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Search of human proteins with 14916427
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14916427 naked cuticle homolog 2 [Homo sapiens]
(451 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14916427 naked cuticle homolog 2 [Homo sapiens] 948 0.0
gi|14916433 naked cuticle homolog 1 [Homo sapiens] 311 8e-85
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 51 2e-06
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 51 2e-06
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 51 2e-06
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 49 7e-06
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 49 7e-06
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 49 7e-06
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 49 7e-06
gi|56550035 colon carcinoma related protein [Homo sapiens] 49 1e-05
gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 48 2e-05
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 48 2e-05
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 48 2e-05
gi|32307177 forkhead box G1 [Homo sapiens] 47 3e-05
gi|24307887 one cut homeobox 1 [Homo sapiens] 47 3e-05
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 47 5e-05
gi|61966923 forkhead box B2 [Homo sapiens] 46 6e-05
gi|84105335 mesenchyme homeobox 2 [Homo sapiens] 46 8e-05
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 46 8e-05
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 46 8e-05
gi|55741677 SET domain containing 1A [Homo sapiens] 45 1e-04
gi|27894361 nuclear receptor subfamily 4, group A, member 3 isof... 45 1e-04
gi|27894359 nuclear receptor subfamily 4, group A, member 3 isof... 45 1e-04
gi|27894357 nuclear receptor subfamily 4, group A, member 3 isof... 45 1e-04
gi|27894355 nuclear receptor subfamily 4, group A, member 3 isof... 45 1e-04
gi|18765752 dual-specificity tyrosine-(Y)-phosphorylation regula... 45 1e-04
gi|18765758 dual-specificity tyrosine-(Y)-phosphorylation regula... 45 1e-04
gi|169216868 PREDICTED: similar to testis expressed sequence 13A... 45 2e-04
gi|55770830 chromobox homolog 4 [Homo sapiens] 44 2e-04
gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens] 44 2e-04
>gi|14916427 naked cuticle homolog 2 [Homo sapiens]
Length = 451
Score = 948 bits (2451), Expect = 0.0
Identities = 451/451 (100%), Positives = 451/451 (100%)
Query: 1 MGKLQSKHAAAARKRRESPEGDSFVASAYASGRKGAEEAERRARDKQELPNGDPKEGPFR 60
MGKLQSKHAAAARKRRESPEGDSFVASAYASGRKGAEEAERRARDKQELPNGDPKEGPFR
Sbjct: 1 MGKLQSKHAAAARKRRESPEGDSFVASAYASGRKGAEEAERRARDKQELPNGDPKEGPFR 60
Query: 61 EDQCPLQVALPAEKAEGREHPGQLLSADDGERAANREGPRGPGGQRLNIDALQCDVSVEE 120
EDQCPLQVALPAEKAEGREHPGQLLSADDGERAANREGPRGPGGQRLNIDALQCDVSVEE
Sbjct: 61 EDQCPLQVALPAEKAEGREHPGQLLSADDGERAANREGPRGPGGQRLNIDALQCDVSVEE 120
Query: 121 DDRQEWTFTLYDFDNCGKVTREDMSSLMHTIYEVVDASVNHSSGSSKTLRVKLTVSPEPS 180
DDRQEWTFTLYDFDNCGKVTREDMSSLMHTIYEVVDASVNHSSGSSKTLRVKLTVSPEPS
Sbjct: 121 DDRQEWTFTLYDFDNCGKVTREDMSSLMHTIYEVVDASVNHSSGSSKTLRVKLTVSPEPS 180
Query: 181 SKRKEGPPAGQDREPTRCRMEGELAEEPRVADRRLSAHVRRPSTDPQPCSERGPYCVDEN 240
SKRKEGPPAGQDREPTRCRMEGELAEEPRVADRRLSAHVRRPSTDPQPCSERGPYCVDEN
Sbjct: 181 SKRKEGPPAGQDREPTRCRMEGELAEEPRVADRRLSAHVRRPSTDPQPCSERGPYCVDEN 240
Query: 241 TERRNHYLDLAGIENYTSRFGPGSPPVQAKQEPQGRASHLQARSRSQEPDTHAVHHRRSQ 300
TERRNHYLDLAGIENYTSRFGPGSPPVQAKQEPQGRASHLQARSRSQEPDTHAVHHRRSQ
Sbjct: 241 TERRNHYLDLAGIENYTSRFGPGSPPVQAKQEPQGRASHLQARSRSQEPDTHAVHHRRSQ 300
Query: 301 VLVEHVVPASEPAARALDTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSGKAFSYYLPAV 360
VLVEHVVPASEPAARALDTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSGKAFSYYLPAV
Sbjct: 301 VLVEHVVPASEPAARALDTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSGKAFSYYLPAV 360
Query: 361 LPPQAPQDGHHLPQPPPPPYGHKRYRQKGREGHSPLKAPHAQPATVEHEVVRDLPPTPAG 420
LPPQAPQDGHHLPQPPPPPYGHKRYRQKGREGHSPLKAPHAQPATVEHEVVRDLPPTPAG
Sbjct: 361 LPPQAPQDGHHLPQPPPPPYGHKRYRQKGREGHSPLKAPHAQPATVEHEVVRDLPPTPAG 420
Query: 421 EGYAVPVIQRHEHHHHHEHHHHHHHHHFHPS 451
EGYAVPVIQRHEHHHHHEHHHHHHHHHFHPS
Sbjct: 421 EGYAVPVIQRHEHHHHHEHHHHHHHHHFHPS 451
>gi|14916433 naked cuticle homolog 1 [Homo sapiens]
Length = 470
Score = 311 bits (797), Expect = 8e-85
Identities = 208/482 (43%), Positives = 263/482 (54%), Gaps = 49/482 (10%)
