Guide to the Human Genome
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Name: EPN3 Sequence: fasta or formatted (632aa) NCBI GI: 157388929
Description:

epsin 3

Referenced in:

Additional Membrane Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         51           1
 C cysteine            0.5          3           1
 D aspartate           4.7         30           1
 E glutamate           7.1         45           3
 F phenylalanine       2.4         15           1
 G glycine             7.8         49           2
 H histidine           1.7         11           2
 I isoleucine          1.9         12           1
 K lysine              4.1         26           1
 L leucine            10.3         65           2
 M methionine          1.7         11           1
 N asparagine          2.8         18           1
 P proline            11.1         70           4
 Q glutamine           4.3         27           1
 R arginine            6.0         38           2
 S serine             11.6         73           5
 T threonine           6.5         41           2
 V valine              4.1         26           2
 W tryptophan          1.7         11           1
 Y tyrosine            1.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epsin 3 
EPN1                  0.335   epsin 1 isoform b 
EPN2                  0.326   epsin 2 isoform a 
EPN1                  0.311   epsin 1 isoform c 
EPN1                  0.310   epsin 1 isoform a 
EPN2                  0.303   epsin 2 isoform b 
ENTHD1                0.147   ENTH domain containing 1 
CLINT1                0.117   epsin 4 
EPN2                  0.066   epsin 2 isoform c 
NACA                  0.029   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.025   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.023   PREDICTED: hypothetical protein FLJ22184 
POLR2A                0.023   DNA-directed RNA polymerase II A 
LOC100133756          0.022   PREDICTED: hypothetical protein, partial 
CIC                   0.022   capicua homolog 
SETD1B                0.021   SET domain containing 1B 
MLL2                  0.021   myeloid/lymphoid or mixed-lineage leukemia 2 
PCLO                  0.021   piccolo isoform 2 
PCLO                  0.021   piccolo isoform 1 
MUC2                  0.021   mucin 2 precursor 
GLTSCR1               0.019   glioma tumor suppressor candidate region gene 1 [Ho...
SRCAP                 0.019   Snf2-related CBP activator protein 
MAP1A                 0.018   microtubule-associated protein 1A 
PRG4                  0.017   proteoglycan 4 isoform B 
PRG4                  0.017   proteoglycan 4 isoform A 
SMARCC2               0.017   SWI/SNF-related matrix-associated actin-dependent re...
PRG4                  0.016   proteoglycan 4 isoform D 
PRG4                  0.016   proteoglycan 4 isoform C 
FAM71E2               0.016   hypothetical protein LOC284418 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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