Guide to the Human Genome
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Name: PRIC285 Sequence: fasta or formatted (2649aa) NCBI GI: 156105693
Description:

PPAR-alpha interacting complex protein 285 isoform 1

Referenced in:

RNases and RNA Stability
Zinc Finger Proteins

Other entries for this name:
alt prot [2080aa] PPAR-alpha interacting complex protein 285 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5        251           5
 C cysteine            2.5         67           2
 D aspartate           4.3        113           2
 E glutamate           7.0        186           3
 F phenylalanine       3.3         88           2
 G glycine             6.8        180           4
 H histidine           3.0         79           2
 I isoleucine          2.3         62           1
 K lysine              2.7         72           2
 L leucine            11.6        307           3
 M methionine          1.3         35           1
 N asparagine          1.5         41           1
 P proline             7.2        191           3
 Q glutamine           5.9        156           3
 R arginine            8.5        226           3
 S serine              5.9        156           3
 T threonine           4.6        122           3
 V valine              8.2        217           3
 W tryptophan          1.6         42           1
 Y tyrosine            2.2         58           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PPAR-alpha interacting complex protein 285 isoform ... 
PRIC285               0.780   PPAR-alpha interacting complex protein 285 isoform ...
HELZ                  0.086   helicase with zinc finger domain 
UPF1                  0.030   regulator of nonsense transcripts 1 
MOV10L1               0.021   MOV10-like 1 
DIS3L                 0.020   DIS3 mitotic control homolog (S. cerevisiae)-like i...
DIS3L                 0.020   DIS3 mitotic control homolog (S. cerevisiae)-like is...
DIS3                  0.018   DIS3 mitotic control isoform b 
DIS3                  0.018   DIS3 mitotic control isoform a 
MOV10                 0.017   Mov10, Moloney leukemia virus 10, homolog 
MOV10                 0.017   Mov10, Moloney leukemia virus 10, homolog 
IGHMBP2               0.017   immunoglobulin mu binding protein 2 
SETX                  0.016   senataxin 
DIS3L2                0.014   DIS3 mitotic control homolog (S. cerevisiae)-like 2...
DNA2                  0.012   DNA replication helicase 2 homolog 
ZNFX1                 0.010   zinc finger, NFX1-type containing 1 
AQR                   0.006   aquarius 
ZC3H7A                0.005   zinc finger CCCH-type containing 7A 
ZC3H7B                0.004   zinc finger CCCH-type containing 7B 
LOC100292655          0.002   PREDICTED: similar to armadillo repeat containing, ...
CLIC6                 0.002   chloride intracellular channel 6 
ZNF385C               0.002   PREDICTED: zinc finger protein 385C 
ZNF385C               0.002   PREDICTED: zinc finger protein 385C 
ZNF385C               0.002   PREDICTED: zinc finger protein 385C 
GAP43                 0.002   growth associated protein 43 isoform 1 
GAP43                 0.002   growth associated protein 43 isoform 2 
SMTN                  0.002   smoothelin isoform b 
SMTN                  0.002   smoothelin isoform c 
SMTN                  0.002   smoothelin isoform a 
NEB                   0.002   nebulin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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