Query: 1 MGKLQSKHAAAARKRRESPEGDSFVASAYASGRKGAEE-------------------AER 41
MGKL SK AA KRRESPEGDSF SA A RKG EE A
Sbjct: 1 MGKLHSKPAAVC-KRRESPEGDSFAVSA-AWARKGIEEWIGRQRCPGGVSGPRQLRLAGT 58
Query: 42 RARDKQELPNGDPKE--GPFREDQCPLQVALPAEKAEGREHPGQLLSADDGERAANREGP 99
R +EL ++ ED L+VALP EK +G L + D ++ P
Sbjct: 59 IGRSTRELVGDVLRDTLSEEEEDDFRLEVALPPEKTDG-------LGSGDEKKMERVSEP 111
Query: 100 RGPGGQRLNIDALQCDVSVEEDDRQEWTFTLYDFDNCGKVTREDMSSLMHTIYEVVDASV 159
++L + LQCDVS+EED RQEWTFTLYDFDN GKVTRED++SL+HTIYEVVD+SV
Sbjct: 112 CPGSKKQLKFEELQCDVSMEEDSRQEWTFTLYDFDNNGKVTREDITSLLHTIYEVVDSSV 171
Query: 160 NHSSGSSKTLRVKLTVSPEPSSKRKEGPPAGQDREPTRCRMEGELAEEPRVADRRLSAHV 219
NHS SSK LRVKLTV+P+ S ++ D + R R E + E+ R +++ A +
Sbjct: 172 NHSPTSSKMLRVKLTVAPDGSQSKRSVLVNQADLQSARPRAETKPTEDLRSWEKKQRAPL 231
Query: 220 RRPSTDPQPCSERGPYCVDENTERRNHYLDLAGIENYTSRFGPGSPPVQAKQEPQGRASH 279
R S +CVDEN ERRNHYLDLAGIENYTS+FGPGSP V K E R S+
Sbjct: 232 RFQGDSRLEQSGCYHHCVDENIERRNHYLDLAGIENYTSQFGPGSPSVAQKSELPPRTSN 291
Query: 280 LQARSRSQEPDTHAVHHRRSQVLVEHVVPAS-----EPAARALDTQPRPKGPE---KQFL 331
RSRS EP+ + HR+ Q V PAS P A+ + Q R +G + K F+
Sbjct: 292 -PTRSRSHEPEAIHIPHRKPQ----GVDPASFHFLDTPIAKVSELQQRLRGTQDGSKHFV 346
Query: 332 KSPKGSGKPPGVPASSKSGKAFSYYLPAV--LPPQAPQDGHHLPQPPPPPYGHKRYRQKG 389
+SPK GK GV ++ + PA+ + P A P P GHK+++ +
Sbjct: 347 RSPKAQGKSVGVGHVARGARNKPPLGPAIPAVSPSAHLAASPALLPSLAPLGHKKHKHRA 406
Query: 390 RE---GHSPLKAPHAQPATV-EHEVVRDLPPTPAGEGYAVPVIQRHEHHHHHEHHHHHHH 445
+E G L+AP A V E +R+LP E A +QRHEHHHHHEHHHH+HH
Sbjct: 407 KESQQGCRGLQAPLASGGPVLGREHLRELPALVVYESQAGQPVQRHEHHHHHEHHHHYHH 466
Query: 446 HH 447
+
Sbjct: 467 FY 468
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 50.8 bits (120), Expect = 2e-06
Identities = 37/115 (32%), Positives = 46/115 (40%), Gaps = 14/115 (12%)
Query: 336 GSGKPPGVPASSKSGKAFSYYLPAVLPPQAPQDGHHLPQPPPPPYGHKRYRQKGREGHSP 395
GS P A++ +G A + PA G +P P P R G HS
Sbjct: 572 GSTPPADSVAAAGAGAAAAGSGPA---------GSRVPAPHHPHLLEGRKAGGGSYHHSS 622
Query: 396 LKAPHAQPATVEHEVVRDLPPTPAGEGYAVPVIQRHEHHHHHEHHHHHHHHHFHP 450
P + E + L AG ++ Q H HHHHH HHHHHHHH P
Sbjct: 623 AFRPVG--GKDDAESLAKLHGASAGAPHSA---QTHPHHHHHPHHHHHHHHPPQP 672
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 50.8 bits (120), Expect = 2e-06
Identities = 37/115 (32%), Positives = 46/115 (40%), Gaps = 14/115 (12%)
Query: 336 GSGKPPGVPASSKSGKAFSYYLPAVLPPQAPQDGHHLPQPPPPPYGHKRYRQKGREGHSP 395
GS P A++ +G A + PA G +P P P R G HS
Sbjct: 572 GSTPPADSVAAAGAGAAAAGSGPA---------GSRVPAPHHPHLLEGRKAGGGSYHHSS 622
Query: 396 LKAPHAQPATVEHEVVRDLPPTPAGEGYAVPVIQRHEHHHHHEHHHHHHHHHFHP 450
P + E + L AG ++ Q H HHHHH HHHHHHHH P
Sbjct: 623 AFRPVG--GKDDAESLAKLHGASAGAPHSA---QTHPHHHHHPHHHHHHHHPPQP 672
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 50.8 bits (120), Expect = 2e-06
Identities = 37/115 (32%), Positives = 46/115 (40%), Gaps = 14/115 (12%)
Query: 336 GSGKPPGVPASSKSGKAFSYYLPAVLPPQAPQDGHHLPQPPPPPYGHKRYRQKGREGHSP 395
GS P A++ +G A + PA G +P P P R G HS
Sbjct: 572 GSTPPADSVAAAGAGAAAAGSGPA---------GSRVPAPHHPHLLEGRKAGGGSYHHSS 622
Query: 396 LKAPHAQPATVEHEVVRDLPPTPAGEGYAVPVIQRHEHHHHHEHHHHHHHHHFHP 450
P + E + L AG ++ Q H HHHHH HHHHHHHH P
Sbjct: 623 AFRPVG--GKDDAESLAKLHGASAGAPHSA---QTHPHHHHHPHHHHHHHHPPQP 672
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 49.3 bits (116), Expect = 7e-06
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 386 RQKGREGHSPLKAPHAQPATVEHEVVRDLPPTPAGEGYAVPVIQRHE----HHHHHEHHH 441
+ K H P +P AT + + +P T A +VP+ HHHHH HHH
Sbjct: 122 QSKSHHHHPPHHSPFKPDAT--YHTMNTIPCTSAASSSSVPISHPSALAGTHHHHHHHHH 179
Query: 442 HHHHHH 447
HHH H
Sbjct: 180 HHHQPH 185
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 49.3 bits (116), Expect = 7e-06
Identities = 18/30 (60%), Positives = 19/30 (63%)
Query: 420 GEGYAVPVIQRHEHHHHHEHHHHHHHHHFH 449
GE A P Q+H HHHH HHHHH HH H
Sbjct: 15 GEAPAAPPHQQHHHHHHAHHHHHHAHHLHH 44
Score = 28.9 bits (63), Expect = 10.0
Identities = 36/146 (24%), Positives = 47/146 (32%), Gaps = 35/146 (23%)
Query: 256 YTSRFGPGSP-----------------PVQAKQEPQGRASHLQAR------SRSQEPDTH 292
Y +R GPG P P Q SH+ R S S +P T
Sbjct: 1417 YQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITR 1476
Query: 293 AVH--HRRSQVLVEHVVPASEPAARALDTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSG 350
++ L H+ A PA+ + R + FL S K P VP S +G
