 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSYSP 1736
Score = 41.6 bits (96), Expect = 0.001
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + PT Y+ P SY+ S P P YS +S PS P+
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P S S SP+ S P YSP P Y P P YSP
Sbjct: 1703 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSYSP 1743
Score = 41.2 bits (95), Expect = 0.001
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + PT Y+ P SY+ S P P YS +S PS P+
Sbjct: 1651 SPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P S S SP+ S P YSP P Y P P YSP
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPNYSP 1750
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 244 GGFKDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFP 303
GG+ +P+ + S T P+ S P +Y+ P P YS +S P
Sbjct: 1606 GGYTPQSPSYSPTSPSYSPTSPSYS----PTSPNYS------PTSPSYSPTSPSYSPTSP 1655
Query: 304 SSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P+ S P S S SP+ S P YSP P Y P P YSP
Sbjct: 1656 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSYSP 1701
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + N PT Y+ P SY+ S P P YS +++ P+ PS
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYS-PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P S S SP+ + P YSP P Y P P YSP
Sbjct: 1822 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTP--TSPKYSP 1862
Score = 40.4 bits (93), Expect = 0.002
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + PT Y+ P SY+ S P P YS +S PS P+
Sbjct: 1672 SPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P S S SP+ S P Y+P P Y P P YSP
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP--TSPSYSP 1771
Score = 40.4 bits (93), Expect = 0.002
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + N PT Y P SY+ S P P Y+ +S PS P+
Sbjct: 1735 SPTSPSYSPTSPNYSPTSPNYT-PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPT 1793
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P S S SPS + P Y+P P Y P P YSP
Sbjct: 1794 SPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSP 1834
Score = 40.4 bits (93), Expect = 0.002
Identities = 37/110 (33%), Positives = 47/110 (42%), Gaps = 13/110 (11%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYN--------TYYHSPPHLPPYSAYDFQHSGV 301
+PT P + + N PT Y+ P SY+ T + P P YS +S
Sbjct: 1742 SPTSPNYSPTSPNYTPTSPSYS-PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT 1800
Query: 302 FPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
PS PS PQS + +PS S + P YSP P Y P P YSP
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTP--TSPSYSP 1848
Score = 39.3 bits (90), Expect = 0.005
Identities = 38/106 (35%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + PT Y+ P SY+ S P P YS +S PS P+
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 309 GLSDEPQSAS---PSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P S S SPSY S P YSP P Y P P YSP
Sbjct: 1724 SPSYSPTSPSYSPTSPSY---SPTSPNYSPTSPNYTP--TSPSYSP 1764
Score = 39.3 bits (90), Expect = 0.005
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + PT Y+ P SY+ S P P YS +S P+ P+
Sbjct: 1700 SPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPT 1758
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P S S SP+ + P YSP P Y P P YSP
Sbjct: 1759 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP--TSPSYSP 1799
Score = 39.3 bits (90), Expect = 0.005
Identities = 36/106 (33%), Positives = 42/106 (39%), Gaps = 9/106 (8%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSP--- 306
+PT P + N PT Y+ P SY+ SP + P Y Q PSSP
Sbjct: 1770 SPTSPNYTPTSPNYSPTSPSYS-PTSPSYSPT--SPSYSPSSPRYTPQSPTYTPSSPSYS 1826
