SNX21 5780

Name: SNX21	Sequence: fasta or formatted (373aa)		NCBI GI: 15553099
Description: sorting nexin 21 isoform a		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [152aa] sorting nexin 21 isoform c alt prot [158aa] sorting nexin 21 isoform d alt prot [199aa] sorting nexin 21 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.7 40 3 C cysteine 1.3 5 2 D aspartate 7.0 26 3 E glutamate 8.6 32 2 F phenylalanine 3.5 13 2 G glycine 6.7 25 1 H histidine 2.4 9 1 I isoleucine 1.3 5 1 K lysine 2.7 10 2 L leucine 14.7 55 2 M methionine 0.8 3 1 N asparagine 1.3 5 1 P proline 8.0 30 3 Q glutamine 6.4 24 1 R arginine 8.6 32 2 S serine 6.7 25 2 T threonine 4.0 15 1 V valine 2.7 10 2 W tryptophan 1.3 5 1 Y tyrosine 1.1 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 21 isoform a SNX21 0.515 sorting nexin 21 isoform b SNX21 0.382 sorting nexin 21 isoform d SNX21 0.374 sorting nexin 21 isoform c SNX20 0.183 sorting nexin 20 isoform 1 SNX15 0.033 sorting nexin 15 isoform B SNX15 0.033 sorting nexin 15 isoform A SGK3 0.032 serum/glucocorticoid regulated kinase 3 isoform 2 [H... SGK3 0.032 serum/glucocorticoid regulated kinase 3 isoform 1 [H... SGK3 0.032 serum/glucocorticoid regulated kinase 3 isoform 1 [H... ZBTB45 0.027 zinc finger and BTB domain containing 45 CHIC1 0.023 cysteine-rich hydrophobic domain 1 C1orf107 0.022 digestive-organ expansion factor homolog SNX13 0.022 sorting nexin 13 ITGAE 0.021 integrin, alpha E precursor RPS6KC1 0.021 ribosomal protein S6 kinase, 52kDa, polypeptide 1 is... LOC645490 0.021 PREDICTED: similar to hCG1991922 NCL 0.019 nucleolin LCP2 0.019 lymphocyte cytosolic protein 2 LOC645490 0.019 PREDICTED: similar to hCG1991922 CASZ1 0.019 castor homolog 1, zinc finger isoform a SNX16 0.019 sorting nexin 16 isoform a SNX16 0.019 sorting nexin 16 isoform a PGBD3 0.019 hypothetical protein LOC267004 UBTF 0.019 upstream binding transcription factor, RNA polymera... UBTF 0.019 upstream binding transcription factor, RNA polymera... UBTF 0.019 upstream binding transcription factor, RNA polymerase... C10orf140 0.019 hypothetical protein LOC387640 SUPT5H 0.018 suppressor of Ty 5 homolog isoform a SUPT5H 0.018 suppressor of Ty 5 homolog isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.