Sbjct: 1477 PPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTG 1536
Query: 351 KAFSYYLPAVLPPQAPQDGHHLPQPP 376
PPQ P + PP
Sbjct: 1537 P----------PPQPPPIRREITFPP 1552
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 49.3 bits (116), Expect = 7e-06
Identities = 18/30 (60%), Positives = 19/30 (63%)
Query: 420 GEGYAVPVIQRHEHHHHHEHHHHHHHHHFH 449
GE A P Q+H HHHH HHHHH HH H
Sbjct: 15 GEAPAAPPHQQHHHHHHAHHHHHHAHHLHH 44
Score = 28.9 bits (63), Expect = 10.0
Identities = 36/146 (24%), Positives = 47/146 (32%), Gaps = 35/146 (23%)
Query: 256 YTSRFGPGSP-----------------PVQAKQEPQGRASHLQAR------SRSQEPDTH 292
Y +R GPG P P Q SH+ R S S +P T
Sbjct: 1457 YQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITR 1516
Query: 293 AVH--HRRSQVLVEHVVPASEPAARALDTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSG 350
++ L H+ A PA+ + R + FL S K P VP S +G
Sbjct: 1517 PPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTG 1576
Query: 351 KAFSYYLPAVLPPQAPQDGHHLPQPP 376
PPQ P + PP
Sbjct: 1577 P----------PPQPPPIRREITFPP 1592
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 49.3 bits (116), Expect = 7e-06
Identities = 18/30 (60%), Positives = 19/30 (63%)
Query: 420 GEGYAVPVIQRHEHHHHHEHHHHHHHHHFH 449
GE A P Q+H HHHH HHHHH HH H
Sbjct: 15 GEAPAAPPHQQHHHHHHAHHHHHHAHHLHH 44
Score = 28.9 bits (63), Expect = 10.0
Identities = 36/146 (24%), Positives = 47/146 (32%), Gaps = 35/146 (23%)
Query: 256 YTSRFGPGSP-----------------PVQAKQEPQGRASHLQAR------SRSQEPDTH 292
Y +R GPG P P Q SH+ R S S +P T
Sbjct: 1404 YQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITR 1463
Query: 293 AVH--HRRSQVLVEHVVPASEPAARALDTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSG 350
++ L H+ A PA+ + R + FL S K P VP S +G
Sbjct: 1464 PPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTG 1523
Query: 351 KAFSYYLPAVLPPQAPQDGHHLPQPP 376
PPQ P + PP
Sbjct: 1524 P----------PPQPPPIRREITFPP 1539
>gi|56550035 colon carcinoma related protein [Homo sapiens]
Length = 326
Score = 48.5 bits (114), Expect = 1e-05
Identities = 31/95 (32%), Positives = 35/95 (36%), Gaps = 19/95 (20%)
Query: 374 QPPPPPY---GHKRYRQKGREGHSPLKAPHAQPATVEHEVVRDLPPTPAGEGYAVP---- 426
QPPP P H ++ G G P P H+ PP E + P
Sbjct: 156 QPPPAPCLGGVHPDFQVTGPPGTFSAADPSPWPGHNLHQT-GPAPPPAVSESWPYPLTSQ 214
Query: 427 ----------VIQRHEHHHHHEHHHH-HHHHHFHP 450
V RH H H H HH H HHHHH HP
Sbjct: 215 VSPSYSHMHDVYMRHHHPHAHMHHRHRHHHHHHHP 249
>gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
A [Homo sapiens]
Length = 353
Score = 47.8 bits (112), Expect = 2e-05
Identities = 26/67 (38%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 389 GREGHSPLKAPHAQPATVEHEVVRDLPPTPAGEGYAVPVIQRHEH------HHHHEHHHH 442
G H H A +E R P AG G A + H H HHHH HHH
Sbjct: 144 GSGHHGAHHGAHHPAAAAAYEAFRG--PGFAGGGGADDMGAGHHHGAHHAAHHHHAAHHH 201
Query: 443 HHHHHFH 449
HHHHH H
Sbjct: 202 HHHHHHH 208
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 47.8 bits (112), Expect = 2e-05
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 365 APQDGHHLPQPPPPPYGHKRYRQKGREGHSPLKAPHAQPATVEHEVVRDLPPTPAGEGYA 424
+P+ +P PPPPP + Q+ S + + + +PP P G+ A
Sbjct: 1173 SPRPHQRMPPPPPPPPPEEYKSQRPVSNSSSFLG--SLFGSKRGKGPFQMPPPPTGQASA 1230
Query: 425 VPVIQRHEHHHHHEHHHHHHH 445
HHHHH HHH H H
Sbjct: 1231 SSSSASSTHHHHHHHHHGHSH 1251
Score = 32.3 bits (72), Expect = 0.90
Identities = 66/275 (24%), Positives = 84/275 (30%), Gaps = 75/275 (27%)
Query: 200 MEGELAEEPRVADRRLSAHVRRPSTDPQPCSERGPYCVDENTERRNHYLDLAGIENYTSR 259
+EG + PR H R P P P E Y + +L S
Sbjct: 1166 IEGSVISSPR-------PHQRMPPPPPPPPPEE--YKSQRPVSNSSSFLG--------SL 1208
Query: 260 FGP--GSPPVQAKQEPQGRASHLQARSRSQEPDTHAVHHRRSQVLVEHVVPASEPAARAL 317
FG G P Q P G+AS + + S H HH S + V+P + +AL
Sbjct: 1209 FGSKRGKGPFQMPPPPTGQASASSSSASSTHHHHHHHHHGHSHGGLG-VLPDGQSKLQAL 1267
Query: 318 DTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSGKAFSYYLPAVLPPQ------APQDGHH 371
Q +G G P P LPPQ PQ
Sbjct: 1268 HAQ------------YCQGPGPAP----------------PPYLPPQQPSLPPPPQQPPP 1299
Query: 372 LPQ----PPPP-------PYGH---------KRYRQKGREGHSPLKAPHAQPATVEHEVV 411
LPQ PPPP P+ H ++ GR G +P + P H
Sbjct: 1300 LPQLGSIPPPPASAPPVGPHRHFHAHGPVPGPQHYTLGRPGRAPRRGAGGHPQFAPHGRH 1359
Query: 412 RDLPPTPAGEGYAVPVIQRHEHHHHHEHHHHHHHH 446
PT Y+ P Q H H HH
Sbjct: 1360 PLHQPTSPLPLYS-PAPQHPPAHKQGPKHFIFSHH 1393