Query: 307 ---PSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 349
PS P+ SPSY SS SP Y P K P SP
Sbjct: 1827 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Score = 38.9 bits (89), Expect = 0.007
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + P+ Y PQ +Y S P P YS +++ PS PS
Sbjct: 1791 SPTSPSYSPTSPSYSPSSPRYT-PQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPS 1849
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
P S SP+ S P+YSP P Y P P YSP
Sbjct: 1850 SPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP--TTPKYSP 1890
Score = 38.5 bits (88), Expect = 0.009
Identities = 37/105 (35%), Positives = 46/105 (43%), Gaps = 17/105 (16%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG 309
+PT P+ + + + PT Y+ P SY+ P P YS +S PS P+
Sbjct: 1616 SPTSPSYSPTSPSYSPTSPNYS-PTSPSYS------PTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 310 LSDEPQSAS---PSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P S S SPSY S P YSP P Y P P YSP
Sbjct: 1669 PSYSPTSPSYSPTSPSY---SPTSPSYSPTSPSYSP--TSPSYSP 1708
Score = 38.5 bits (88), Expect = 0.009
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYN-TYYHSPPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + PT Y+ P +Y+ T + P P YS +S P+ P+
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYS-PTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
+ P S S SP+ S P YSP P Y P + P Y+P
Sbjct: 1780 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP--QSPTYTP 1820
Score = 37.4 bits (85), Expect = 0.020
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + PT Y+ P SY+ S P P YS +S PS P+
Sbjct: 1679 SPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1737
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P S + SP+ + P YSP P Y P P Y+P
Sbjct: 1738 SPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP--TSPNYTP 1778
Score = 37.4 bits (85), Expect = 0.020
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + PT Y+ P SY+ S P P YS ++ PS P+
Sbjct: 1707 SPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPT 1765
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
S P S + +P+ S P YSP P Y P P YSP
Sbjct: 1766 SPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP--TSPSYSP 1806
Score = 37.0 bits (84), Expect = 0.026
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYN-TYYHSPPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + PT Y+ P SY+ T + P P Y+ +S PS P+
Sbjct: 1714 SPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1772
Query: 309 GLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
+ P S + SP+ S P YSP P Y P P Y+P
Sbjct: 1773 SPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP--SSPRYTP 1813
Score = 36.6 bits (83), Expect = 0.034
Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 16/108 (14%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSP--- 306
+PT P+ + + + PT Y+ P Y SP + P +Y P+SP
Sbjct: 1784 SPTSPSYSPTSPSYSPTSPSYS-PSSPRYTP--QSPTYTPSSPSYSPSSPSYSPTSPKYT 1840
Query: 307 ---PSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
PS P+ SP Y S P+YSP P Y P P YSP
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKY---SPTSPKYSPTSPKYSP--TSPTYSP 1883
Score = 36.2 bits (82), Expect = 0.045
Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + PT Y+ P SY+ S P P YS +S PS P+
Sbjct: 1686 SPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 309 GLSDEPQSAS---PSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
+ P S + SPSY S P YSP P Y P P YSP
Sbjct: 1745 SPNYSPTSPNYTPTSPSY---SPTSPSYSPTSPNYTP--TSPNYSP 1785
Score = 35.8 bits (81), Expect = 0.059
