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Search of human proteins with 156627565
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156627565 Rh-associated glycoprotein [Homo sapiens]
(409 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156627565 Rh-associated glycoprotein [Homo sapiens] 812 0.0
gi|7706683 Rh family, C glycoprotein [Homo sapiens] 451 e-127
gi|224548945 Rhesus blood group, B glycoprotein [Homo sapiens] 413 e-115
gi|20336225 Rh blood group D antigen isoform 1 [Homo sapiens] 241 7e-64
gi|66346664 Rhesus blood group, CcEe antigens isoform 1 [Homo sa... 239 3e-63
gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens] 204 1e-52
gi|66346670 Rhesus blood group, CcEe antigens isoform 2 [Homo sa... 196 4e-50
gi|66346668 Rhesus blood group, CcEe antigens isoform 4 [Homo sa... 89 7e-18
gi|66346666 Rhesus blood group, CcEe antigens isoform 3 [Homo sa... 89 7e-18
gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens] 35 0.094
gi|14211919 solute carrier family 9, member 7 [Homo sapiens] 33 0.61
gi|14149631 ring finger protein 112 [Homo sapiens] 31 2.3
gi|239746767 PREDICTED: hypothetical protein [Homo sapiens] 30 3.0
gi|194239659 transmembrane and coiled-coil domains 4 [Homo sapiens] 30 3.0
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 30 4.0
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 30 4.0
gi|169164452 PREDICTED: similar to hCG1643669 [Homo sapiens] 30 5.2
gi|169164815 PREDICTED: similar to hCG1643669 [Homo sapiens] 30 5.2
gi|169163509 PREDICTED: hypothetical protein LOC100131482 [Homo ... 30 5.2
gi|148746189 multiple PDZ domain protein [Homo sapiens] 29 6.7
gi|218563754 acyl-Coenzyme A oxidase-like 3 [Homo sapiens] 29 6.7
gi|157502163 acyl-Coenzyme A oxidase-like 2 [Homo sapiens] 29 6.7
gi|154146231 DMRT-like family A2 [Homo sapiens] 29 8.8
>gi|156627565 Rh-associated glycoprotein [Homo sapiens]
Length = 409
Score = 812 bits (2098), Expect = 0.0
Identities = 409/409 (100%), Positives = 409/409 (100%)
Query: 1 MRFTFPLMAIVLEIAMIVLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYPLFQDVHVM 60
MRFTFPLMAIVLEIAMIVLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYPLFQDVHVM
Sbjct: 1 MRFTFPLMAIVLEIAMIVLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYPLFQDVHVM 60
Query: 61 IFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGILQSQGQKFNIGIKNMINADF 120
IFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGILQSQGQKFNIGIKNMINADF
Sbjct: 61 IFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGILQSQGQKFNIGIKNMINADF 120
Query: 121 SAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFGAY 180
SAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFGAY
Sbjct: 121 SAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFGAY 180
Query: 181 FGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQCRAI 240
FGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQCRAI
Sbjct: 181 FGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQCRAI 240
Query: 241 VNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMIIG 300
VNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMIIG
Sbjct: 241 VNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMIIG 300
Query: 301 SIAGMVSVLGYKFLTPLFTTKLRIHDTCGVHNLHGLPGVVGGLAGIVAVAMGASNTSMAM 360
SIAGMVSVLGYKFLTPLFTTKLRIHDTCGVHNLHGLPGVVGGLAGIVAVAMGASNTSMAM
Sbjct: 301 SIAGMVSVLGYKFLTPLFTTKLRIHDTCGVHNLHGLPGVVGGLAGIVAVAMGASNTSMAM 360
Query: 361 QAAALGSSIGTAVVGGLMTGLILKLPLWGQPSDQNCYDDSVYWKVPKTR 409
QAAALGSSIGTAVVGGLMTGLILKLPLWGQPSDQNCYDDSVYWKVPKTR
Sbjct: 361 QAAALGSSIGTAVVGGLMTGLILKLPLWGQPSDQNCYDDSVYWKVPKTR 409
>gi|7706683 Rh family, C glycoprotein [Homo sapiens]
Length = 479
Score = 451 bits (1159), Expect = e-127
Identities = 220/434 (50%), Positives = 298/434 (68%), Gaps = 27/434 (6%)
Query: 1 MRFTFPLMAIVLEIAMIVLFGLFVEY--ETDQTVLEQLNITKPTDM-GIFFELYPLFQDV 57
+R+ PL ++L++ M++LFG+FV Y E D + +DM F+ YP FQDV
Sbjct: 7 LRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRYPSFQDV 66
Query: 58 HVMIFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGILQS-QGQKFNIGIKNMI 116
HVM+FVGFGFLMTFL++YGFS+VG N L+AA G+QW ++QG Q + +G++N+I
Sbjct: 67 HVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENLI 126
Query: 117 NADFSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHA 176
NADF A+V ++FGAVLGK SP Q+LIMT ++ FA NE+++ + K D G SMTIH
Sbjct: 127 NADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGGSMTIHT 186
Query: 177 FGAYFGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQ 236
FGAYFGL V ILYR L + E + S Y SDLFAMIGTLFLWM+WPSFNSAI+ GD Q
Sbjct: 187 FGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDSQ 246
Query: 237 CRAIVNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGS 296
RA +NTY SLAACVLT+ A SS + +GKL+MVHIQNATLAGGVAVGT A+M + P+G+
Sbjct: 247 HRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYGA 306
Query: 297 MIIGSIAGMVSVLGYKFLTPLFTTKLRIHDTCGVHNLHGLPGVVGGLAGIVAVAMGA--- 353
+IIG + G++S LG+ +LTP ++L I DTCG++NLHG+PG++GG+ G V A +
Sbjct: 307 LIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAASASLEV 366
Query: 354 --------------------SNTSMAMQAAALGSSIGTAVVGGLMTGLILKLPLWGQPSD 393
+ T Q L ++ A++GG++ GLIL+LP WGQPSD
Sbjct: 367 YGKEGLVHSFDFQGFNGDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPFWGQPSD 426
Query: 394 QNCYDDSVYWKVPK 407
+NC++D+VYW++P+
Sbjct: 427 ENCFEDAVYWEMPE 440
>gi|224548945 Rhesus blood group, B glycoprotein [Homo sapiens]
Length = 458
Score = 413 bits (1061), Expect = e-115
Identities = 215/429 (50%), Positives = 279/429 (65%), Gaps = 26/429 (6%)
Query: 2 RFTFPLMAIVLEIAMIVLFGLFVEY--ETDQTVLEQLNITKPTDMGIFFELYPLFQDVHV 59
R PL+ + L+ A VLF +FV Y +TD + + N + + F+ YP FQDVH
Sbjct: 12 RLQLPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNE--FYFRYPSFQDVHA 69
Query: 60 MIFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGILQS-QGQKFNIGIKNMINA 118
M+FVGFGFLM FL++YGFSSVG L+AA LQW T+VQG L S G ++G+++MINA
Sbjct: 70 MVFVGFGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMINA 129
Query: 119 DFSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFG 178
DF A VLISFGAVLGKT PTQ+L+M +LE+V F NE+++ + D G SMTIH FG
