SNX21 15996

Name: SNX21	Sequence: fasta or formatted (199aa)		NCBI GI: 23510350
Description: sorting nexin 21 isoform b		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [152aa] sorting nexin 21 isoform c alt prot [158aa] sorting nexin 21 isoform d alt prot [373aa] sorting nexin 21 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 19 3 C cysteine 0.5 1 1 D aspartate 9.5 19 3 E glutamate 9.0 18 2 F phenylalanine 3.5 7 1 G glycine 8.0 16 1 H histidine 2.5 5 1 I isoleucine 1.5 3 1 K lysine 2.0 4 2 L leucine 10.1 20 2 M methionine 1.5 3 1 N asparagine 1.5 3 1 P proline 8.5 17 3 Q glutamine 6.5 13 1 R arginine 7.5 15 2 S serine 9.5 19 2 T threonine 3.5 7 1 V valine 2.5 5 2 W tryptophan 1.0 2 1 Y tyrosine 1.5 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 21 isoform b SNX21 0.982 sorting nexin 21 isoform a SNX21 0.728 sorting nexin 21 isoform d SNX21 0.712 sorting nexin 21 isoform c SNX20 0.115 sorting nexin 20 isoform 1 ZBTB45 0.052 zinc finger and BTB domain containing 45 CHIC1 0.045 cysteine-rich hydrophobic domain 1 C1orf107 0.042 digestive-organ expansion factor homolog ITGAE 0.039 integrin, alpha E precursor LOC645490 0.039 PREDICTED: similar to hCG1991922 NCL 0.037 nucleolin LCP2 0.037 lymphocyte cytosolic protein 2 LOC645490 0.037 PREDICTED: similar to hCG1991922 CASZ1 0.037 castor homolog 1, zinc finger isoform a PGBD3 0.037 hypothetical protein LOC267004 UBTF 0.037 upstream binding transcription factor, RNA polymera... UBTF 0.037 upstream binding transcription factor, RNA polymera... UBTF 0.037 upstream binding transcription factor, RNA polymerase... C10orf140 0.037 hypothetical protein LOC387640 SUPT5H 0.034 suppressor of Ty 5 homolog isoform a SUPT5H 0.034 suppressor of Ty 5 homolog isoform a SUPT5H 0.034 suppressor of Ty 5 homolog isoform a NKX1-1 0.031 PREDICTED: NK1 homeobox 1 NKX1-1 0.031 PREDICTED: HPX-153 homeobox SRCAP 0.031 Snf2-related CBP activator protein LOC645490 0.031 PREDICTED: similar to hCG1991922 MYT1 0.031 myelin transcription factor 1 PELP1 0.031 proline, glutamic acid and leucine rich protein 1 [... RP1L1 0.031 retinitis pigmentosa 1-like 1 ARID3A 0.029 AT rich interactive domain 3A (BRIGHT- like) protein ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.