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 284 SPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPF 341
SP + P AY+ + G + PS P + SPSY S P YSP P Y P
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSY---SPTSPNYSPTSPSYSP- 1645
Query: 342 EKPPPYSP 349
P YSP
Sbjct: 1646 -TSPSYSP 1652
Score = 35.4 bits (80), Expect = 0.077
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHS-PPHLPPYSAYDFQHSGVFPSSPPS 308
+PT P+ + + + PT Y+ P SY+ S P P YS +S P+ P+
Sbjct: 1693 SPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751
Query: 309 GLSDEPQSAS---PSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
+ P S S SPSY S P Y+P P Y P P YSP
Sbjct: 1752 SPNYTPTSPSYSPTSPSY---SPTSPNYTPTSPNYSP--TSPSYSP 1792
Score = 33.9 bits (76), Expect = 0.22
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 251 PTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSGL 310
P+ P+ + S + PT Y P SY+ P P Y+ ++S P P+
Sbjct: 1820 PSSPSYSPSSPSYSPTSPKYT-PTSPSYS------PSSPEYTPTSPKYSPTSPKYSPTSP 1872
Query: 311 SDEPQSASPSPSYMWSSSAPPRYSPP---YYPPFEKPPPYSP 349
P S + SP+ S P YSP Y P K P SP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSP 1914
Score = 33.9 bits (76), Expect = 0.22
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSG 309
+P+ P+ + + PT Y+ T P P YS ++S P+ P+
Sbjct: 1826 SPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTT 1885
Query: 310 LSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
P S + SP+ + P+YSP P Y P P YSP
Sbjct: 1886 PKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP--TSPKYSP 1925
Score = 33.1 bits (74), Expect = 0.38
Identities = 31/101 (30%), Positives = 40/101 (39%), Gaps = 11/101 (10%)
Query: 251 PTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSGL 310
PT P+ + S PT Y+ P Y+ P P YS +S P P+
Sbjct: 1841 PTSPSYSPSSPEYTPTSPKYS-PTSPKYS------PTSPKYSPTSPTYSPTTPKYSPTSP 1893
Query: 311 SDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
+ P S +P+ S P YSP P Y P P YSP
Sbjct: 1894 TYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSP--TSPTYSP 1932
Score = 32.7 bits (73), Expect = 0.50
Identities = 32/95 (33%), Positives = 37/95 (38%), Gaps = 15/95 (15%)
Query: 265 PTVSYYAHPQVASYNTYYHSPPHLPPYS--AYDFQHSGVFPSSP------PSGLSDEPQS 316
P+ Y P A +Y + P P S Y Q P+SP PS P
Sbjct: 1577 PSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY 1636
Query: 317 ASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
+ SPSY S P YSP P Y P P YSP
Sbjct: 1637 SPTSPSY---SPTSPSYSPTSPSYSP--TSPSYSP 1666
Score = 32.3 bits (72), Expect = 0.65
Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 16/108 (14%)
Query: 250 NPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSP--- 306
+PT P+ + S P Y P SY+ SP + P Y PSSP
Sbjct: 1798 SPTSPSYSPSSPRYTPQSPTYT-PSSPSYSP--SSPSYSPTSPKYTPTSPSYSPSSPEYT 1854
Query: 307 ---PSGLSDEPQSASPSPSYMWSSSAPPRYSP--PYYPPFEKPPPYSP 349
P P+ + SP Y S P YSP P Y P P YSP
Sbjct: 1855 PTSPKYSPTSPKYSPTSPKY---SPTSPTYSPTTPKYSP--TSPTYSP 1897
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 41.6 bits (96), Expect = 0.001
Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 285 PPHLPPYSAYDFQHSGVF------PSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYY 338
PP PP YD+ F PSS S S S+S S S SSS + PP
Sbjct: 68 PPPQPPPPQYDYPPQSTFKPKAEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPDPPLP 127
Query: 339 PPFEKPPP 346
P F PPP
Sbjct: 128 PAFGAPPP 135
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 41.6 bits (96), Expect = 0.001
Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 285 PPHLPPYSAYDFQHSGVF------PSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYY 338
PP PP YD+ F PSS S S S+S S S SSS + PP