Sbjct: 130 DFCAGAVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAGGSMTIHTFG 189
Query: 179 AYFGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQCR 238
AYFGL ++ +LYR L K + S Y+SDLFAMIGT+FLW+FWPSFN+A+ G Q R
Sbjct: 190 AYFGLVLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAALTALGAGQHR 249
Query: 239 AIVNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMI 298
+NTY+SLAA L FA S+LV G+L+MVHIQNA LAGGV VGT ++M + PFG++
Sbjct: 250 TALNTYYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEMMLTPFGALA 309
Query: 299 IGSIAGMVSVLGYKFLTPLFTTKLRIHDTCGVHNLHGLPGVVGGLAGIVAVAMGA----- 353
G +AG VS LGYKF TP+ +K ++ DTCGVHNLHG+PGV+G L G++ +
Sbjct: 310 AGFLAGTVSTLGYKFFTPILESKFKVQDTCGVHNLHGMPGVLGALLGVLVAGLATHEAYG 369
Query: 354 ---------------SNTSMAM-QAAALGSSIGTAVVGGLMTGLILKLPLWGQPSDQNCY 397
S TS AM Q L ++ A VGG + GL+LKLP P D Y
Sbjct: 370 DGLESVFPLIAEGQRSATSQAMHQLFGLFVTLMFASVGGGLGGLLLKLPFLDSPPDSQHY 429
Query: 398 DDSVYWKVP 406
+D V+W+VP
Sbjct: 430 EDQVHWQVP 438
>gi|20336225 Rh blood group D antigen isoform 1 [Homo sapiens]
Length = 417
Score = 241 bits (616), Expect = 7e-64
Identities = 149/414 (35%), Positives = 230/414 (55%), Gaps = 19/414 (4%)
Query: 1 MRFTFPLMAIVLEIAMIVLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYPLFQDVHVM 60
+R PL A+ LE A+I+LF F Y D ++ +Q + +G QD+ VM
Sbjct: 9 VRRCLPLWALTLEAALILLFYFFTHY--DASLEDQKGLVASYQVG---------QDLTVM 57
Query: 61 IFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGIL-QSQGQKFNIGIKNMINAD 119
+G GFL + +++ +SSV NL + ALG+QW ++ G L Q K I + ++ A
Sbjct: 58 AAIGLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLAT 117
Query: 120 FSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFGA 179
SA +VLIS AVLGK + Q+++M ++E+ + ++S IF M I+ F A
Sbjct: 118 MSALSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAA 177
Query: 180 YFGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQCRA 239
YFGL+VA L + + +++A L AM+G LFLWMFWPSFNSA+ ++ A
Sbjct: 178 YFGLSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNA 237
Query: 240 IVNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMII 299
+ NTY+++A V+TA + SSL +GK++ ++ +A LAGGVAVGT + P+ +M++
Sbjct: 238 VFNTYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVL 297
Query: 300 GSIAGMVSVLGYKFLTPLFTTKLRI-HDTCGVHN--LHGLPGVVGGLAGIVAVAMGASNT 356
G +AG++SV G K+L L I H + +N L GL G + + +V +GA N
Sbjct: 298 GLVAGLISVGGAKYLPGCCNRVLGIPHSSIMGYNFSLLGLLGEIIYIVLLVLDTVGAGNG 357
Query: 357 SMAMQA----AALGSSIGTAVVGGLMTGLILKLPLWGQPSDQNCYDDSVYWKVP 406
+ Q L +I A+ GL+TGL+L L +W P + +DD V+WK P
Sbjct: 358 MIGFQVLLSIGELSLAIVIALTSGLLTGLLLNLKIWKAPHEAKYFDDQVFWKFP 411
>gi|66346664 Rhesus blood group, CcEe antigens isoform 1 [Homo
sapiens]
Length = 417
Score = 239 bits (610), Expect = 3e-63
Identities = 145/414 (35%), Positives = 225/414 (54%), Gaps = 19/414 (4%)
Query: 1 MRFTFPLMAIVLEIAMIVLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYPLFQDVHVM 60
+R PL A+ LE A+I+LF F Y D ++ +Q + +G QD+ VM
Sbjct: 9 VRRCLPLCALTLEAALILLFYFFTHY--DASLEDQKGLVASYQVG---------QDLTVM 57
