SPTBN4 1524

Name: SPTBN4	Sequence: fasta or formatted (678aa)		NCBI GI: 115430239
Description: spectrin, beta, non-erythrocytic 4 isoform sigma5		Referenced in: Spectrin and Plectin Families
Other entries for this name: alt prot [2564aa] spectrin, beta, non-erythrocytic 4 isoform sigma1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 75 3 C cysteine 0.7 5 1 D aspartate 3.8 26 2 E glutamate 12.5 85 2 F phenylalanine 1.9 13 2 G glycine 5.0 34 2 H histidine 2.7 18 1 I isoleucine 1.8 12 1 K lysine 4.3 29 2 L leucine 13.7 93 3 M methionine 2.5 17 2 N asparagine 1.3 9 1 P proline 3.5 24 2 Q glutamine 9.3 63 2 R arginine 8.0 54 3 S serine 6.5 44 2 T threonine 2.8 19 2 V valine 5.2 35 2 W tryptophan 2.2 15 2 Y tyrosine 1.2 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spectrin, beta, non-erythrocytic 4 isoform sigma5 [... SPTBN4 0.950 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... SPTBN1 0.496 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.496 spectrin, beta, non-erythrocytic 1 isoform 1 SPTB 0.423 spectrin beta isoform a SPTB 0.423 spectrin beta isoform b SPTBN2 0.388 spectrin, beta, non-erythrocytic 2 SPTBN5 0.187 spectrin, beta, non-erythrocytic 5 SPTAN1 0.136 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.136 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTA1 0.123 spectrin, alpha, erythrocytic 1 DST 0.055 dystonin isoform 4 DST 0.055 dystonin isoform 3 DST 0.055 dystonin isoform 2 DST 0.055 dystonin isoform 1 DST 0.055 dystonin isoform 1eA precursor MACF1 0.045 microfilament and actin filament cross-linker protei... MACF1 0.045 microfilament and actin filament cross-linker protei... SYNE1 0.041 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.041 spectrin repeat containing, nuclear envelope 1 isof... MYH1 0.040 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH3 0.038 myosin, heavy chain 3, skeletal muscle, embryonic [H... MYH4 0.038 myosin, heavy polypeptide 4, skeletal muscle MYH2 0.038 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.038 myosin, heavy chain 2, skeletal muscle, adult [Homo... PLEC1 0.034 plectin 1 isoform 11 PLEC1 0.034 plectin 1 isoform 10 PLEC1 0.034 plectin 1 isoform 8 PLEC1 0.034 plectin 1 isoform 7 PLEC1 0.034 plectin 1 isoform 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.