Score = 32.0 bits (71), Expect = 1.2
Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
Query: 334 PKGSGKPPGVPASSKSGKAFSYYLPAVLPPQAPQDGHHLPQPPPPPYGHKRYRQKGREGH 393
P S P PA + K F + + P A G +PP Y H + Q H
Sbjct: 1369 PLYSPAPQHPPAHKQGPKHFIFSHHPQMMPAAGAAGGPGSRPPGGSYSHPHHPQSPLSPH 1428
Query: 394 SPLKAPHAQ----PATVEHEVVRDLPPT 417
SP+ PH P H LPPT
Sbjct: 1429 SPI-PPHPSYPPLPPPSPHTPHSPLPPT 1455
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 47.8 bits (112), Expect = 2e-05
Identities = 14/15 (93%), Positives = 14/15 (93%)
Query: 433 HHHHHEHHHHHHHHH 447
HHHHH HHHHHHHHH
Sbjct: 337 HHHHHHHHHHHHHHH 351
Score = 46.6 bits (109), Expect = 5e-05
Identities = 14/18 (77%), Positives = 14/18 (77%)
Query: 433 HHHHHEHHHHHHHHHFHP 450
HHHHH HHHHHHHH P
Sbjct: 338 HHHHHHHHHHHHHHRAQP 355
Score = 44.7 bits (104), Expect = 2e-04
Identities = 13/15 (86%), Positives = 13/15 (86%)
Query: 431 HEHHHHHEHHHHHHH 445
H HHHHH HHHHHHH
Sbjct: 337 HHHHHHHHHHHHHHH 351
Score = 44.3 bits (103), Expect = 2e-04
Identities = 13/15 (86%), Positives = 13/15 (86%)
Query: 435 HHHEHHHHHHHHHFH 449
HHH HHHHHHHHH H
Sbjct: 337 HHHHHHHHHHHHHHH 351
Score = 42.0 bits (97), Expect = 0.001
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 10/36 (27%)
Query: 422 GYAVPVIQRHEHHHHHEHHHH--------HH--HHH 447
G+ P H HHHHH HHHH HH HHH
Sbjct: 331 GFCPPPHHHHHHHHHHHHHHHRAQPPQQSHHPPHHH 366
Score = 41.6 bits (96), Expect = 0.001
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 10/35 (28%)
Query: 426 PVIQRHEHHHHHEHHHHH--------HH--HHFHP 450
P H HHHHH HHHHH HH HH P
Sbjct: 334 PPPHHHHHHHHHHHHHHHRAQPPQQSHHPPHHHRP 368
>gi|32307177 forkhead box G1 [Homo sapiens]
Length = 489
Score = 47.4 bits (111), Expect = 3e-05
Identities = 16/22 (72%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
Query: 431 HEHH--HHHEHHHHHHHHHFHP 450
H HH HH +HHHHHHHHH HP
Sbjct: 37 HGHHNSHHPQHHHHHHHHHHHP 58
Score = 42.0 bits (97), Expect = 0.001
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 431 HEHHHHHEHHHHHHHHHFHP 450
H HH HHHHHHHHH P
Sbjct: 40 HNSHHPQHHHHHHHHHHHPP 59
Score = 41.6 bits (96), Expect = 0.001
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 431 HEHHHHHEHHHHHHHHHFHP 450
+ HH H HHHHHHHHH P
Sbjct: 41 NSHHPQHHHHHHHHHHHPPP 60
Score = 31.6 bits (70), Expect = 1.5
Identities = 33/122 (27%), Positives = 40/122 (32%), Gaps = 25/122 (20%)
Query: 258 SRFGPGSPPVQAKQEPQGRASHLQARSRSQEPDTHAVHHRRSQVLVEHVVPASEPAARAL 317
S F S +A Q ASH S P H HH H P P
Sbjct: 16 SSFSINSLVPEAVQNDNHHASH--GHHNSHHPQHHHHHHHH-----HHHPPPPAP----- 63
Query: 318 DTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSGKAFSYYLPAVLPPQAPQDGHHLPQPPP 377
QP P ++Q P + +PP + PA + PQ P PPP
Sbjct: 64 --QPPPPPQQQQPPPPPPPAPQPPQTRGA-----------PAADDDKGPQQLLLPPPPPP 110
Query: 378 PP 379
PP
Sbjct: 111 PP 112
>gi|24307887 one cut homeobox 1 [Homo sapiens]
Length = 465
Score = 47.4 bits (111), Expect = 3e-05
Identities = 30/97 (30%), Positives = 33/97 (34%), Gaps = 18/97 (18%)
Query: 369 GHHLPQPPPPPYGHKRYRQKGREG---HSPLKAPHAQPATVEHEVVRDLPPTPAGEGYAV 425
G HLP P G G G H +AP A H + TP G
Sbjct: 42 GSHLPPAHPRSMGMASLLDGGSGGGDYHHHHRAPEHSLAGPLHPTMTMACETPPGMSMPT 101
Query: 426 P---------------VIQRHEHHHHHEHHHHHHHHH 447
V + HHHHH HHHHH HHH
Sbjct: 102 TYTTLTPLQPLPPISTVSDKFPHHHHHHHHHHHPHHH 138
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 46.6 bits (109), Expect = 5e-05
Identities = 43/177 (24%), Positives = 67/177 (37%), Gaps = 21/177 (11%)
Query: 280 LQARSRSQEPDTHAVHHRRSQVLVEHVVPASEPAARALDTQPRPKGPEKQFLKSPKGSGK 339
L+ RS P + + V + +P ++P +P P ++ ++
Sbjct: 477 LEQRSPPPPPPPPTLLNSSHPVPTQSPLPFTQPGPAFNQQGQQPVFPRERPVRPALQPPG 536
Query: 340 PPGVPASSKSGKAFSYYLPAVLPPQAPQDGHHLPQPPPPPYGHKRYRQKGREG--HSPLK 397
P G+ S+ G A + +PP+ P LP P P + Q +G H PL
Sbjct: 537 PVGILHFSQPGSATTR---PFIPPRQP----FLPGPGQPFL--PTHTQPNLQGPLHPPLP 587
Query: 398 APHA-------QPATVEHEVVRDLPPTPAGEGYAVPVIQRHEHHHHHEHHHHHHHHH 447
PH Q +H+ P P + P +H H +H HHHHHHH
Sbjct: 588 PPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPPP---QHPPQHPPQHQHHHHHHH 641
Score = 34.7 bits (78), Expect = 0.18
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 244 RNHYLDLAGIENYTSRFGPGSPPVQAKQEPQGRASHL-QARS--RSQEPDTHAVHHRRSQ 300
+N + ++ ++ TS F P S +Q + + HL Q R+ +SQ H V +
Sbjct: 877 KNQDVSISNVQPKTSNFVPSSANMQYQGQQMKALKHLRQTRTVPQSQTQPLHKVLPIKPA 936