Query: 61 IFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGIL-QSQGQKFNIGIKNMINAD 119
+G GFL + +++ +SSV NL + ALG+QW ++ G L Q K I + ++ A
Sbjct: 58 AALGLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLAT 117
Query: 120 FSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFGA 179
SA +VLIS GAVLGK + Q+++M ++E+ ++S IF + F A
Sbjct: 118 MSAMSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNTDYHMNLRHFYVFAA 177
Query: 180 YFGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQCRA 239
YFGL VA L + + +N++ A L AM+G LFLWMFWPS NSA+ ++ A
Sbjct: 178 YFGLTVAWCLPKPLPKGTEDNDQRATIPSLSAMLGALFLWMFWPSVNSALLRSPIQRKNA 237
Query: 240 IVNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMII 299
+ NTY++LA V+TA + SSL + K++M ++ +A LAGGVAVGT + P+ +M++
Sbjct: 238 MFNTYYALAVSVVTAISGSSLAHPQRKISMTYVHSAVLAGGVAVGTSCHLIPSPWLAMVL 297
Query: 300 GSIAGMVSVLGYKFLTPLFTTKLRIHDTCGVHNLHGLPGVVGGLAGIVAVAM-------G 352
G +AG++S+ G K L L IH +H++ L G++G + IV + + G
Sbjct: 298 GLVAGLISIGGAKCLPVCCNRVLGIHHISVMHSIFSLLGLLGEITYIVLLVLHTVWNGNG 357
Query: 353 ASNTSMAMQAAALGSSIGTAVVGGLMTGLILKLPLWGQPSDQNCYDDSVYWKVP 406
+ + L +I A+ GL+TGL+L L +W P +DD V+WK P
Sbjct: 358 MIGFQVLLSIGELSLAIVIALTSGLLTGLLLNLKIWKAPHVAKYFDDQVFWKFP 411
>gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens]
Length = 321
Score = 204 bits (519), Expect = 1e-52
Identities = 118/315 (37%), Positives = 184/315 (58%), Gaps = 12/315 (3%)
Query: 1 MRFTFPLMAIVLEIAMIVLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYPLFQDVHVM 60
+R PL A+ LE A+I+LF F Y D ++ +Q + +G QD+ VM
Sbjct: 9 VRRCLPLWALTLEAALILLFYFFTHY--DASLEDQKGLVASYQVG---------QDLTVM 57
Query: 61 IFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGIL-QSQGQKFNIGIKNMINAD 119
+G GFL + +++ +SSV NL + ALG+QW ++ G L Q K I + ++ A
Sbjct: 58 AAIGLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLAT 117
Query: 120 FSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFGA 179
SA +VLIS AVLGK + Q+++M ++E+ + ++S IF M I+ F A
Sbjct: 118 MSALSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAA 177
Query: 180 YFGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQCRA 239
YFGL+VA L + + +++A L AM+G LFLWMFWPSFNSA+ ++ A
Sbjct: 178 YFGLSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNA 237
Query: 240 IVNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMII 299
+ NTY+++A V+TA + SSL +GK++ ++ +A LAGGVAVGT + P+ +M++
Sbjct: 238 VFNTYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVL 297
Query: 300 GSIAGMVSVLGYKFL 314
G +AG++SV G K+L
Sbjct: 298 GLVAGLISVGGAKYL 312
>gi|66346670 Rhesus blood group, CcEe antigens isoform 2 [Homo
sapiens]
Length = 354
Score = 196 bits (497), Expect = 4e-50
Identities = 117/315 (37%), Positives = 180/315 (57%), Gaps = 12/315 (3%)
Query: 1 MRFTFPLMAIVLEIAMIVLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYPLFQDVHVM 60
+R PL A+ LE A+I+LF F Y D ++ +Q + +G QD+ VM
Sbjct: 9 VRRCLPLCALTLEAALILLFYFFTHY--DASLEDQKGLVASYQVG---------QDLTVM 57
Query: 61 IFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGIL-QSQGQKFNIGIKNMINAD 119
+G GFL + +++ +SSV NL + ALG+QW ++ G L Q K I + ++ A
