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Search of human proteins with 148664207
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148664207 adhesion molecule, interacts with CXADR antigen 1
isoform 1 [Homo sapiens]
(394 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148664207 adhesion molecule, interacts with CXADR antigen 1 i... 800 0.0
gi|148664224 adhesion molecule, interacts with CXADR antigen 1 i... 773 0.0
gi|4506357 myelin protein zero-like 1 isoform a [Homo sapiens] 55 1e-07
gi|46358426 myelin protein zero-like 1 isoform b [Homo sapiens] 54 2e-07
gi|4759066 sodium channel, voltage-gated, type II, beta [Homo sa... 53 4e-07
gi|4503173 coxsackie virus and adenovirus receptor precursor [Ho... 50 3e-06
gi|38093645 myelin protein zero-like 3 [Homo sapiens] 50 3e-06
gi|4505243 myelin protein zero [Homo sapiens] 49 6e-06
gi|139948432 adlican [Homo sapiens] 47 3e-05
gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens] 46 5e-05
gi|21536337 myelin protein zero-like 2 precursor [Homo sapiens] 46 7e-05
gi|5032247 myelin protein zero-like 2 precursor [Homo sapiens] 46 7e-05
gi|62865876 immunoglobulin superfamily, member 11 isoform b [Hom... 44 3e-04
gi|75709184 contactin 3 [Homo sapiens] 44 3e-04
gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens] 43 4e-04
gi|62865874 immunoglobulin superfamily, member 11 isoform a [Hom... 43 6e-04
gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens] 41 0.002
gi|21361429 V-set and immunoglobulin domain containing 2 [Homo s... 41 0.002
gi|9055238 voltage-gated sodium channel beta-3 subunit precursor... 40 0.003
gi|93587332 voltage-gated sodium channel beta-3 subunit precurso... 40 0.003
gi|11386199 poliovirus receptor-related 3 [Homo sapiens] 40 0.003
gi|58331253 obscurin, cytoskeletal calmodulin and titin-interact... 39 0.006
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 39 0.006
gi|28372555 sodium channel, voltage-gated, type IV, beta isoform... 39 0.008
gi|32699028 V-set and immunoglobulin domain containing 1 [Homo s... 39 0.008
gi|94538343 sialic acid binding Ig-like lectin 8 [Homo sapiens] 38 0.014
gi|7657232 interleukin 1 receptor accessory protein-like 1 precu... 38 0.014
gi|63054855 erythroblast membrane-associated protein precursor [... 38 0.014
gi|19923536 erythroblast membrane-associated protein precursor [... 38 0.014
gi|31542244 leucine rich repeat and fibronectin type III domain ... 37 0.024
>gi|148664207 adhesion molecule, interacts with CXADR antigen 1
isoform 1 [Homo sapiens]
Length = 394
Score = 800 bits (2067), Expect = 0.0
Identities = 394/394 (100%), Positives = 394/394 (100%)
Query: 1 MFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLS 60
MFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLS
Sbjct: 1 MFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLS 60
Query: 61 PGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRL 120
PGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRL
Sbjct: 61 PGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRL 120
