Guide to the Human Genome
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Name: FAM70B Sequence: fasta or formatted (326aa) NCBI GI: 32699048
Description:

family with sequence similarity 70, member B

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         29           2
 C cysteine            4.0         13           2
 D aspartate           2.5          8           1
 E glutamate           3.1         10           1
 F phenylalanine       4.3         14           1
 G glycine             9.2         30           2
 H histidine           0.9          3           1
 I isoleucine          4.3         14           2
 K lysine              1.8          6           2
 L leucine            11.7         38           3
 M methionine          0.9          3           1
 N asparagine          1.8          6           1
 P proline            11.0         36           3
 Q glutamine           4.3         14           2
 R arginine            3.4         11           2
 S serine              8.3         27           3
 T threonine           4.9         16           2
 V valine              8.6         28           2
 W tryptophan          0.6          2           1
 Y tyrosine            5.5         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 70, member B 
FAM70A                0.453   hypothetical protein LOC55026 isoform 2 
FAM70A                0.445   hypothetical protein LOC55026 isoform 1 
LOC100291726          0.436   PREDICTED: similar to family with sequence similari...
FAM70A                0.227   hypothetical protein LOC55026 isoform 3 
LOC100291462          0.159   PREDICTED: hypothetical protein XP_002347442 
WASL                  0.034   Wiskott-Aldrich syndrome gene-like protein 
MLL2                  0.028   myeloid/lymphoid or mixed-lineage leukemia 2 
MAPK7                 0.026   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.026   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.026   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.026   mitogen-activated protein kinase 7 isoform 2 
SMAD1                 0.025   Sma- and Mad-related protein 1 
SMAD1                 0.025   Sma- and Mad-related protein 1 
FLJ22184              0.023   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.023   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.023   PREDICTED: hypothetical protein LOC80164 
DIAPH1                0.022   diaphanous 1 isoform 2 
DIAPH1                0.022   diaphanous 1 isoform 1 
SMAD5                 0.022   SMAD, mothers against DPP homolog 5 
SMAD5                 0.022   SMAD, mothers against DPP homolog 5 
SMAD5                 0.022   SMAD, mothers against DPP homolog 5 
PTPN23                0.022   protein tyrosine phosphatase, non-receptor type 23 [...
WIPF3                 0.022   WAS/WASL interacting protein family, member 3 [Homo...
WBP2                  0.022   WW domain binding protein 2 
FMN1                  0.022   formin 1 
MNT                   0.022   MAX binding protein 
OSBPL9                0.020   oxysterol binding protein-like 9 isoform f 
OSBPL9                0.020   oxysterol binding protein-like 9 isoform d 
OSBPL9                0.020   oxysterol binding protein-like 9 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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