Sbjct: 58 AALGLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLAT 117
Query: 120 FSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFGA 179
SA +VLIS GAVLGK + Q+++M ++E+ ++S IF + F A
Sbjct: 118 MSAMSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNTDYHMNLRHFYVFAA 177
Query: 180 YFGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQCRA 239
YFGL VA L + + +N++ A L AM+G LFLWMFWPS NSA+ ++ A
Sbjct: 178 YFGLTVAWCLPKPLPKGTEDNDQRATIPSLSAMLGALFLWMFWPSVNSALLRSPIQRKNA 237
Query: 240 IVNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMII 299
+ NTY++LA V+TA + SSL + K++M ++ +A LAGGVAVGT + P+ +M++
Sbjct: 238 MFNTYYALAVSVVTAISGSSLAHPQRKISMTYVHSAVLAGGVAVGTSCHLIPSPWLAMVL 297
Query: 300 GSIAGMVSVLGYKFL 314
G +AG++S+ G K L
Sbjct: 298 GLVAGLISIGGAKCL 312
>gi|66346668 Rhesus blood group, CcEe antigens isoform 4 [Homo
sapiens]
Length = 267
Score = 89.0 bits (219), Expect = 7e-18
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 12/164 (7%)
Query: 1 MRFTFPLMAIVLEIAMIVLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYPLFQDVHVM 60
+R PL A+ LE A+I+LF F Y D ++ +Q + +G QD+ VM
Sbjct: 9 VRRCLPLCALTLEAALILLFYFFTHY--DASLEDQKGLVASYQVG---------QDLTVM 57
Query: 61 IFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGIL-QSQGQKFNIGIKNMINAD 119
+G GFL + +++ +SSV NL + ALG+QW ++ G L Q K I + ++ A
Sbjct: 58 AALGLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLAT 117
Query: 120 FSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIF 163
SA +VLIS GAVLGK + Q+++M ++E+ ++S IF
Sbjct: 118 MSAMSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIF 161
Score = 55.1 bits (131), Expect = 1e-07
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 271 HIQNATLAGGVAVGTCADMAIHPFGSMIIGSIAGMVSVLGYKFLTPLFTTKLRIHDTCGV 330
++ +A LAGGVAVGT + P+ +M++G +AG++S+ G K L L IH +
Sbjct: 164 YVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLVAGLISIGGAKCLPVCCNRVLGIHHISVM 223
Query: 331 HNLHGLPGVVGGLAGIVAVAM 351
H++ L G++G + IV + +
Sbjct: 224 HSIFSLLGLLGEITYIVLLVL 244
>gi|66346666 Rhesus blood group, CcEe antigens isoform 3 [Homo
sapiens]
Length = 266
Score = 89.0 bits (219), Expect = 7e-18
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 12/164 (7%)
Query: 1 MRFTFPLMAIVLEIAMIVLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYPLFQDVHVM 60
+R PL A+ LE A+I+LF F Y D ++ +Q + +G QD+ VM
Sbjct: 9 VRRCLPLCALTLEAALILLFYFFTHY--DASLEDQKGLVASYQVG---------QDLTVM 57
Query: 61 IFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGIL-QSQGQKFNIGIKNMINAD 119
+G GFL + +++ +SSV NL + ALG+QW ++ G L Q K I + ++ A
Sbjct: 58 AALGLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLAT 117
Query: 120 FSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIF 163
SA +VLIS GAVLGK + Q+++M ++E+ ++S IF
Sbjct: 118 MSAMSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIF 161
Score = 53.1 bits (126), Expect = 4e-07
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 28/175 (16%)
Query: 240 IVNTYFSLAACVLTAFA-FSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMI 298
+V T FS+ ++A + S GK+N+ + L A+GT M+