Query: 121 KGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCVFQSTEVKHVTKVEWIFSGRRAKEE 180
KGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCVFQSTEVKHVTKVEWIFSGRRAKEE
Sbjct: 121 KGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCVFQSTEVKHVTKVEWIFSGRRAKEE 180
Query: 181 IVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGN 240
IVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGN
Sbjct: 181 IVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGN 240
Query: 241 LVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLVIIVGIVCATILLLPVLILIVKKTC 300
LVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLVIIVGIVCATILLLPVLILIVKKTC
Sbjct: 241 LVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLVIIVGIVCATILLLPVLILIVKKTC 300
Query: 301 GNKSSVNSTVLVKNTKKTNPEIKEKPCHFERCEGEKHIYSPIIVREVIEEEEPSEKSEAT 360
GNKSSVNSTVLVKNTKKTNPEIKEKPCHFERCEGEKHIYSPIIVREVIEEEEPSEKSEAT
Sbjct: 301 GNKSSVNSTVLVKNTKKTNPEIKEKPCHFERCEGEKHIYSPIIVREVIEEEEPSEKSEAT 360
Query: 361 YMTMHPVWPSLRSDRNNSLEKKSGGGMPKTQQAF 394
YMTMHPVWPSLRSDRNNSLEKKSGGGMPKTQQAF
Sbjct: 361 YMTMHPVWPSLRSDRNNSLEKKSGGGMPKTQQAF 394
>gi|148664224 adhesion molecule, interacts with CXADR antigen 1
isoform 2 [Homo sapiens]
Length = 384
Score = 773 bits (1996), Expect = 0.0
Identities = 380/380 (100%), Positives = 380/380 (100%)
Query: 15 DYSLGLNDLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYY 74
DYSLGLNDLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYY
Sbjct: 5 DYSLGLNDLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYY 64
Query: 75 SNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLH 134
SNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLH
Sbjct: 65 SNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLH 124
Query: 135 VLPEEPKELMVHVGGLIQMGCVFQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVE 194
VLPEEPKELMVHVGGLIQMGCVFQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVE
Sbjct: 125 VLPEEPKELMVHVGGLIQMGCVFQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVE 184
Query: 195 YSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPE 254
YSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPE
Sbjct: 185 YSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPE 244
Query: 255 EPRTLVTPAALRPLVLGGNQLVIIVGIVCATILLLPVLILIVKKTCGNKSSVNSTVLVKN 314
EPRTLVTPAALRPLVLGGNQLVIIVGIVCATILLLPVLILIVKKTCGNKSSVNSTVLVKN
Sbjct: 245 EPRTLVTPAALRPLVLGGNQLVIIVGIVCATILLLPVLILIVKKTCGNKSSVNSTVLVKN 304
Query: 315 TKKTNPEIKEKPCHFERCEGEKHIYSPIIVREVIEEEEPSEKSEATYMTMHPVWPSLRSD 374
TKKTNPEIKEKPCHFERCEGEKHIYSPIIVREVIEEEEPSEKSEATYMTMHPVWPSLRSD
Sbjct: 305 TKKTNPEIKEKPCHFERCEGEKHIYSPIIVREVIEEEEPSEKSEATYMTMHPVWPSLRSD 364
Query: 375 RNNSLEKKSGGGMPKTQQAF 394
RNNSLEKKSGGGMPKTQQAF
Sbjct: 365 RNNSLEKKSGGGMPKTQQAF 384
>gi|4506357 myelin protein zero-like 1 isoform a [Homo sapiens]
Length = 269
Score = 55.1 bits (131), Expect = 1e-07
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 140 PKELMVHVGGLIQMGCVFQSTEVKH-VTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQS 198
PKE+ V G ++ C F+ST +T V W F A + F +Y + ++ Y +
Sbjct: 43 PKEIFVANGTQGKLTCKFKSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQV---YLGN 99
