BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|15718702 caspase 7 isoform beta [Homo sapiens] (253 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|15718702 caspase 7 isoform beta [Homo sapiens] 520 e-148 gi|15718698 caspase 7 isoform delta [Homo sapiens] 306 1e-83 gi|15718700 caspase 7 isoform alpha [Homo sapiens] 306 1e-83 gi|4502581 caspase 7 isoform alpha precursor [Homo sapiens] 306 1e-83 gi|14790115 caspase 3 preproprotein [Homo sapiens] 92 6e-19 gi|14790119 caspase 3 preproprotein [Homo sapiens] 92 6e-19 gi|122056476 caspase 8 isoform G precursor [Homo sapiens] 70 2e-12 gi|122056474 caspase 8 isoform C precursor [Homo sapiens] 70 2e-12 gi|15718708 caspase 8 isoform C precursor [Homo sapiens] 70 2e-12 gi|15718706 caspase 8 isoform B precursor [Homo sapiens] 70 2e-12 gi|15718704 caspase 8 isoform A precursor [Homo sapiens] 70 2e-12 gi|47078272 caspase 10 isoform d preproprotein [Homo sapiens] 65 7e-11 gi|47078269 caspase 10 isoform b preproprotein [Homo sapiens] 65 7e-11 gi|47078267 caspase 10 isoform a preproprotein [Homo sapiens] 63 2e-10 gi|14790124 caspase 9 isoform alpha preproprotein [Homo sapiens] 63 2e-10 gi|14916483 caspase 6 isoform alpha preproprotein [Homo sapiens] 62 6e-10 gi|40789270 zinc finger protein 573 [Homo sapiens] 44 1e-04 gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ... 41 9e-04 gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ... 41 9e-04 gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo ... 41 9e-04 gi|39995059 caspase 2 isoform 1 preproprotein [Homo sapiens] 40 0.001 gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo... 40 0.003 gi|209870079 caspase 5 isoform f precursor [Homo sapiens] 37 0.013 gi|209870073 caspase 5 isoform c [Homo sapiens] 37 0.013 gi|209870071 caspase 5 isoform b precursor [Homo sapiens] 37 0.013 gi|209870069 caspase 5 isoform a precursor [Homo sapiens] 37 0.013 gi|238908517 colony stimulating factor 2 receptor alpha chain is... 37 0.022 gi|150378454 sarcoglycan, epsilon isoform 1 [Homo sapiens] 36 0.037 gi|149588643 zinc finger protein 283 [Homo sapiens] 36 0.037 gi|239757977 PREDICTED: similar to CYorf16 protein [Homo sapiens] 35 0.048 >gi|15718702 caspase 7 isoform beta [Homo sapiens] Length = 253 Score = 520 bits (1339), Expect = e-148 Identities = 253/253 (100%), Positives = 253/253 (100%) Query: 1 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY Sbjct: 1 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60 Query: 61 NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120 NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ Sbjct: 61 NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120 Query: 121 DLLKKASEEDHTNAACFACILLSHGEENMESCSVTQAGVQRRDLGRLQPPPPRLAEGPSL 180 DLLKKASEEDHTNAACFACILLSHGEENMESCSVTQAGVQRRDLGRLQPPPPRLAEGPSL Sbjct: 121 DLLKKASEEDHTNAACFACILLSHGEENMESCSVTQAGVQRRDLGRLQPPPPRLAEGPSL 180 Query: 181 MMASRPTRGPSMTQMLILDTRSQWKLTSSSPIPRFQAITRGGAQEEAPGLCKPSAPSWRS 240 MMASRPTRGPSMTQMLILDTRSQWKLTSSSPIPRFQAITRGGAQEEAPGLCKPSAPSWRS Sbjct: 181 MMASRPTRGPSMTQMLILDTRSQWKLTSSSPIPRFQAITRGGAQEEAPGLCKPSAPSWRS 240 Query: 241 TEKTWKSCRSSPG 253 TEKTWKSCRSSPG Sbjct: 241 TEKTWKSCRSSPG 253 >gi|15718698 caspase 7 isoform delta [Homo sapiens] Length = 336 Score = 306 bits (783), Expect = 1e-83 Identities = 148/149 (99%), Positives = 149/149 (100%) Query: 1 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY Sbjct: 34 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 93 Query: 61 NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120 NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ Sbjct: 94 NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 153 Query: 121 DLLKKASEEDHTNAACFACILLSHGEENM 149 DLLKKASEEDHTNAACFACILLSHGEEN+ Sbjct: 154 DLLKKASEEDHTNAACFACILLSHGEENV 182 >gi|15718700 caspase 7 isoform alpha [Homo sapiens] Length = 303 Score = 306 bits (783), Expect = 1e-83 Identities = 148/149 (99%), Positives = 149/149 (100%) Query: 1 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY Sbjct: 1 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60 Query: 61 NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120 NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ Sbjct: 61 NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120 Query: 121 DLLKKASEEDHTNAACFACILLSHGEENM 149 DLLKKASEEDHTNAACFACILLSHGEEN+ Sbjct: 121 DLLKKASEEDHTNAACFACILLSHGEENV 149 >gi|4502581 caspase 7 isoform alpha precursor [Homo sapiens] Length = 303 Score = 306 bits (783), Expect = 1e-83 Identities = 148/149 (99%), Positives = 149/149 (100%) Query: 1 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY Sbjct: 1 MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60 Query: 61 NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120 NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ Sbjct: 61 NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120 Query: 121 DLLKKASEEDHTNAACFACILLSHGEENM 149 DLLKKASEEDHTNAACFACILLSHGEEN+ Sbjct: 121 DLLKKASEEDHTNAACFACILLSHGEENV 149 >gi|14790115 caspase 3 preproprotein [Homo sapiens] Length = 277 Score = 91.7 bits (226), Expect = 6e-19 Identities = 43/90 (47%), Positives = 63/90 (70%) Query: 60 YNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKM 119 Y M++ ++G CIIINNKNF K TGM R+GTD DA L + FR+L ++V ND + ++ Sbjct: 37 YKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEI 96 Query: 120 QDLLKKASEEDHTNAACFACILLSHGEENM 149 +L++ S+EDH+ + F C+LLSHGEE + Sbjct: 97 VELMRDVSKEDHSKRSSFVCVLLSHGEEGI 126 >gi|14790119 caspase 3 preproprotein [Homo sapiens] Length = 277 Score = 91.7 bits (226), Expect = 6e-19 Identities = 43/90 (47%), Positives = 63/90 (70%) Query: 60 YNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKM 119 Y M++ ++G CIIINNKNF K TGM R+GTD DA L + FR+L ++V ND + ++ Sbjct: 37 YKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEI 96 Query: 120 QDLLKKASEEDHTNAACFACILLSHGEENM 149 +L++ S+EDH+ + F C+LLSHGEE + Sbjct: 97 VELMRDVSKEDHSKRSSFVCVLLSHGEEGI 126 >gi|122056476 caspase 8 isoform G precursor [Homo sapiens] Length = 538 Score = 69.7 bits (169), Expect = 2e-12 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%) Query: 60 YNMNFEKLGKCIIINNKNF-------DKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYN 112 Y M + G C+IINN NF K+ + RNGT DA AL F L F++ ++ Sbjct: 285 YQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD 344 Query: 113 DCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENM 149 DC+ ++ ++LK DH+N CF C +LSHG++ + Sbjct: 345 DCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDKGI 381 >gi|122056474 caspase 8 isoform C precursor [Homo sapiens] Length = 464 Score = 69.7 bits (169), Expect = 2e-12 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%) Query: 60 YNMNFEKLGKCIIINNKNF-------DKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYN 112 Y M + G C+IINN NF K+ + RNGT DA AL F L F++ ++ Sbjct: 211 YQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD 270 Query: 113 DCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENM 149 DC+ ++ ++LK DH+N CF C +LSHG++ + Sbjct: 271 DCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDKGI 307 >gi|15718708 caspase 8 isoform C precursor [Homo sapiens] Length = 464 Score = 69.7 bits (169), Expect = 2e-12 