Query: 301 VLVEHVVPASEPAA----RALDTQPRPKGPEKQFLKSPKGSG-----KPPGVPASSKSGK 351
+ E VP + A R DT+P K S G G K + S G+
Sbjct: 937 DVEEPAVPQTPRVASIQGRPQDTKPGVKRTVTHRTNSGGGDGPHISSKVRVIKLSGGGGE 996
Query: 352 AFSYYLPAVLPPQAPQDGHHLPQP 375
+ ++ P P + PQ PQP
Sbjct: 997 SDGFFHPEGQPQRLPQPPEVGPQP 1020
Score = 31.2 bits (69), Expect = 2.0
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 15/75 (20%)
Query: 320 QPRPKGPEKQFLKSPKGSGKPPGVPASSKSGKAFSYYLPAVLPPQAPQDG------HHLP 373
QP+P+ P++Q P +PP P + + P PPQ P HHL
Sbjct: 591 QPQPQQPQQQ----PPPQHQPPHQPPHQPPPQ---HQPPPQHPPQHPPQHQHHHHHHHLS 643
Query: 374 QPPPP--PYGHKRYR 386
PPPP P ++R
Sbjct: 644 VPPPPLMPMSQPQFR 658
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 46.2 bits (108), Expect = 6e-05
Identities = 16/29 (55%), Positives = 17/29 (58%)
Query: 422 GYAVPVIQRHEHHHHHEHHHHHHHHHFHP 450
G+ P H HHHHH H HHHHH HP
Sbjct: 134 GHLHPHHHHHPHHHHHHHAAAHHHHHHHP 162
Score = 43.1 bits (100), Expect = 5e-04
Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 419 AGEGYAVPVIQRHEHHHHHEHH---HHHHHHH 447
AG G + H HHHH HH HHHHHHH
Sbjct: 130 AGPGGHLHPHHHHHPHHHHHHHAAAHHHHHHH 161
Score = 39.3 bits (90), Expect = 0.007
Identities = 15/31 (48%), Positives = 16/31 (51%)
Query: 419 AGEGYAVPVIQRHEHHHHHEHHHHHHHHHFH 449
AG + P H H H HHH HHHHH H
Sbjct: 121 AGSTKSAPGAGPGGHLHPHHHHHPHHHHHHH 151
>gi|84105335 mesenchyme homeobox 2 [Homo sapiens]
Length = 304
Score = 45.8 bits (107), Expect = 8e-05
Identities = 14/18 (77%), Positives = 14/18 (77%)
Query: 429 QRHEHHHHHEHHHHHHHH 446
Q H HHHH HHHHHHHH
Sbjct: 63 QHHRGHHHHHHHHHHHHH 80
Score = 44.3 bits (103), Expect = 2e-04
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 430 RHEHHHHHEHHHHHHHHH 447
+H HHH HHHHHHHHH
Sbjct: 63 QHHRGHHHHHHHHHHHHH 80
Score = 44.3 bits (103), Expect = 2e-04
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 432 EHHHHHEHHHHHHHHHFH 449
+HH H HHHHHHHHH H
Sbjct: 63 QHHRGHHHHHHHHHHHHH 80
Score = 43.5 bits (101), Expect = 4e-04
Identities = 16/32 (50%), Positives = 16/32 (50%)
Query: 418 PAGEGYAVPVIQRHEHHHHHEHHHHHHHHHFH 449
P EG R HHHHH HHHHHH H
Sbjct: 54 PNEEGMFASQHHRGHHHHHHHHHHHHHQQQQH 85
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 45.8 bits (107), Expect = 8e-05
Identities = 57/224 (25%), Positives = 86/224 (38%), Gaps = 32/224 (14%)
Query: 194 EPTRCRMEGELAEEPRVADRRLSAHVRRPSTDPQPCSERGPYCVDENTERRNHYLDLAGI 253
+P RC +PRV S P+T P+P S +ERR ++ +
Sbjct: 272 DPCRCSSTAHRPPQPRVCT--FSPQRVSPTTSPRPASPV------PGSERRGSRPEMTPV 323
Query: 254 ENYTSRFGPGSPPVQAKQEP------------QGRASHLQAR---SRSQEPDTHAVHHRR 298
+++ GP +PP Q P AS Q+ +RS + T R
Sbjct: 324 SLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERP 383
Query: 299 SQVLVEHVVPASEPAARALDTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSGKAFSYYLP 358
S+ L PAS AL +Q R + + +P G G VP+ ++ ++ S
Sbjct: 384 SRRLTTGT-PASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQ 442
Query: 359 AVLPPQAPQDGHHLPQPPPPPYGHKRYRQKGREGHSPLKAPHAQ 402
AVL + +DG H P R R G G S + P A+
Sbjct: 443 AVLLVRRDRDGQHSWVP--------RGRGSGGSGRSTPQTPRAR 478
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 45.8 bits (107), Expect = 8e-05
Identities = 57/224 (25%), Positives = 86/224 (38%), Gaps = 32/224 (14%)
Query: 194 EPTRCRMEGELAEEPRVADRRLSAHVRRPSTDPQPCSERGPYCVDENTERRNHYLDLAGI 253
+P RC +PRV S P+T P+P S +ERR ++ +
Sbjct: 272 DPCRCSSTAHRPPQPRVCT--FSPQRVSPTTSPRPASPV------PGSERRGSRPEMTPV 323
Query: 254 ENYTSRFGPGSPPVQAKQEP------------QGRASHLQAR---SRSQEPDTHAVHHRR 298
+++ GP +PP Q P AS Q+ +RS + T R
Sbjct: 324 SLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERP 383
Query: 299 SQVLVEHVVPASEPAARALDTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSGKAFSYYLP 358
S+ L PAS AL +Q R + + +P G G VP+ ++ ++ S
Sbjct: 384 SRRLTTGT-PASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQ 442
Query: 359 AVLPPQAPQDGHHLPQPPPPPYGHKRYRQKGREGHSPLKAPHAQ 402
AVL + +DG H P R R G G S + P A+
Sbjct: 443 AVLLVRRDRDGQHSWVP--------RGRGSGGSGRSTPQTPRAR 478
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 45.4 bits (106), Expect = 1e-04
Identities = 60/259 (23%), Positives = 88/259 (33%), Gaps = 28/259 (10%)
Query: 162 SSGSSKTLRVKLTVSPEPSSKRKEGPPAGQDREPTRCRMEGELAEEPRVADRRLSAHVRR 221
S + + R + +P P G G P R EE R + R S R
Sbjct: 418 SRPTDQDYRPPASEAPPPEPPEPGGGGGGGGPSPER--------EEVRTSPRPASP-ARS 468