Query: 199 WGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRT 258
+ F++R++ GD+ + D SI ++ ++ G Y C + P
Sbjct: 100 YPPFKDRISWAGDLDKKDASINIENMQFIHNGTYICDV----------------KNPPDI 143
Query: 259 LVTPAALRPLVLGGNQLV-----IIVGIVCATILLLPVLILIVKKTCGNKSSVNSTVLVK 313
+V P +R V+ L ++VGIV A +L L +LI ++ + +
Sbjct: 144 VVQPGHIRLYVVEKENLPVFPVWVVVGIVTAVVLGLTLLISMILAVLYRRKNSKRDYTGC 203
Query: 314 NTKKTNPEIKEKP 326
+T ++ +K+ P
Sbjct: 204 STSESLSPVKQAP 216
Score = 49.3 bits (116), Expect = 6e-06
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
Query: 19 GLNDLNV-SPPELTVHVGDSALMGCVFQSTEDKC-IFKIDWTLSPGEHAKDEYVLYYYSN 76
G++ L V +P E+ V G + C F+ST + + W+ P E A ++YS
Sbjct: 34 GVSALEVYTPKEIFVANGTQGKLTCKFKSTSTTGGLTSVSWSFQP-EGADTTVSFFHYSQ 92
Query: 77 LSVPIGR---FQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVL 133
V +G F++R+ GD+ D S+ ++++Q GTYIC+++ + V + L
Sbjct: 93 GQVYLGNYPPFKDRISWAGDLDKKDASINIENMQFIHNGTYICDVKNPPDIVVQPGHIRL 152
Query: 134 HVLPEE 139
+V+ +E
Sbjct: 153 YVVEKE 158
>gi|46358426 myelin protein zero-like 1 isoform b [Homo sapiens]
Length = 209
Score = 53.9 bits (128), Expect = 2e-07
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 25/163 (15%)
Query: 140 PKELMVHVGGLIQMGCVFQSTEVKH-VTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQS 198
PKE+ V G ++ C F+ST +T V W F A + F +Y + ++ Y +
Sbjct: 43 PKEIFVANGTQGKLTCKFKSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQV---YLGN 99
Query: 199 WGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRT 258
+ F++R++ GD+ + D SI ++ ++ G Y C + P
Sbjct: 100 YPPFKDRISWAGDLDKKDASINIENMQFIHNGTYICDV----------------KNPPDI 143
Query: 259 LVTPAALRPLVLGGNQLV-----IIVGIVCATILLLPVLILIV 296
+V P +R V+ L ++VGIV A +L L +LI ++
Sbjct: 144 VVQPGHIRLYVVEKENLPVFPVWVVVGIVTAVVLGLTLLISMI 186
Score = 49.3 bits (116), Expect = 6e-06
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
Query: 19 GLNDLNV-SPPELTVHVGDSALMGCVFQSTEDKC-IFKIDWTLSPGEHAKDEYVLYYYSN 76
G++ L V +P E+ V G + C F+ST + + W+ P E A ++YS
Sbjct: 34 GVSALEVYTPKEIFVANGTQGKLTCKFKSTSTTGGLTSVSWSFQP-EGADTTVSFFHYSQ 92
Query: 77 LSVPIGR---FQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVL 133
V +G F++R+ GD+ D S+ ++++Q GTYIC+++ + V + L
Sbjct: 93 GQVYLGNYPPFKDRISWAGDLDKKDASINIENMQFIHNGTYICDVKNPPDIVVQPGHIRL 152
Query: 134 HVLPEE 139
+V+ +E
Sbjct: 153 YVVEKE 158
>gi|4759066 sodium channel, voltage-gated, type II, beta [Homo
sapiens]
Length = 215
Score = 53.1 bits (126), Expect = 4e-07
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 27 PPELTVHVGDSALMGCVFQS--TEDKCIFKIDWTLSPGEHAKDEYVLYYYSNL-SVPIGR 83
P L V G A + C F S T + F ++WT + +E L + + ++ + R
Sbjct: 35 PATLNVLNGSDARLPCTFNSCYTVNHKQFSLNWTYQECNNCSEEMFLQFRMKIINLKLER 94
Query: 84 FQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKE 142
FQ+RV G+ D S++L++VQ D+G Y C I + + L VL EEP E
Sbjct: 95 FQDRVEFSGNPSKYDVSVMLRNVQPEDEGIYNCYIMNPPDRHRGHGKIHLQVLMEEPPE 153
Score = 38.9 bits (89), Expect = 0.008
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 28/172 (16%)
Query: 140 PKELMVHVGGLIQMGCVFQST-EVKHVT-KVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQ 197
