Guide to the Human Genome
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Name: ZNF573 Sequence: fasta or formatted (607aa) NCBI GI: 40789270
Description:

zinc finger protein 573

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.8         17           1
 C cysteine            6.8         41           1
 D aspartate           1.2          7           1
 E glutamate           7.7         47           1
 F phenylalanine       4.8         29           1
 G glycine             7.9         48           2
 H histidine           7.6         46           2
 I isoleucine          4.1         25           2
 K lysine             12.0         73           2
 L leucine             5.8         35           2
 M methionine          0.5          3           1
 N asparagine          1.8         11           1
 P proline             3.3         20           4
 Q glutamine           6.8         41           1
 R arginine            5.4         33           2
 S serine              5.3         32           2
 T threonine           7.7         47           2
 V valine              2.6         16           1
 W tryptophan          0.2          1           1
 Y tyrosine            5.8         35           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 573 
ZNF420                0.529   zinc finger protein 420 
ZNF184                0.504   zinc finger protein 184 
ZNF546                0.502   zinc finger protein 546 
ZNF780B               0.502   zinc finger protein 780B 
ZNF30                 0.485   zinc finger protein 30 isoform b 
ZNF30                 0.485   zinc finger protein 30 isoform a 
ZNF30                 0.485   zinc finger protein 30 isoform a 
ZNF160                0.480   zinc finger protein 160 
ZNF160                0.480   zinc finger protein 160 
ZNF160                0.480   zinc finger protein 160 
ZNF208                0.475   zinc finger protein 208 
LOC100287429          0.475   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.475   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.475   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.475   zinc finger protein 84 
ZNF84                 0.475   zinc finger protein 84 
ZNF43                 0.473   zinc finger protein 43 
ZNF347                0.472   zinc finger protein 347 
ZNF616                0.471   zinc finger protein 616 
ZNF658                0.470   zinc finger protein 658 
ZNF268                0.469   zinc finger protein 268 
ZNF780A               0.469   zinc finger protein 780A isoform b 
ZNF780A               0.469   zinc finger protein 780A isoform b 
ZNF780A               0.469   zinc finger protein 780A isoform a 
ZNF665                0.468   zinc finger protein 665 
ZNF607                0.465   zinc finger protein 607 
ZNF91                 0.465   zinc finger protein 91 
ZNF624                0.461   zinc finger protein 624 
ZNF721                0.460   zinc finger protein 721 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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