Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: EPN2 Sequence: fasta or formatted (356aa) NCBI GI: 156671219
Description:

epsin 2 isoform c

Referenced in:

Additional Membrane Functions

Other entries for this name:
alt prot [641aa] epsin 2 isoform b
alt prot [584aa] epsin 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         41           2
 C cysteine            0.0          0           0
 D aspartate           3.9         14           2
 E glutamate           3.9         14           2
 F phenylalanine       3.1         11           1
 G glycine             7.6         27           2
 H histidine           0.3          1           1
 I isoleucine          1.1          4           1
 K lysine              3.9         14           3
 L leucine             8.1         29           2
 M methionine          2.2          8           2
 N asparagine          4.5         16           2
 P proline            12.6         45           2
 Q glutamine           5.1         18           2
 R arginine            3.4         12           2
 S serine             13.2         47           2
 T threonine           8.4         30           2
 V valine              5.3         19           1
 W tryptophan          1.7          6           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epsin 2 isoform c 
EPN2                  1.000   epsin 2 isoform a 
EPN2                  1.000   epsin 2 isoform b 
EPN1                  0.239   epsin 1 isoform a 
EPN1                  0.237   epsin 1 isoform c 
EPN1                  0.233   epsin 1 isoform b 
EPN3                  0.121   epsin 3 
MUC2                  0.042   mucin 2 precursor 
FLJ22184              0.041   PREDICTED: hypothetical protein FLJ22184 
AGFG1                 0.039   HIV-1 Rev binding protein isoform 3 
FLJ22184              0.039   PREDICTED: hypothetical protein LOC80164 
ZNF828                0.036   zinc finger protein 828 
NACA                  0.036   nascent polypeptide-associated complex alpha subuni...
NUP214                0.035   nucleoporin 214kDa 
AGFG1                 0.035   HIV-1 Rev binding protein isoform 1 
AGFG1                 0.035   HIV-1 Rev binding protein isoform 2 
LOC100294420          0.035   PREDICTED: similar to mucin 2 
NHSL1                 0.033   NHS-like 1 
FAM65A                0.033   hypothetical protein LOC79567 
AGFG2                 0.033   ArfGAP with FG repeats 2 
SNAP91                0.032   synaptosomal-associated protein, 91kDa homolog 
KIAA0754              0.032   hypothetical protein LOC643314 
ATF7IP                0.032   activating transcription factor 7 interacting protei...
AGFG1                 0.029   HIV-1 Rev binding protein isoform 4 
SALL3                 0.029   sal-like 3 
MUC7                  0.028   mucin 7, secreted precursor 
MUC7                  0.028   mucin 7, secreted precursor 
MUC7                  0.028   mucin 7, secreted precursor 
SRCAP                 0.028   Snf2-related CBP activator protein 
DNM1                  0.026   dynamin 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press