Sbjct: 68 PPPQPPPPQYDYPPQSTFKPKAEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPDPPLP 127
Query: 339 PPFEKPPP 346
P F PPP
Sbjct: 128 PAFGAPPP 135
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 39.7 bits (91), Expect = 0.004
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 262 NTHPTVSYYAHPQVASYNTYYHSPPHLPP-YSAYDFQHSGVFPSSPPSGLSDEPQSASPS 320
++H Y P + S Y P HLPP +S + +G P+ PP S S++
Sbjct: 523 SSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAG--PNGPPVSSSSNSSSSTSQ 580
Query: 321 PSYMWSSSAP---PRYSPPYYPP 340
SY S +P P+ +P +PP
Sbjct: 581 GSYPCSHPSPSQGPQGAPYPFPP 603
Score = 32.3 bits (72), Expect = 0.65
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 284 SPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSAS----------PSPSYMWSSSAPPRY 333
+PP PYS+ + SS S S P AS P P+ + S+ PP+Y
Sbjct: 368 APPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKY 427
Query: 334 SPPYYPP----FEKPPPYSP 349
+ P P + PPP P
Sbjct: 428 TQPSLPSQAVWSQGPPPPPP 447
Score = 29.3 bits (64), Expect = 5.5
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Query: 254 PALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYS---AYDFQHSGVFPSS 305
P + SV N P Y P + S + PP PPY A H G FP S
Sbjct: 414 PPTSLSVSNQPPK---YTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPS 465
Score = 28.9 bits (63), Expect = 7.2
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 13/59 (22%)
Query: 304 SSPPSGLSDEPQSASPS-------------PSYMWSSSAPPRYSPPYYPPFEKPPPYSP 349
SS P + + +S SPS S + A P + PP +PP +PP +P
Sbjct: 118 SSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTP 176
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 39.7 bits (91), Expect = 0.004
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 262 NTHPTVSYYAHPQVASYNTYYHSPPHLPP-YSAYDFQHSGVFPSSPPSGLSDEPQSASPS 320
++H Y P + S Y P HLPP +S + +G P+ PP S S++
Sbjct: 523 SSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAG--PNGPPVSSSSNSSSSTSQ 580
Query: 321 PSYMWSSSAP---PRYSPPYYPP 340
SY S +P P+ +P +PP
Sbjct: 581 GSYPCSHPSPSQGPQGAPYPFPP 603
Score = 32.3 bits (72), Expect = 0.65
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
Query: 284 SPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSAS----------PSPSYMWSSSAPPRY 333
+PP PYS+ + SS S S P AS P P+ + S+ PP+Y
Sbjct: 368 APPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKY 427
Query: 334 SPPYYPP----FEKPPPYSP 349
+ P P + PPP P
Sbjct: 428 TQPSLPSQAVWSQGPPPPPP 447
Score = 29.3 bits (64), Expect = 5.5
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Query: 254 PALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYS---AYDFQHSGVFPSS 305
P + SV N P Y P + S + PP PPY A H G FP S
Sbjct: 414 PPTSLSVSNQPPK---YTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPS 465
Score = 28.9 bits (63), Expect = 7.2
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 13/59 (22%)
Query: 304 SSPPSGLSDEPQSASPS-------------PSYMWSSSAPPRYSPPYYPPFEKPPPYSP 349
SS P + + +S SPS S + A P + PP +PP +PP +P
Sbjct: 118 SSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTP 176
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 38.5 bits (88), Expect = 0.009
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 273 PQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPR 332
P + Y P HLP H V+P +PP P ++ P P+ + P
Sbjct: 456 PSYGALPPAYGPPAHLP-------YHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPP 508
Query: 333 YSPPYYPPFEKPPPYSP 349
P Y P F PPP P
Sbjct: 509 PPPTYNPNFPPPPPRLP 525
Score = 29.6 bits (65), Expect = 4.2
Identities = 26/85 (30%), Positives = 29/85 (34%), Gaps = 25/85 (29%)