Query: 222 PSTDPQPCSERGPYCVDENTERRNHYLDLAGIENYTSRFGPGSPPVQAKQEPQGRASHLQ 281
S P+ +E P+ + + R L ++ S+F + + ++E L
Sbjct: 469 GSPAPETTNESVPFAQHSSLDSRIEML----LKEQRSKFSFLASDTEEEEENSSMV--LG 522
Query: 282 ARSRSQEPDTHAVHHRRSQVLVEHVVPASEPAARAL--DTQPRPKGPEKQFLKSPKGSGK 339
AR E + + H P + P A A D P G +SPK +G+
Sbjct: 523 ARDTGSEVPSGSGHG-----------PCTPPPAPANFEDVAPTGSGEPGATRESPKANGQ 571
Query: 340 PPGVPASSKSGKAFSYYLPAVLPPQAPQDGHHLPQPPPPPYGHKRYRQKGREGHSPLKAP 399
P SS S PP AP P PPPPP Y G+ P +
Sbjct: 572 NQASPCSSGDDMEISDDDRGGSPPPAPTPPQQPPPPPPPPPPPPPYLASLPLGYPPHQPA 631
Query: 400 HAQPATVEHEVVRDLPPTP 418
+ P + + PP P
Sbjct: 632 YLLPPRPDGPPPPEYPPPP 650
Score = 30.8 bits (68), Expect = 2.6
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 13/73 (17%)
Query: 308 PASEPAARALDTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSGKAFSYYLPAVLPPQAPQ 367
PA P + P P P P G PP PA Y LP P P
Sbjct: 596 PAPTPPQQPPPPPPPPPPPPPYLASLPLGY--PPHQPA---------YLLPP--RPDGPP 642
Query: 368 DGHHLPQPPPPPY 380
+ P PPPPP+
Sbjct: 643 PPEYPPPPPPPPH 655
>gi|27894361 nuclear receptor subfamily 4, group A, member 3 isoform
b [Homo sapiens]
Length = 637
Score = 45.4 bits (106), Expect = 1e-04
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 433 HHHHHEHHHHHHHHH 447
+HHHH HHHHHHHHH
Sbjct: 105 YHHHHHHHHHHHHHH 119
Score = 44.7 bits (104), Expect = 2e-04
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 431 HEHHHHHEHHHHHHHHHFHPS 451
H HHHHH HHHHH H PS
Sbjct: 107 HHHHHHHHHHHHHQQQHQQPS 127
Score = 44.3 bits (103), Expect = 2e-04
Identities = 13/19 (68%), Positives = 14/19 (73%)
Query: 431 HEHHHHHEHHHHHHHHHFH 449
+ HHHHH HHHHHHH H
Sbjct: 105 YHHHHHHHHHHHHHHQQQH 123
Score = 42.7 bits (99), Expect = 7e-04
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 430 RHEHHHHHEHHHHHHHHH 447
R +HHH HHHHHHHHH
Sbjct: 101 RAPSYHHHHHHHHHHHHH 118
Score = 37.4 bits (85), Expect = 0.028
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 426 PVIQRHEHHHHHEHHHHHHHHHFH 449
P+I+ E HHHHHHHHH H
Sbjct: 93 PLIKVEEGRAPSYHHHHHHHHHHH 116
Score = 30.4 bits (67), Expect = 3.4
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 431 HEHHHHHEHHHHHHHHHFHPS 451
H HHHHH H H P+
Sbjct: 111 HHHHHHHHHQQQHQQPSIPPA 131
>gi|27894359 nuclear receptor subfamily 4, group A, member 3 isoform
c [Homo sapiens]
Length = 443
Score = 45.4 bits (106), Expect = 1e-04
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 433 HHHHHEHHHHHHHHH 447
+HHHH HHHHHHHHH
Sbjct: 94 YHHHHHHHHHHHHHH 108
Score = 44.7 bits (104), Expect = 2e-04
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 431 HEHHHHHEHHHHHHHHHFHPS 451
H HHHHH HHHHH H PS
Sbjct: 96 HHHHHHHHHHHHHQQQHQQPS 116
Score = 44.3 bits (103), Expect = 2e-04
Identities = 13/19 (68%), Positives = 14/19 (73%)
Query: 431 HEHHHHHEHHHHHHHHHFH 449
+ HHHHH HHHHHHH H
Sbjct: 94 YHHHHHHHHHHHHHHQQQH 112
Score = 42.7 bits (99), Expect = 7e-04
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 430 RHEHHHHHEHHHHHHHHH 447
R +HHH HHHHHHHHH
Sbjct: 90 RAPSYHHHHHHHHHHHHH 107
Score = 37.4 bits (85), Expect = 0.028
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 426 PVIQRHEHHHHHEHHHHHHHHHFH 449
P+I+ E HHHHHHHHH H
Sbjct: 82 PLIKVEEGRAPSYHHHHHHHHHHH 105
Score = 30.4 bits (67), Expect = 3.4
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 431 HEHHHHHEHHHHHHHHHFHPS 451
H HHHHH H H P+
Sbjct: 100 HHHHHHHHHQQQHQQPSIPPA 120
>gi|27894357 nuclear receptor subfamily 4, group A, member 3 isoform
a [Homo sapiens]
Length = 626
Score = 45.4 bits (106), Expect = 1e-04
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 433 HHHHHEHHHHHHHHH 447
+HHHH HHHHHHHHH
Sbjct: 94 YHHHHHHHHHHHHHH 108
Score = 44.7 bits (104), Expect = 2e-04
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 431 HEHHHHHEHHHHHHHHHFHPS 451
H HHHHH HHHHH H PS
Sbjct: 96 HHHHHHHHHHHHHQQQHQQPS 116
Score = 44.3 bits (103), Expect = 2e-04
Identities = 13/19 (68%), Positives = 14/19 (73%)
Query: 431 HEHHHHHEHHHHHHHHHFH 449
+ HHHHH HHHHHHH H
Sbjct: 94 YHHHHHHHHHHHHHHQQQH 112
Score = 42.7 bits (99), Expect = 7e-04
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 430 RHEHHHHHEHHHHHHHHH 447
R +HHH HHHHHHHHH
Sbjct: 90 RAPSYHHHHHHHHHHHHH 107
Score = 37.4 bits (85), Expect = 0.028
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 426 PVIQRHEHHHHHEHHHHHHHHHFH 449