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%) Query: 60 YNMNFEKLGKCIIINNKNF-------DKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYN 112 Y M + G C+IINN NF K+ + RNGT DA AL F L F++ ++ Sbjct: 211 YQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD 270 Query: 113 DCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENM 149 DC+ ++ ++LK DH+N CF C +LSHG++ + Sbjct: 271 DCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDKGI 307 >gi|15718706 caspase 8 isoform B precursor [Homo sapiens] Length = 479 Score = 69.7 bits (169), Expect = 2e-12 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%) Query: 60 YNMNFEKLGKCIIINNKNF-------DKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYN 112 Y M + G C+IINN NF K+ + RNGT DA AL F L F++ ++ Sbjct: 226 YQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD 285 Query: 113 DCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENM 149 DC+ ++ ++LK DH+N CF C +LSHG++ + Sbjct: 286 DCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDKGI 322 >gi|15718704 caspase 8 isoform A precursor [Homo sapiens] Length = 496 Score = 69.7 bits (169), Expect = 2e-12 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%) Query: 60 YNMNFEKLGKCIIINNKNF-------DKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYN 112 Y M + G C+IINN NF K+ + RNGT DA AL F L F++ ++ Sbjct: 243 YQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD 302 Query: 113 DCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENM 149 DC+ ++ ++LK DH+N CF C +LSHG++ + Sbjct: 303 DCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDKGI 339 >gi|47078272 caspase 10 isoform d preproprotein [Homo sapiens] Length = 522 Score = 64.7 bits (156), Expect = 7e-11 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 11/153 (7%) Query: 33 PSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDK 92 PSL S+ + + ++ + Y MN G C+I+NN +F T + R GT K Sbjct: 249 PSLVSRGMQGASANTLNSETSTKRAAVYRMNRNHRGLCVIVNNHSF---TSLKDRQGTHK 305 Query: 93 DAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKAS-EEDHTNAACFACILLSHGEENMES 151 DAE L F+ LGF V ++N+ + +M+ +L+K H + CF +L+HG Sbjct: 306 DAEILSHVFQWLGFTVHIHNNVTKVEMEMVLQKQKCNPAHADGDCFVFCILTHGRFGAVY 365 Query: 152 CSVTQAGVQRRDL----GRLQPPPPRLAEGPSL 180 S +A + R++ LQ PRLAE P L Sbjct: 366 SS-DEALIPIREIMSHFTALQ--CPRLAEKPKL 395 >gi|47078269 caspase 10 isoform b preproprotein [Homo sapiens] Length = 521 Score = 64.7 bits (156), Expect = 7e-11 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 11/153 (7%) Query: 33 PSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDK 92 PSL S+ + + ++ + Y MN G C+I+NN +F T + R GT K Sbjct: 249 PSLVSRGMQGASANTLNSETSTKRAAVYRMNRNHRGLCVIVNNHSF---TSLKDRQGTHK 305 Query: 93 DAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKAS-EEDHTNAACFACILLSHGEENMES 151 DAE L F+ LGF V ++N+ + +M+ +L+K H + CF +L+HG Sbjct: 306 DAEILSHVFQWLGFTVHIHNNVTKVEMEMVLQKQKCNPAHADGDCFVFCILTHGRFGAVY 365 Query: 152 CSVTQAGVQRRDL----GRLQPPPPRLAEGPSL 180 S +A + R++ LQ PRLAE P L Sbjct: 366 SS-DEALIPIREIMSHFTALQ--CPRLAEKPKL 395 >gi|47078267 caspase 10 isoform a preproprotein [Homo sapiens] Length = 479 Score = 63.2 bits (152), Expect = 2e-10 Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 12/151 (7%) Query: 36 FSKKKKNVTMRSIKTTRDRVPTYQ-YNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDA 94 + +++ V+ +KT + +P Y MN G C+I+NN +F T + R GT KDA Sbjct: 208 YQGEEELVSQTDVKTFLEALPRAAVYRMNRNHRGLCVIVNNHSF---TSLKDRQGTHKDA 264 Query: 95 EALFKCFRSLGFDVIVYNDCSCAKMQDLLKKAS-EEDHTNAACFACILLSHGEENMESCS 153 E L F+ LGF V ++N+ + +M+ +L+K H + CF +L+HG S Sbjct: 265 EILSHVFQWLGFTVHIHNNVTKVEMEMVLQKQKCNPAHADGDCFVFCILTHGRFGAVYSS 324 Query: 154 