Query: 265 PTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYM 324
PT Y P + N + PP LPP A P PP GL P S
Sbjct: 502 PTPGYPPPPPTYNPN-FPPPPPRLPPTHAV--------PPHPPPGLGLPPAS-------- 544
Query: 325 WSSSAPPRYSPPYYPPFEKPPPYSP 349
Y PP PP +PP P
Sbjct: 545 --------YPPPAVPPGGQPPVPPP 561
>gi|120952764 mastermind-like domain containing 1 [Homo sapiens]
Length = 774
Score = 38.1 bits (87), Expect = 0.012
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 285 PPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYP-PFEK 343
P LPP + H+ + S + P+PS WS PP SPPY P P
Sbjct: 290 PVALPPLPVPQWHHAHQLKALAASKQGSATKQQGPTPS--WSGLPPPGLSPPYRPVPSPH 347
Query: 344 PPP 346
PPP
Sbjct: 348 PPP 350
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 37.0 bits (84), Expect = 0.026
Identities = 34/114 (29%), Positives = 40/114 (35%), Gaps = 21/114 (18%)
Query: 244 GGFKDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYH--SPPHLPPYSAYDFQHSGV 301
GG+ D P P + P +SY Q ++ PP L P
Sbjct: 95 GGYGDWQPPPPPMP---PPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMEL-------- 143
Query: 302 FPSSPPSGLSDEPQS-ASPSPSYMWSSSAPPRYSP-----PYYPPFEKPPPYSP 349
SPP P S PS SYM PP Y P PY PP + P SP
Sbjct: 144 --ESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSP 195
Score = 31.6 bits (70), Expect = 1.1
Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 285 PPHLPPYSAYDFQHSGVFPSSPPSGLSDE-PQSASPSPSYMWSSSAPPRYSPPYYPPFEK 343
PP +PP +G P PP LS P P PS SS+APP P PP
Sbjct: 575 PPGMPP----SLSSAGPPPVLPPPSLSSAGPPPVLPPPSL--SSTAPPPVMP--LPPLSS 626
Query: 344 --PPPYSP 349
PPP P
Sbjct: 627 ATPPPGIP 634
Score = 31.2 bits (69), Expect = 1.4
Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Query: 287 HLPPYSAY---DFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPY-YPPFE 342
HLPP + G++P PP P P S + S+ P R S P PP
Sbjct: 1488 HLPPQESRLQNTSSRPGMYP--PPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVP 1545
Query: 343 KPPPYSP 349
PPP P
Sbjct: 1546 IPPPPPP 1552
Score = 30.8 bits (68), Expect = 1.9
Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 16/85 (18%)
Query: 265 PTVSYYAHPQVA-SYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSY 323
P+ SY PQ SY S P+LPP Q SPPS +P+PSY
Sbjct: 160 PSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQ-------SPPS-----QSYLAPTPSY 207
Query: 324 MWSSSAPPRY---SPPYYPPFEKPP 345
SSS+ Y S Y P + P
Sbjct: 208 SSSSSSSQSYLSHSQSYLPSSQASP 232
Score = 30.8 bits (68), Expect = 1.9
Identities = 35/120 (29%), Positives = 46/120 (38%), Gaps = 32/120 (26%)
Query: 249 MNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPP--------YSAYDFQH-- 298
+ P+ P SV T P V P PP LPP SA + +
Sbjct: 1526 VRPSAPPARSSVPVTRPPVPIPPPPP----------PPPLPPPPPVIKPQTSAVEQERWD 1575
Query: 299 ----SGVFPSSPPSGLSDEPQS---ASPS-----PSYMWSSSAPPRYSPPYYPPFEKPPP 346
G++ ++ GL+ E +S A PS P + SS PP P PP KPPP
Sbjct: 1576 EDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPPVHSSIPPPGPVPMGMPPMSKPPP 1635
Score = 28.9 bits (63), Expect = 7.2
Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 285 PPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKP 344
PP +PP S P PPS S P P PS + S+ PP PP P
Sbjct: 562 PPVMPP----SLPTSVPPPGMPPSLSSAGPPPVLPPPS-LSSAGPPPVLPPPSLSS-TAP 615
Query: 345 PPYSP 349
PP P
Sbjct: 616 PPVMP 620
>gi|21361937 proline rich 7 (synaptic) [Homo sapiens]
Length = 274
Score = 37.0 bits (84), Expect = 0.026
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 270 YAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSA 329
++HP V + +H P P A+ H P PP+ LS P+ S S
Sbjct: 91 HSHPHVHVHPLLHHGPAQ-PHAHAHPHPHHHALPHPPPTHLSVPPRPWSYPRQAESDMSK 149
