Guide to the Human Genome
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Name: MOV10L1 Sequence: fasta or formatted (1211aa) NCBI GI: 14251207
Description:

MOV10-like 1

Referenced in:

RNases and RNA Stability
Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         67           2
 C cysteine            2.7         33           2
 D aspartate           4.8         58           2
 E glutamate           7.8         94           2
 F phenylalanine       3.8         46           2
 G glycine             6.5         79           2
 H histidine           1.9         23           1
 I isoleucine          5.5         66           3
 K lysine              5.8         70           2
 L leucine             9.7        118           4
 M methionine          2.0         24           1
 N asparagine          4.0         49           2
 P proline             5.5         66           2
 Q glutamine           3.4         41           1
 R arginine            5.7         69           2
 S serine              7.9         96           3
 T threonine           5.0         61           2
 V valine              8.5        103           3
 W tryptophan          1.2         14           1
 Y tyrosine            2.8         34           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MOV10-like 1 
MOV10                 0.165   Mov10, Moloney leukemia virus 10, homolog 
MOV10                 0.165   Mov10, Moloney leukemia virus 10, homolog 
CXorf48               0.089   hypothetical protein LOC54967 isoform 1 
CXorf48               0.089   hypothetical protein LOC54967 isoform 2 
LOC728470             0.084   PREDICTED: similar to hCG1736317 isoform 1 
LOC728470             0.076   PREDICTED: similar to hCG1736317 
LOC728470             0.076   PREDICTED: similar to hCG1736317 isoform 2 
LOC650024             0.071   PREDICTED: similar to chromosome X open reading fra...
LOC650024             0.071   PREDICTED: similar to chromosome X open reading fra...
HELZ                  0.070   helicase with zinc finger domain 
UPF1                  0.054   regulator of nonsense transcripts 1 
PRIC285               0.047   PPAR-alpha interacting complex protein 285 isoform ...
PRIC285               0.044   PPAR-alpha interacting complex protein 285 isoform ...
IGHMBP2               0.041   immunoglobulin mu binding protein 2 
DNA2                  0.036   DNA replication helicase 2 homolog 
SETX                  0.032   senataxin 
ZNFX1                 0.018   zinc finger, NFX1-type containing 1 
AQR                   0.011   aquarius 
DYNC1H1               0.005   cytoplasmic dynein 1 heavy chain 1 
MPP4                  0.003   membrane protein, palmitoylated 4 
RFC2                  0.003   replication factor C 2 isoform 1 
RFC4                  0.003   replication factor C 4 
RFC4                  0.003   replication factor C 4 
RFC5                  0.003   replication factor C 5 isoform 2 
RFC5                  0.003   replication factor C 5 isoform 2 
RFC5                  0.003   replication factor C 5 isoform 1 
RFC2                  0.003   replication factor C 2 isoform 2 
CCT3                  0.003   chaperonin containing TCP1, subunit 3 isoform b [Hom...
CCT3                  0.003   chaperonin containing TCP1, subunit 3 isoform c [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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