VTQAGVQRRDL----GRLQPPPPRLAEGPSL 180 +A + R++ LQ PRLAE P L Sbjct: 325 -DEALIPIREIMSHFTALQ--CPRLAEKPKL 352 >gi|14790124 caspase 9 isoform alpha preproprotein [Homo sapiens] Length = 416 Score = 63.2 bits (152), Expect = 2e-10 Identities = 33/86 (38%), Positives = 49/86 (56%) Query: 60 YNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKM 119 Y ++ E G C+IINN NF + +G+ R G++ D E L + F SL F V V D + KM Sbjct: 153 YILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKM 212 Query: 120 QDLLKKASEEDHTNAACFACILLSHG 145 L + +++DH C ++LSHG Sbjct: 213 VLALLELAQQDHGALDCCVVVILSHG 238 >gi|14916483 caspase 6 isoform alpha preproprotein [Homo sapiens] Length = 293 Score = 61.6 bits (148), Expect = 6e-10 Identities = 31/93 (33%), Positives = 48/93 (51%) Query: 56 PTYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCS 115 P +Y M+ + G +I N++ F + R GT D + L + F LGF+V +ND Sbjct: 33 PAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLK 92 Query: 116 CAKMQDLLKKASEEDHTNAACFACILLSHGEEN 148 ++ + + S H +A CF C+ LSHGE N Sbjct: 93 AEELLLKIHEVSTVSHADADCFVCVFLSHGEGN 125 >gi|40789270 zinc finger protein 573 [Homo sapiens] Length = 607 Score = 43.9 bits (102), Expect = 1e-04 Identities = 20/28 (71%), Positives = 21/28 (75%) Query: 149 MESCSVTQAGVQRRDLGRLQPPPPRLAE 176 MESCSV QAGVQ DL LQPPPPR + Sbjct: 1 MESCSVAQAGVQWPDLSSLQPPPPRFKQ 28 >gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo sapiens] Length = 299 Score = 41.2 bits (95), Expect = 9e-04 Identities = 21/25 (84%), Positives = 21/25 (84%), Gaps = 1/25 (4%) Query: 149 MESCSVTQAGVQ-RRDLGRLQPPPP 172 MESCSVTQAGVQ DLG LQPPPP Sbjct: 127 MESCSVTQAGVQWCDDLGSLQPPPP 151 >gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo sapiens] Length = 299 Score = 41.2 bits (95), Expect = 9e-04 Identities = 21/25 (84%), Positives = 21/25 (84%), Gaps = 1/25 (4%) Query: 149 MESCSVTQAGVQ-RRDLGRLQPPPP 172 MESCSVTQAGVQ DLG LQPPPP Sbjct: 127 MESCSVTQAGVQWCDDLGSLQPPPP 151 >gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo sapiens] Length = 299 Score = 41.2 bits (95), Expect = 9e-04 Identities = 21/25 (84%), Positives = 21/25 (84%), Gaps = 1/25 (4%) Query: 149 MESCSVTQAGVQ-RRDLGRLQPPPP 172 MESCSVTQAGVQ DLG LQPPPP Sbjct: 127 MESCSVTQAGVQWCDDLGSLQPPPP 151 >gi|39995059 caspase 2 isoform 1 preproprotein [Homo sapiens] Length = 452 Score = 40.4 bits (93), Expect = 0.001 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%) Query: 60 YNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKM 119 Y + G ++++N +F + R+G D D L F+ LG+DV V D + +M Sbjct: 192 YRLQSRPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVLCDQTAQEM 251 Query: 120 QDLLKK-ASEEDHTNAACFACILLSHGEE 147 Q+ L+ A H LLSHG E Sbjct: 252 QEKLQNFAQLPAHRVTDSCIVALLSHGVE 280 >gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo sapiens] Length = 165 Score = 39.7 bits (91), Expect = 0.003 Identities = 19/24 (79%), Positives = 19/24 (79%) Query: 149 MESCSVTQAGVQRRDLGRLQPPPP 172 MES V QAGVQ RDLG LQPPPP Sbjct: 27 MESRCVPQAGVQWRDLGSLQPPPP 50 >gi|209870079 caspase 5 isoform f precursor [Homo sapiens] Length = 447 Score = 37.4 bits (85), Expect = 0.013 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 6/125 (4%) Query: 22 VDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKV 81 ++A P S+ ++ + +R K D + Y ++ +II N FD + Sbjct: 162 IEAGPPESAESTNILKLCPREEFLRLCKKNHDEI--YPIKKREDRRRLALIICNTKFDHL 219 Query: 82 TGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKK-ASEEDHTNAACFACI 140 RNG D + + + LG+ V+ + + M+ +L+ A+ +H ++ + Sbjct: 220 PA---RNGAHYDIVGMKRLLQGLGYTVVDEKNLTARDMESVLRAFAARPEHKSSDSTFLV 276 Query: 141 LLSHG 145 L+SHG Sbjct: 277 LMSHG 281 >gi|209870073 