Query: 330 PPRYSPPYYPPFEKPPPYS 348
PP Y E PPPYS
Sbjct: 150 PPCYEEAVLMA-EPPPPYS 167
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 36.6 bits (83), Expect = 0.034
Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Query: 284 SPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSY---MWSSSAPPRYSPP--YY 338
SPP PP S S PS P L+ P PSP M S+ PP +PP
Sbjct: 678 SPPASPPVSP-----SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 732
Query: 339 PPFEKP--PPYSP 349
PP + P PP SP
Sbjct: 733 PPLQVPPSPPASP 745
Score = 32.7 bits (73), Expect = 0.50
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 285 PPHLPPYSAYD-FQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAP--PRYSPPYYPPF 341
PP PP A Q P+SPP P +P+ + AP P SPP PF
Sbjct: 618 PPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF 677
Query: 342 EKP--PPYSP 349
P PP SP
Sbjct: 678 SPPASPPVSP 687
Score = 31.2 bits (69), Expect = 1.4
Identities = 29/99 (29%), Positives = 35/99 (35%), Gaps = 7/99 (7%)
Query: 247 KDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSP 306
KD P L L+ S T A P N P LPP + P +P
Sbjct: 290 KDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPL----ATPLPLAP 345
Query: 307 PSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPP 345
PS + PSP S APP + PP + PP
Sbjct: 346 PSPSAPPSLQTLPSPPATPPSQAPPSMTT---PPMQAPP 381
Score = 29.6 bits (65), Expect = 4.2
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 13/60 (21%)
Query: 303 PSSPPSGLSDEPQSASP-SPSYMWSSSAPPRY---------SPPYYPPFE---KPPPYSP 349
P SPP P ++ P SPS S APP SPP PP PPP +P
Sbjct: 668 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 727
Score = 29.3 bits (64), Expect = 5.5
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 303 PSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPY-YPPFEKP--PPYSP 349
P +PP+ L+ P PSP ++ PP+ P PP + P PP SP
Sbjct: 592 PQAPPA-LASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASP 640
Score = 29.3 bits (64), Expect = 5.5
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 10/67 (14%)
Query: 284 SPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPS----YMWSSSAPPRYSPPY-Y 338
SPP PP S S P P L+ P PSP S++ PPR P
Sbjct: 709 SPPASPPMSP-----SATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAA 763
Query: 339 PPFEKPP 345
PP + PP
Sbjct: 764 PPLQVPP 770
Score = 29.3 bits (64), Expect = 5.5
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 303 PSSPPSGLSDEPQSASPSPSYMWSSSAP--PRYSPPYYPPFEKPPPYSP 349
P +PP+ L+ P A PSP + AP P S P P PPP +P
Sbjct: 786 PQAPPA-LATPPLQALPSPPASFPGQAPFSPSASLP-MSPLATPPPQAP 832
Score = 28.5 bits (62), Expect = 9.4
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 25/70 (35%)
Query: 284 SPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYY--PPF 341
SPP PP A P SPP ASP S S+ PP +PP PP
Sbjct: 666 SPPPSPPVQA---------PFSPP---------ASPPVS---PSATPPSQAPPSLAAPPL 704
Query: 342 EKP--PPYSP 349
+ P PP SP
Sbjct: 705 QVPPSPPASP 714
>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
Length = 378
Score = 36.6 bits (83), Expect = 0.034
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 284 SPPHLPPYSAYDFQHS-GVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFE 342
+PP PP+++Y G FP PP G PQ P + + PP + PP
Sbjct: 255 APPPPPPFTSYIVSTPPGGFP--PPQGF---PQGYGAPPQFSFGYGPPPPPPDQFAPPGV 309
Query: 343 KPPPYSP 349
PPP +P
Sbjct: 310 PPPPATP 316
>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
Length = 407
Score = 36.6 bits (83), Expect = 0.034
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 284 SPPHLPPYSAYDFQHS-GVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFE 342
+PP PP+++Y G FP PP G PQ P + + PP + PP
