Guide to the Human Genome
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Name: RHCE Sequence: fasta or formatted (417aa) NCBI GI: 66346664
Description:

Rhesus blood group, CcEe antigens isoform 1

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [266aa] Rhesus blood group, CcEe antigens isoform 3
alt prot [267aa] Rhesus blood group, CcEe antigens isoform 4
alt prot [354aa] Rhesus blood group, CcEe antigens isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         39           2
 C cysteine            1.7          7           2
 D aspartate           2.2          9           2
 E glutamate           1.4          6           1
 F phenylalanine       5.5         23           2
 G glycine             7.4         31           2
 H histidine           3.1         13           2
 I isoleucine          5.8         24           1
 K lysine              3.1         13           1
 L leucine            16.1         67           3
 M methionine          3.6         15           1
 N asparagine          3.4         14           1
 P proline             3.8         16           2
 Q glutamine           2.6         11           1
 R arginine            3.1         13           2
 S serine              8.4         35           2
 T threonine           4.8         20           1
 V valine              9.6         40           2
 W tryptophan          2.2          9           1
 Y tyrosine            2.9         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rhesus blood group, CcEe antigens isoform 1 
RHD                   0.900   Rh blood group D antigen isoform 1 
RHCE                  0.739   Rhesus blood group, CcEe antigens isoform 2 
RHD                   0.683   Rh blood group D antigen isoform 2 
RHCE                  0.362   Rhesus blood group, CcEe antigens isoform 4 
RHCE                  0.361   Rhesus blood group, CcEe antigens isoform 3 
RHAG                  0.267   Rh-associated glycoprotein 
RHCG                  0.232   Rh family, C glycoprotein 
RHBG                  0.215   Rhesus blood group, B glycoprotein 
CYB561D1              0.007   cytochrome b-561 domain containing 1 isoform 3 [Hom...
CYB561D1              0.007   cytochrome b-561 domain containing 1 isoform 1 [Hom...
CYB561D1              0.007   cytochrome b-561 domain containing 1 isoform 2 [Homo...
GPR128                0.006   G protein-coupled receptor 128 
C9orf96               0.005   hypothetical protein LOC169436 
PCDH8                 0.005   protocadherin 8 isoform 2 precursor 
PCDH8                 0.005   protocadherin 8 isoform 1 precursor 
TMBIM1                0.005   transmembrane BAX inhibitor motif containing 1 [Homo...
CCDC71                0.005   coiled-coil domain containing 71 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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