P+I+ E HHHHHHHHH H
Sbjct: 82 PLIKVEEGRAPSYHHHHHHHHHHH 105
Score = 30.4 bits (67), Expect = 3.4
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 431 HEHHHHHEHHHHHHHHHFHPS 451
H HHHHH H H P+
Sbjct: 100 HHHHHHHHHQQQHQQPSIPPA 120
>gi|27894355 nuclear receptor subfamily 4, group A, member 3 isoform
a [Homo sapiens]
Length = 626
Score = 45.4 bits (106), Expect = 1e-04
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 433 HHHHHEHHHHHHHHH 447
+HHHH HHHHHHHHH
Sbjct: 94 YHHHHHHHHHHHHHH 108
Score = 44.7 bits (104), Expect = 2e-04
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 431 HEHHHHHEHHHHHHHHHFHPS 451
H HHHHH HHHHH H PS
Sbjct: 96 HHHHHHHHHHHHHQQQHQQPS 116
Score = 44.3 bits (103), Expect = 2e-04
Identities = 13/19 (68%), Positives = 14/19 (73%)
Query: 431 HEHHHHHEHHHHHHHHHFH 449
+ HHHHH HHHHHHH H
Sbjct: 94 YHHHHHHHHHHHHHHQQQH 112
Score = 42.7 bits (99), Expect = 7e-04
Identities = 13/18 (72%), Positives = 14/18 (77%)
Query: 430 RHEHHHHHEHHHHHHHHH 447
R +HHH HHHHHHHHH
Sbjct: 90 RAPSYHHHHHHHHHHHHH 107
Score = 37.4 bits (85), Expect = 0.028
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 426 PVIQRHEHHHHHEHHHHHHHHHFH 449
P+I+ E HHHHHHHHH H
Sbjct: 82 PLIKVEEGRAPSYHHHHHHHHHHH 105
Score = 30.4 bits (67), Expect = 3.4
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 431 HEHHHHHEHHHHHHHHHFHPS 451
H HHHHH H H P+
Sbjct: 100 HHHHHHHHHQQQHQQPSIPPA 120
>gi|18765752 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1A isoform 2 [Homo sapiens]
Length = 754
Score = 45.1 bits (105), Expect = 1e-04
Identities = 15/21 (71%), Positives = 15/21 (71%), Gaps = 4/21 (19%)
Query: 431 HEHH----HHHEHHHHHHHHH 447
H HH HHH HHHHHHHHH
Sbjct: 590 HHHHGNSSHHHHHHHHHHHHH 610
Score = 44.7 bits (104), Expect = 2e-04
Identities = 15/21 (71%), Positives = 15/21 (71%), Gaps = 4/21 (19%)
Query: 433 HHHH----HEHHHHHHHHHFH 449
HHHH H HHHHHHHHH H
Sbjct: 590 HHHHGNSSHHHHHHHHHHHHH 610
Score = 43.1 bits (100), Expect = 5e-04
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 392 GHSPLKAPHAQPATVEHEVVRDLPPTPAGEGYAVPVIQRHEHHHHHEHHHHHHHH 446
G S +AP TVE V++ A + A+ + HHHH HHHHHHHH
Sbjct: 558 GWSGTEAP--TQVTVETHPVQETTFHVAPQQNALHHHHGNSSHHHHHHHHHHHHH 610
Score = 42.7 bits (99), Expect = 7e-04
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Query: 429 QRHEHHHHH----EHHHHHHHHHFH 449
Q++ HHHH HHHHHHHHH H
Sbjct: 585 QQNALHHHHGNSSHHHHHHHHHHHH 609
Score = 40.8 bits (94), Expect = 0.003
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 409 EVVRDLPPTPAGEGYAVPVIQRHEHHHHHEHHHHHHHHHFH 449
+V + P + P HHH + HHHHHHHH H
Sbjct: 567 QVTVETHPVQETTFHVAPQQNALHHHHGNSSHHHHHHHHHH 607
>gi|18765758 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1A isoform 1 [Homo sapiens]
Length = 763
Score = 45.1 bits (105), Expect = 1e-04
Identities = 15/21 (71%), Positives = 15/21 (71%), Gaps = 4/21 (19%)
Query: 431 HEHH----HHHEHHHHHHHHH 447
H HH HHH HHHHHHHHH
Sbjct: 599 HHHHGNSSHHHHHHHHHHHHH 619
Score = 44.7 bits (104), Expect = 2e-04
Identities = 15/21 (71%), Positives = 15/21 (71%), Gaps = 4/21 (19%)
Query: 433 HHHH----HEHHHHHHHHHFH 449
HHHH H HHHHHHHHH H
Sbjct: 599 HHHHGNSSHHHHHHHHHHHHH 619
Score = 43.1 bits (100), Expect = 5e-04
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 392 GHSPLKAPHAQPATVEHEVVRDLPPTPAGEGYAVPVIQRHEHHHHHEHHHHHHHH 446
G S +AP TVE V++ A + A+ + HHHH HHHHHHHH
Sbjct: 567 GWSGTEAP--TQVTVETHPVQETTFHVAPQQNALHHHHGNSSHHHHHHHHHHHHH 619
Score = 42.7 bits (99), Expect = 7e-04
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Query: 429 QRHEHHHHH----EHHHHHHHHHFH 449
Q++ HHHH HHHHHHHHH H
Sbjct: 594 QQNALHHHHGNSSHHHHHHHHHHHH 618
Score = 40.8 bits (94), Expect = 0.003
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 409 EVVRDLPPTPAGEGYAVPVIQRHEHHHHHEHHHHHHHHHFH 449
+V + P + P HHH + HHHHHHHH H
Sbjct: 576 QVTVETHPVQETTFHVAPQQNALHHHHGNSSHHHHHHHHHH 616
>gi|169216868 PREDICTED: similar to testis expressed sequence 13A
[Homo sapiens]
Length = 714
Score = 44.7 bits (104), Expect = 2e-04
Identities = 47/236 (19%), Positives = 86/236 (36%), Gaps = 18/236 (7%)
Query: 15 RRESPEGDSFVASAYASGRKGAEEAERRARDKQELP---NGDPKEGPFREDQCPLQVALP 71
+ E PEG + + E + RA+ L + P+EGP R PL +
Sbjct: 455 KEEGPEGPQRIVLQGDNRSYSQEGSPERAQGMATLVFSRSCKPEEGPERPQDTPLGDSRS 514