Sbjct: 255 APPPPPPFTSYIVSTPPGGFP--PPQGF---PQGYGAPPQFSFGYGPPPPPPDQFAPPGV 309
Query: 343 KPPPYSP 349
PPP +P
Sbjct: 310 PPPPATP 316
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 36.6 bits (83), Expect = 0.034
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 285 PPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKP 344
PP PP+S H + PP L P +A P P PP SP PP P
Sbjct: 310 PPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPASP--LPPPPPP 367
Query: 345 PPYSP 349
PP +P
Sbjct: 368 PPPTP 372
>gi|51173727 Sma- and Mad-related protein 1 [Homo sapiens]
Length = 465
Score = 36.2 bits (82), Expect = 0.045
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 272 HPQVASYNTYYHSPPHLPPYSAY--DFQ--HSGVFPSSPPSGLSDEPQSASPSPSYMWSS 327
H +A + + PH+P + + FQ +S FP SP S + P S+S + + +S
Sbjct: 150 HSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHSPTS 209
Query: 328 SAPPRYSPPYYPPFEKPPP 346
S P P+ P + PPP
Sbjct: 210 SDP---GSPFQMPADTPPP 225
>gi|5174509 Sma- and Mad-related protein 1 [Homo sapiens]
Length = 465
Score = 36.2 bits (82), Expect = 0.045
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 272 HPQVASYNTYYHSPPHLPPYSAY--DFQ--HSGVFPSSPPSGLSDEPQSASPSPSYMWSS 327
H +A + + PH+P + + FQ +S FP SP S + P S+S + + +S
Sbjct: 150 HSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHSPTS 209
Query: 328 SAPPRYSPPYYPPFEKPPP 346
S P P+ P + PPP
Sbjct: 210 SDP---GSPFQMPADTPPP 225
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 36.2 bits (82), Expect = 0.045
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 286 PHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPP 345
P LP ++ + Q P PP +PQ P PP++ PP+ PP + PP
Sbjct: 568 PFLPTHTQPNLQG----PLHPPLPPPHQPQPQQPQ------QQPPPQHQPPHQPPHQPPP 617
Query: 346 PYSP 349
+ P
Sbjct: 618 QHQP 621
>gi|94421475 paternally expressed 10 isoform RF1/2 [Homo sapiens]
Length = 708
Score = 36.2 bits (82), Expect = 0.045
Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 257 NCSVENTHPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSP------PSGL 310
N +++N +P +S A TY P +P Y Y +P+ P P G
Sbjct: 602 NFTIQNQYPRLSIPNLEDQAHLATYTEFVPQIPGYQTYPTY--AAYPTYPVGFAWYPVGR 659
Query: 311 SDEPQSASPSPSYMWS-----SSAPPRYSPPYYPPFEKPPPYSP 349
+ +S W+ P+Y PP PP PPP P
Sbjct: 660 DGQGRSLYVPVMITWNPHWYRQPPVPQYPPPQPPPPPPPPPPPP 703
>gi|166706915 GLIS family zinc finger 1 [Homo sapiens]
Length = 620
Score = 36.2 bits (82), Expect = 0.045
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 272 HPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPS--SPPSGLSDEPQSASPSPSYMWSSSA 329
HP A+ ++++H P S D G+ SP GL P S
Sbjct: 429 HPLDATTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGLGPPPLPPSSQSHSPGGQPF 488
Query: 330 PPRYSPPYYPPFEKPPP 346
P S P YPPF+ PPP
Sbjct: 489 PTLPSKPSYPPFQSPPP 505
>gi|15029506 homeobox D8 [Homo sapiens]
Length = 290
Score = 35.8 bits (81), Expect = 0.059
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 21/72 (29%)
Query: 286 PHLPPYSAYDFQHSGVFPSSPPSGLSD-----------EPQSASPSPSYMWSSSAPPRYS 334
PH PP + H+ PS PPSG P SP+ +Y +APP
Sbjct: 62 PHAPPQA-----HAHPHPSPPPSGTGCGGREGRGQEYFHPGGGSPAAAYQ---AAPP--P 111
Query: 335 PPYYPPFEKPPP 346
PP+ PP PPP
Sbjct: 112 PPHPPPPPPPPP 123
>gi|169163027 PREDICTED: similar to Putative acrosin-like protease
[Homo sapiens]
Length = 355
Score = 35.8 bits (81), Expect = 0.059
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 285 PPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKP 344
PP PP+S H + PP L P +A P P PP SP PP P
Sbjct: 244 PPIRPPFSHPLSAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPPSP--LPPPPPP 301
Query: 345 PPYSP 349
