Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RHCG Sequence: fasta or formatted (479aa) NCBI GI: 7706683
Description:

Rh family, C glycoprotein

Referenced in:

Kidney
Hematopoiesis and Erythrocytes
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         37           2
 C cysteine            1.7          8           1
 D aspartate           3.3         16           1
 E glutamate           3.5         17           1
 F phenylalanine       7.5         36           2
 G glycine             8.8         42           2
 H histidine           2.5         12           1
 I isoleucine          6.3         30           2
 K lysine              2.3         11           2
 L leucine            11.1         53           3
 M methionine          4.0         19           2
 N asparagine          4.0         19           2
 P proline             4.2         20           1
 Q glutamine           3.8         18           1
 R arginine            3.1         15           2
 S serine              6.5         31           2
 T threonine           5.0         24           1
 V valine              8.8         42           2
 W tryptophan          2.3         11           2
 Y tyrosine            3.8         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rh family, C glycoprotein 
RHBG                  0.512   Rhesus blood group, B glycoprotein 
RHAG                  0.447   Rh-associated glycoprotein 
RHD                   0.203   Rh blood group D antigen isoform 1 
RHCE                  0.195   Rhesus blood group, CcEe antigens isoform 1 
RHD                   0.176   Rh blood group D antigen isoform 2 
RHCE                  0.167   Rhesus blood group, CcEe antigens isoform 2 
RHCE                  0.065   Rhesus blood group, CcEe antigens isoform 3 
RHCE                  0.064   Rhesus blood group, CcEe antigens isoform 4 
MLXIPL                0.008   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.008   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.008   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.008   Williams Beuren syndrome chromosome region 14 isofor...
SFTA2                 0.007   surfactant associated protein G precursor 
C9orf131              0.005   hypothetical protein LOC138724 isoform D 
C9orf131              0.005   hypothetical protein LOC138724 isoform C 
C9orf131              0.005   hypothetical protein LOC138724 isoform B 
C9orf131              0.005   hypothetical protein LOC138724 isoform A 
PER2                  0.005   period 2 
RBM12                 0.005   RNA binding motif protein 12 
RBM12                 0.005   RNA binding motif protein 12 
C13orf23              0.005   hypothetical protein LOC80209 isoform 2 
C13orf23              0.005   hypothetical protein LOC80209 isoform 1 
POLR2A                0.004   DNA-directed RNA polymerase II A 
ZNF341                0.004   zinc finger protein 341 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press