Sbjct: 106 VVITLFSIRLATMSAMSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLR---------MV 156
Query: 299 IGSIAGMVSVLGYKFLTPLFTTKLRIHDTCGVHNLHGLPGVVGGLAGIVAVAM------- 351
I +I + L IH +H++ L G++G + IV + +
Sbjct: 157 ISNIFNVCC-----------NRVLGIHHISVMHSIFSLLGLLGEITYIVLLVLHTVWNGN 205
Query: 352 GASNTSMAMQAAALGSSIGTAVVGGLMTGLILKLPLWGQPSDQNCYDDSVYWKVP 406
G + + L +I A+ GL+TGL+L L +W P +DD V+WK P
Sbjct: 206 GMIGFQVLLSIGELSLAIVIALTSGLLTGLLLNLKIWKAPHVAKYFDDQVFWKFP 260
>gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens]
Length = 572
Score = 35.4 bits (80), Expect = 0.094
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 335 GLPGVVGGLAGIVAVAMGASNTSMAMQ---AAALGSSIGTAVVGGLM 378
G+PG GG G+V G N S A + A A G GTA VGGL+
Sbjct: 45 GVPGGAGGGGGVVGAGSGEDNRSSAGEPGSAGAGGDVNGTAAVGGLV 91
>gi|14211919 solute carrier family 9, member 7 [Homo sapiens]
Length = 725
Score = 32.7 bits (73), Expect = 0.61
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 355 NTSMAMQAAALGSSIGTAVVGGLMTGLILKLPLWGQPSDQNCYDDSVYW 403
N + A LG+++ ++G LM G++ + + GQ SD+ Y D +++
Sbjct: 207 NLGSILAYAFLGTAVSCFIIGNLMYGVVKLMKIMGQLSDKFYYTDCLFF 255
>gi|14149631 ring finger protein 112 [Homo sapiens]
Length = 632
Score = 30.8 bits (68), Expect = 2.3
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 335 GLPGVVGGLAGI-VAVAMGASNTSMAMQAAALGSSIGTAVVGG 376
GL G+ GG+ G +A A A+ M AA+G++ G AVVGG
Sbjct: 558 GLMGLAGGVVGAGMAAAALAAEAGMVAAGAAVGAT-GAAVVGG 599
>gi|239746767 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 30.4 bits (67), Expect = 3.0
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 12/113 (10%)
Query: 279 GGVAVGTCADMAIHPFGSMIIGSIA---GMVSVL-GYKFLTPLFTTKLRIHDTCGVHNLH 334
GG+ G C + H S G+ A G+VS G L T++R+ C + H
Sbjct: 151 GGLQAGRCMSVCRHDLVSKSDGNAAVSLGLVSKTNGSALLADAAITEVRL-SRCKRPHSH 209
Query: 335 GLPGVVGGLAGIVAVAMGASNTSMAMQAAALGSSIGTAVVGGLMTGLILKLPL 387
G + V++ + SNT ++Q A S + AV G L T L +P+
Sbjct: 210 GFTMIW------VSIIL-QSNTLHSLQTPAGNSKVACAVAGDLFTLLFPLIPM 255
>gi|194239659 transmembrane and coiled-coil domains 4 [Homo sapiens]
Length = 634
Score = 30.4 bits (67), Expect = 3.0
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 338 GVVGGLAGIVAVAMGASNTSMAMQAAALGSSIGTAVVGGL 377
GV GGLA + VA GA+ + AAALGS+ G A++ L
Sbjct: 205 GVTGGLAAPL-VAAGAATIIGSAGAAALGSAAGIAIMTSL 243
>gi|74027251 tripartite motif-containing 33 protein isoform beta
[Homo sapiens]
Length = 1110
Score = 30.0 bits (66), Expect = 4.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 335 GLPGVVGGLAGIVAVAMGASNTSMAMQAAALGSSIGTAVVGGLMT 379
G G GG AG + A+++ A A++ +S+GT V GG ++
Sbjct: 51 GRAGAEGGAAGPDDGGVAAASSGSAQAASSPAASVGTGVAGGAVS 95
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 30.0 bits (66), Expect = 4.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 335 GLPGVVGGLAGIVAVAMGASNTSMAMQAAALGSSIGTAVVGGLMT 379
G G GG AG + A+++ A A++ +S+GT V GG ++
Sbjct: 51 GRAGAEGGAAGPDDGGVAAASSGSAQAASSPAASVGTGVAGGAVS 95
>gi|169164452 PREDICTED: similar to hCG1643669 [Homo sapiens]
Length = 157
Score = 29.6 bits (65), Expect = 5.2