caspase 5 isoform c [Homo sapiens] Length = 292 Score = 37.4 bits (85), Expect = 0.013 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 6/125 (4%) Query: 22 VDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKV 81 ++A P S+ ++ + +R K D + Y ++ +II N FD + Sbjct: 7 IEAGPPESAESTNILKLCPREEFLRLCKKNHDEI--YPIKKREDRRRLALIICNTKFDHL 64 Query: 82 TGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKK-ASEEDHTNAACFACI 140 RNG D + + + LG+ V+ + + M+ +L+ A+ +H ++ + Sbjct: 65 PA---RNGAHYDIVGMKRLLQGLGYTVVDEKNLTARDMESVLRAFAARPEHKSSDSTFLV 121 Query: 141 LLSHG 145 L+SHG Sbjct: 122 LMSHG 126 >gi|209870071 caspase 5 isoform b precursor [Homo sapiens] Length = 376 Score = 37.4 bits (85), Expect = 0.013 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 6/125 (4%) Query: 22 VDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKV 81 ++A P S+ ++ + +R K D + Y ++ +II N FD + Sbjct: 91 IEAGPPESAESTNILKLCPREEFLRLCKKNHDEI--YPIKKREDRRRLALIICNTKFDHL 148 Query: 82 TGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKK-ASEEDHTNAACFACI 140 RNG D + + + LG+ V+ + + M+ +L+ A+ +H ++ + Sbjct: 149 PA---RNGAHYDIVGMKRLLQGLGYTVVDEKNLTARDMESVLRAFAARPEHKSSDSTFLV 205 Query: 141 LLSHG 145 L+SHG Sbjct: 206 LMSHG 210 >gi|209870069 caspase 5 isoform a precursor [Homo sapiens] Length = 434 Score = 37.4 bits (85), Expect = 0.013 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 6/125 (4%) Query: 22 VDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKV 81 ++A P S+ ++ + +R K D + Y ++ +II N FD + Sbjct: 149 IEAGPPESAESTNILKLCPREEFLRLCKKNHDEI--YPIKKREDRRRLALIICNTKFDHL 206 Query: 82 TGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKK-ASEEDHTNAACFACI 140 RNG D + + + LG+ V+ + + M+ +L+ A+ +H ++ + Sbjct: 207 PA---RNGAHYDIVGMKRLLQGLGYTVVDEKNLTARDMESVLRAFAARPEHKSSDSTFLV 263 Query: 141 LLSHG 145 L+SHG Sbjct: 264 LMSHG 268 >gi|238908517 colony stimulating factor 2 receptor alpha chain isoform f precursor [Homo sapiens] Length = 434 Score = 36.6 bits (83), Expect = 0.022 Identities = 18/24 (75%), Positives = 19/24 (79%) Query: 151 SCSVTQAGVQRRDLGRLQPPPPRL 174 S SVTQAGVQ +LG LQPP PRL Sbjct: 317 SHSVTQAGVQWHNLGSLQPPSPRL 340 >gi|150378454 sarcoglycan, epsilon isoform 1 [Homo sapiens] Length = 462 Score = 35.8 bits (81), Expect = 0.037 Identities = 16/20 (80%), Positives = 16/20 (80%) Query: 154 VTQAGVQRRDLGRLQPPPPR 173 V QAGVQ DLG LQPPPPR Sbjct: 424 VAQAGVQWSDLGSLQPPPPR 443 >gi|149588643 zinc finger protein 283 [Homo sapiens] Length = 679 Score = 35.8 bits (81), Expect = 0.037 Identities = 18/24 (75%), Positives = 18/24 (75%) Query: 149 MESCSVTQAGVQRRDLGRLQPPPP 172 MES SV QAGVQ DLG LQ PPP Sbjct: 1 MESRSVAQAGVQWCDLGSLQAPPP 24 >gi|239757977 PREDICTED: similar to CYorf16 protein [Homo sapiens] Length = 140 Score = 35.4 bits (80), Expect = 0.048 Identities = 18/35 (51%), Positives = 21/35 (60%) Query: 145 GEENMESCSVTQAGVQRRDLGRLQPPPPRLAEGPS 179 G MES VTQAGV+ DLG LQ PP + P+ Sbjct: 103 GISEMESHYVTQAGVKWHDLGSLQTLPPSFKDSPT 137 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.130 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,301,622 Number of Sequences: 37866 Number of extensions: 549698 Number of successful extensions: 1953 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 26 Number of HSP's that attempted gapping in prelim test: 1889 Number of HSP's gapped (non-prelim): 76 length of query: 253 length of database: 18,247,518 effective HSP length: 100 effective length of query: 153 effective length of database: 14,460,918 effective search space: 2212520454 effective search space used: 2212520454 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.