Guide to the Human Genome
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Name: KRTAP4-12 Sequence: fasta or formatted (201aa) NCBI GI: 13994129
Description:

keratin associated protein 4-12

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.5          1           1
 C cysteine           36.8         74           3
 D aspartate           0.5          1           1
 E glutamate           1.0          2           1
 F phenylalanine       0.0          0           0
 G glycine             2.0          4           1
 H histidine           0.5          1           1
 I isoleucine          1.0          2           1
 K lysine              0.0          0           0
 L leucine             1.5          3           1
 M methionine          0.5          1           1
 N asparagine          1.0          2           1
 P proline             9.5         19           1
 Q glutamine           6.5         13           1
 R arginine            9.0         18           1
 S serine             14.4         29           3
 T threonine           9.5         19           2
 V valine              5.5         11           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 4-12 
KRTAP4-9              0.892   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.888   keratin associated protein 4-9 
KRTAP4-11             0.815   keratin associated protein 4-11 
KRTAP4-8              0.811   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.811   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.801   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.801   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.795   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.774   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.774   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.772   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-5              0.724   keratin associated protein 4-5 
KRTAP4-8              0.712   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.712   keratin associated protein 4.8 
KRTAP4-3              0.631   keratin associated protein 4-3 
KRTAP4-4              0.618   keratin associated protein 4.4 
KRTAP4-2              0.608   keratin associated protein 4-2 
KRTAP4-7              0.598   keratin associated protein 4-7 
KRTAP4-7              0.598   PREDICTED: keratin associated protein 4-7 
LOC728318             0.429   PREDICTED: hypothetical protein 
LOC728318             0.429   PREDICTED: hypothetical protein 
LOC728318             0.427   PREDICTED: hypothetical protein 
KRTAP4-1              0.411   keratin associated protein 4-1 
KRTAP10-11            0.407   keratin associated protein 10-11 
KRTAP9-2              0.400   keratin associated protein 9.2 
KRTAP10-2             0.388   keratin associated protein 10-2 
KRTAP10-6             0.386   keratin associated protein 10-6 
LOC100131696          0.384   PREDICTED: keratin associated protein 
LOC100131696          0.384   PREDICTED: keratin associated protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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