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 18 VLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYP------LFQDVHVMIFVGFG 66
VL+ + +E D V+ +NITK D +ELY F++ H+M+ +G G
Sbjct: 44 VLYSI-IEKVKDFAVIFLVNITKVPDFNKMYELYDPCTIMFFFRNKHIMVVLGTG 97
>gi|169164815 PREDICTED: similar to hCG1643669 [Homo sapiens]
Length = 157
Score = 29.6 bits (65), Expect = 5.2
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 18 VLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYP------LFQDVHVMIFVGFG 66
VL+ + +E D V+ +NITK D +ELY F++ H+M+ +G G
Sbjct: 44 VLYSI-IEKVKDFAVIFLVNITKVPDFNKMYELYDPCTIMFFFRNKHIMVVLGTG 97
>gi|169163509 PREDICTED: hypothetical protein LOC100131482 [Homo
sapiens]
Length = 157
Score = 29.6 bits (65), Expect = 5.2
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 18 VLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYP------LFQDVHVMIFVGFG 66
VL+ + +E D V+ +NITK D +ELY F++ H+M+ +G G
Sbjct: 44 VLYSI-IEKVKDFAVIFLVNITKVPDFNKMYELYDPCTIMFFFRNKHIMVVLGTG 97
>gi|148746189 multiple PDZ domain protein [Homo sapiens]
Length = 2041
Score = 29.3 bits (64), Expect = 6.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 366 GSSIGTAVVGGLMTGLILKLPLWGQPSDQN 395
GS +G ++GG TG+I+K L G +DQ+
Sbjct: 264 GSGLGFGIIGGKATGVIVKTILPGGVADQH 293
>gi|218563754 acyl-Coenzyme A oxidase-like 3 [Homo sapiens]
Length = 517
Score = 29.3 bits (64), Expect = 6.7
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 256 AFSSLVEHRGKLNMVHIQNATLAG-GVAVGTCADMAIHP--------FGSMIIGSIAGMV 306
A++S + H L++ H TL +AV +C D +G+ ++
Sbjct: 438 AWNSCLHHVASLSLAHTHRVTLEQFSLAVKSCPDQEDQTLLMKFCLLYGTKLV--FQERA 495
Query: 307 SVLGYKFLTPLFTTKLRIHDTC 328
L +K+LTP+ +T++R + C
Sbjct: 496 WYLEHKYLTPMASTRIRNQERC 517
>gi|157502163 acyl-Coenzyme A oxidase-like 2 [Homo sapiens]
Length = 547
Score = 29.3 bits (64), Expect = 6.7
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 256 AFSSLVEHRGKLNMVHIQNATLAG-GVAVGTCADMAIHP--------FGSMIIGSIAGMV 306
A++S + H L++ H TL +AV +C D +G+ ++
Sbjct: 468 AWNSCLHHVASLSLAHTHRVTLEQFSLAVKSCPDQEDQTLLMKFCLLYGTKLV--FQERA 525
Query: 307 SVLGYKFLTPLFTTKLRIHDTC 328
L +K+LTP+ +T++R + C
Sbjct: 526 WYLEHKYLTPMASTRIRNQERC 547
>gi|154146231 DMRT-like family A2 [Homo sapiens]
Length = 542
Score = 28.9 bits (63), Expect = 8.8
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 336 LPGVVGGLAGIVAVAMGASNTSMAM--QAAALGSSIGTAVVGGLMTG 380
LP V G A A G S+A AAA +S+ +V GGL+ G
Sbjct: 7 LPSVPGAATAAAATATGPPVASVASVAAAAAAAASLPVSVAGGLLRG 53
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.140 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,828,469
Number of Sequences: 37866
Number of extensions: 478583
Number of successful extensions: 1513
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1466
Number of HSP's gapped (non-prelim): 30
length of query: 409
length of database: 18,247,518
effective HSP length: 105
effective length of query: 304
effective length of database: 14,271,588
effective search space: 4338562752
effective search space used: 4338562752
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.