PP +P
Sbjct: 302 PPPTP 306
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 35.8 bits (81), Expect = 0.059
Identities = 15/45 (33%), Positives = 19/45 (42%)
Query: 303 PSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPY 347
P P G S P P + PP+ PP PP +PPP+
Sbjct: 46 PMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPH 90
Score = 33.5 bits (75), Expect = 0.29
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 284 SPPHLPPYS-AYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFE 342
+PP PP S A G P+ PP+ S P + P+P + PP+ P PP
Sbjct: 131 APPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAA 190
Query: 343 KPPP 346
P P
Sbjct: 191 VPGP 194
Score = 32.7 bits (73), Expect = 0.50
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 285 PPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYS--PPYYPPFE 342
PPH PP + H P PP S + P P+ SAPP S PP PP
Sbjct: 83 PPHQPP--PHPQPHQQQQPPPPPQDSSKPVVAQGPGPA-PGVGSAPPASSSAPPATPPTS 139
Query: 343 KPPPYS 348
PP S
Sbjct: 140 GAPPGS 145
Score = 28.5 bits (62), Expect = 9.4
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 305 SPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEKPPPYSP 349
SPP G+ P S PP PP + ++PPP P
Sbjct: 33 SPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQP 77
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 35.4 bits (80), Expect = 0.077
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 284 SPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPPFEK 343
SPP PP+ + P PP +D P P S + PP PP PP
Sbjct: 351 SPPSFPPHPDF-----AAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP--PPGPP 403
Query: 344 PPPYS 348
PPP++
Sbjct: 404 PPPFT 408
Score = 34.7 bits (78), Expect = 0.13
Identities = 33/111 (29%), Positives = 40/111 (36%), Gaps = 10/111 (9%)
Query: 246 FKDMNPTLPALNCSVENTHPTVSYYAHPQVASYNTYYHSPPH----LPPYSAYDFQHSGV 301
F + N P S + S A P+ +S + H PP PP F
Sbjct: 262 FSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPA 321
Query: 302 FPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYSPPYYPP---FEKPPPYSP 349
P PP + P P P S PP SPP +PP F PPP P
Sbjct: 322 PPPPPPPMIGIPPP---PPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPP 369
>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sapiens]
Length = 2365
Score = 35.4 bits (80), Expect = 0.077
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 276 ASYNTYYHSP-PHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSYMWSSSAPPRYS 334
A+Y SP P PP + SSPP L +P P P S PP +
Sbjct: 998 AAYGAPLTSPEPSQPPCAVCIGHRDAPRASSPPRYLQHDPFPFFPEPRA--PESEPPHHE 1055
Query: 335 PPYYPP 340
PPY PP
Sbjct: 1056 PPYIPP 1061
Score = 30.0 bits (66), Expect = 3.2
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 264 HPTVSYYAHPQVASYNTYYHSPPHLPPYSAYDFQHSGVFPSSPPSGLSDEPQSASPSPSY 323
H ++ P+ +H PP++PP SSPP +P P
Sbjct: 1035 HDPFPFFPEPRAPESEPPHHEPPYIPPAVCIG-HRDAPRASSPPRHTQFDPFPFLPD--- 1090
Query: 324 MWSSSAPPRYSPPYYPPFEKPPP 346
+S A + P + P + P P
Sbjct: 1091 --TSDAEHQCQSPQHEPLQLPAP 1111
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,108,476
Number of Sequences: 37866
Number of extensions: 775569
Number of successful extensions: 5734
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 229
Number of HSP's that attempted gapping in prelim test: 4520
Number of HSP's gapped (non-prelim): 1117
length of query: 349
length of database: 18,247,518
effective HSP length: 103
effective length of query: 246
effective length of database: 14,347,320
effective search space: 3529440720
effective search space used: 3529440720
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.