Query: 72 AEKAEGREHPGQLLSADDGERAANREGPRGPGGQRLNIDALQCDVSVEEDDRQEWTFTLY 131
K EG E P +++ D + P G + + C + Q+
Sbjct: 515 HIKEEGPEGPQRIVLQGDNRSYSQEGSPERAQGMATLVFSRSCKPEEGPERPQDTPLG-- 572
Query: 132 DFDNCGKVTREDMSSLMHTIYEVVDASVNHSSGSSK-----TLRVKLTVSPEPSSKRKEG 186
D+ + E + + + S + + TL + PE +R +G
Sbjct: 573 --DSRSHIKEEGPEGPQRIVLQGDNRSYSQEGSRERAQGMATLVFSRSCKPEEGPERPQG 630
Query: 187 PPAGQDRE------PTRCRMEGELAEEPRVADRRLSAHVRRPSTDPQPCSERGPYC 236
P G R P + + + + A++P+V S +P++ P P + + P+C
Sbjct: 631 TPLGDSRSHGVRESPKKWQPQRQKAKKPKVNKVSGSQQQEKPASFPVPVNWKCPWC 686
Score = 32.3 bits (72), Expect = 0.90
Identities = 82/360 (22%), Positives = 130/360 (36%), Gaps = 35/360 (9%)
Query: 17 ESPEGDSFVASAYASGRKGAEEAERRARDKQELPNGD---PKEGPFREDQCPLQVALPAE 73
ESP+G + + S SG EE + L N + KEGP R + V +
Sbjct: 336 ESPQGTAPLGS---SGCHSQEEGTEGPQGMDPLGNRERQNQKEGPKRARRMHTLVFRRSH 392
Query: 74 KAEGREHPGQLLSADDGERAANREGPRGPGGQRLNIDALQCDVSVEEDDRQEWTFTLYDF 133
K+EG E P + D R+ ++EG + + ++ E R +WT L
Sbjct: 393 KSEGPEGPQGTVPQGD-SRSYSQEGCSDRAQEMATLVFIR-RCKPEGPKRPQWTVPL--G 448
Query: 134 DNCGKVTREDMSSLMHTIYEVVDASVNHSSGSSKTLRVKLTVSPEPSSKRKEGPPAGQDR 193
D+ + E + + + S + GS + + T+ S K +EGP QD
Sbjct: 449 DSRSHIKEEGPEGPQRIVLQGDNRSYS-QEGSPERAQGMATLVFSRSCKPEEGPERPQDT 507
Query: 194 E--PTRCRMEGELAEEP-RVADRRLSAHVRRPSTDPQPCSERG-------PYCVDENTER 243
+R ++ E E P R+ L R S + P +G C E
Sbjct: 508 PLGDSRSHIKEEGPEGPQRIV---LQGDNRSYSQEGSPERAQGMATLVFSRSCKPEEGPE 564
Query: 244 RNHYLDLAGIENYTSRFGPGSPPVQAKQEPQGRASHLQARSRSQEPDTHAVHHRRSQVLV 303
R L ++ GP P Q S +R R+Q T + RS
Sbjct: 565 RPQDTPLGDSRSHIKEEGPEGPQRIVLQGDNRSYSQEGSRERAQGMAT--LVFSRSCKPE 622
Query: 304 E-----HVVPASEPAARALDTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSGKAFSYYLP 358
E P + + + P+ P++Q K PK + V S + K S+ +P
Sbjct: 623 EGPERPQGTPLGDSRSHGVRESPKKWQPQRQKAKKPKVN----KVSGSQQQEKPASFPVP 678
>gi|55770830 chromobox homolog 4 [Homo sapiens]
Length = 560
Score = 44.3 bits (103), Expect = 2e-04
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 362 PPQAPQDGHHLPQPPPPPYGHKRYRQ-KGREGHSPLKAPHAQPATVEHEVVRDLPPTPAG 420
P + ++ + P P G ++ K G PL+ +P + + R+ P
Sbjct: 325 PKRREEEVSGVSDPQPQDAGSRKLSPTKEAFGEQPLQLT-TKPDLLAWDPARNTHP---- 379
Query: 421 EGYAVPVIQRHEHHHHHEHHHHHHHH 446
P H H HHH HHHHHHHH
Sbjct: 380 -----PSHHPHPHPHHHHHHHHHHHH 400
Score = 42.7 bits (99), Expect = 7e-04
Identities = 13/17 (76%), Positives = 13/17 (76%)
Query: 431 HEHHHHHEHHHHHHHHH 447
H H H H HHHHHHHHH
Sbjct: 383 HPHPHPHHHHHHHHHHH 399
Score = 42.4 bits (98), Expect = 9e-04
Identities = 13/17 (76%), Positives = 13/17 (76%)
Query: 433 HHHHHEHHHHHHHHHFH 449
H H H HHHHHHHHH H
Sbjct: 383 HPHPHPHHHHHHHHHHH 399
Score = 42.0 bits (97), Expect = 0.001
Identities = 13/19 (68%), Positives = 13/19 (68%)
Query: 431 HEHHHHHEHHHHHHHHHFH 449
H H H HHHHHHHHH H
Sbjct: 382 HHPHPHPHHHHHHHHHHHH 400
Score = 35.4 bits (80), Expect = 0.11
Identities = 12/24 (50%), Positives = 12/24 (50%)
Query: 426 PVIQRHEHHHHHEHHHHHHHHHFH 449
P H HH H HHHHHH H
Sbjct: 373 PARNTHPPSHHPHPHPHHHHHHHH 396
>gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens]
Length = 1114
Score = 44.3 bits (103), Expect = 2e-04
Identities = 42/153 (27%), Positives = 53/153 (34%), Gaps = 40/153 (26%)
Query: 306 VVPASEPAARALDTQPRPKGPEKQFLKSPKGSGKPPGVPASSKSGKAFSYYLPAVLPPQA 365
++ + RA T+ P P + S G G SK GK PPQA
Sbjct: 938 IISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFG----SKRGKP---------PPQA 984
Query: 366 PQDGHHLPQPP--PPPYGHKRYRQKGREGHSPLKAPHAQPATVEHEV-VRDLPPTPAGEG 422
HLP P PPP H P+ PH Q + H + + P A G
Sbjct: 985 -----HLPSAPALPPP-------------HPPVVLPHLQHSVAGHHLGPPEGLPQAAMHG 1026
Query: 423 YAVPVIQR------HEHHHHHEHHHHHHHHHFH 449
+ H HHHHH H H H +H
Sbjct: 1027 HHTQYCHMQNPPPYHHHHHHHPPQHIQHAHQYH 1059
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,182,250
Number of Sequences: 37866
Number of extensions: 1537390
Number of successful extensions: 11893
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 528
Number of HSP's that attempted gapping in prelim test: 7044
Number of HSP's gapped (non-prelim): 2848
length of query: 451
length of database: 18,247,518
effective HSP length: 106
effective length of query: 345
effective length of database: 14,233,722
effective search space: 4910634090
effective search space used: 4910634090
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.