ITGAE 4669

Name: ITGAE	Sequence: fasta or formatted (1179aa)		NCBI GI: 148728188
Description: integrin, alpha E precursor		Referenced in: Integrins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 89 5 C cysteine 2.2 26 1 D aspartate 5.1 60 2 E glutamate 7.0 83 5 F phenylalanine 4.4 52 2 G glycine 7.3 86 3 H histidine 2.9 34 2 I isoleucine 4.4 52 3 K lysine 3.9 46 2 L leucine 10.8 127 3 M methionine 1.9 22 2 N asparagine 3.7 44 1 P proline 4.0 47 2 Q glutamine 4.7 56 2 R arginine 5.3 62 3 S serine 8.1 96 2 T threonine 5.4 64 2 V valine 7.9 93 2 W tryptophan 0.8 10 1 Y tyrosine 2.5 30 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 integrin, alpha E precursor ITGAM 0.168 integrin alpha M isoform 2 precursor ITGAM 0.168 integrin alpha M isoform 1 precursor ITGAD 0.163 integrin, alpha D precursor ITGAX 0.154 integrin alpha X precursor ITGAL 0.135 integrin alpha L isoform a precursor ITGAL 0.126 integrin alpha L isoform b precursor ITGA11 0.124 integrin, alpha 11 precursor ITGA10 0.122 integrin, alpha 10 precursor ITGA2 0.118 integrin alpha 2 precursor ITGA1 0.115 integrin, alpha 1 precursor ITGA9 0.078 integrin, alpha 9 precursor ITGA4 0.070 integrin alpha 4 precursor ITGA3 0.062 integrin alpha 3 isoform a precursor ITGA3 0.062 integrin alpha 3 isoform b precursor ITGAV 0.058 integrin alpha-V isoform 2 ITGAV 0.058 integrin alpha-V isoform 1 precursor ITGA7 0.054 integrin alpha 7 isoform 2 precursor ITGA6 0.053 integrin alpha chain, alpha 6 isoform a precursor [... ITGA6 0.053 integrin alpha chain, alpha 6 isoform b precursor [... ITGAV 0.052 integrin alpha-V isoform 3 precursor ITGA7 0.052 integrin alpha 7 isoform 3 ITGA7 0.052 integrin alpha 7 isoform 1 precursor ITGA5 0.051 integrin alpha 5 precursor ITGA8 0.050 integrin, alpha 8 ITGA2B 0.045 integrin alpha 2b preproprotein COL12A1 0.030 collagen, type XII, alpha 1 short isoform precursor ... COL12A1 0.030 collagen, type XII, alpha 1 long isoform precursor [... COL20A1 0.026 collagen, type XX, alpha 1 MATN1 0.025 matrilin 1, cartilage matrix protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.