P L V G ++ C F S V H + W + E +F + ++++ +
Sbjct: 35 PATLNVLNGSDARLPCTFNSCYTVNHKQFSLNWTYQECNNCSEEMFLQFRMKIINLKLER 94
Query: 198 SWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSI------HLGNLVFKKTIVLHV 251
FQ+RV G+ + D S+ML+ V+ D G Y C I H G+ +++
Sbjct: 95 ----FQDRVEFSGNPSKYDVSVMLRNVQPEDEGIYNCYIMNPPDRHRGHGKIHLQVLMEE 150
Query: 252 SPEEPRTLVTPAALRPLVLGGNQLVIIVGIVCATILLLPVLILIVKKTCGNK 303
PE T + +IVG L + +L+L+V K K
Sbjct: 151 PPERDST----------------VAVIVGASVGGFLAVVILVLMVVKCVRRK 186
>gi|4503173 coxsackie virus and adenovirus receptor precursor [Homo
sapiens]
Length = 365
Score = 50.4 bits (119), Expect = 3e-06
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 5 LKLILLPVLLDYSLGLNDLNVSPPELTVHV--GDSALMGCVFQ-STEDKCIFKIDWTLSP 61
L +LL ++D++ L+++ PE + G++A + C F S ED+ I+W +SP
Sbjct: 5 LCFVLLCGVVDFA---RSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISP 61
Query: 62 GEHAKDEYVLYYYSNLSVPIGRF---QNRVHL-MGDILCNDGSLLLQDVQEADQGTYICE 117
++ K + V+ YS + + + RVH D+ D S+ + ++Q +D GTY C+
Sbjct: 62 ADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCK 121
Query: 118 IRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCVFQ 158
+ K V K + L VL +P +V G ++G F+
Sbjct: 122 V--KKAPGVANKKIHLVVL-VKPSGARCYVDGSEEIGSDFK 159
Score = 28.9 bits (63), Expect = 8.4
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 18/142 (12%)
Query: 140 PKELMVHVGG-LIQMGCVFQ-STEVKHVTKVEWIFS---GRRAKEEIVFRYYHKLRMSVE 194
P+E++ G + C F S E + +EW+ S ++ + I+ K+
Sbjct: 25 PEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKI----- 79
Query: 195 YSQSWGHFQNRVNLVG-DIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSP 253
Y + + RV+ D+ D SI + ++ SD G Y C + V K I L V
Sbjct: 80 YDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV-- 137
Query: 254 EEPRTLVTPAALRPLVLGGNQL 275
LV P+ R V G ++
Sbjct: 138 -----LVKPSGARCYVDGSEEI 154
>gi|38093645 myelin protein zero-like 3 [Homo sapiens]
Length = 235
Score = 50.4 bits (119), Expect = 3e-06
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 146 HVGGLIQMGCVFQST-EVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQN 204
+VG I++ C F+ST +V ++W + + + +Y S +Y + G F++
Sbjct: 43 YVGEKIKLKCTFKSTSDVTDKLTIDWTYRPPSSSHTVSIFHYQ----SFQYPTTAGTFRD 98
Query: 205 RVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAA 264
R++ VG++++ D SI + D G ++C++ K +H + VT
Sbjct: 99 RISWVGNVYKGDASISISNPTIKDNGTFSCAV-------KNPPDVHHNIPMTELTVTERG 151
Query: 265 LRPLVLGGNQLVIIVGIVCATILLLPVLILIVKKTCGNKSSVNSTVLVKNTKKTNPEIKE 324
++ L I+V + A ++ L +L+ + +K G K S KK++ E+ +
Sbjct: 152 FGTMLSSVALLSILVFVPSAVVVAL-LLVRMGRKAAGLKKRSRS-----GYKKSSIEVSD 205
Score = 45.8 bits (107), Expect = 7e-05
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 33 HVGDSALMGCVFQSTEDKCI-FKIDWTLSPGEHAKDEYVLYYYS-NLSVPIGRFQNRVHL 90
+VG+ + C F+ST D IDWT P + + +Y S G F++R+
Sbjct: 43 YVGEKIKLKCTFKSTSDVTDKLTIDWTYRPPSSSHTVSIFHYQSFQYPTTAGTFRDRISW 102
Query: 91 MGDILCNDGSLLLQDVQEADQGTYICEIR 119
+G++ D S+ + + D GT+ C ++
Sbjct: 103 VGNVYKGDASISISNPTIKDNGTFSCAVK 131
>gi|4505243 myelin protein zero [Homo sapiens]
Length = 258
Score = 49.3 bits (116), Expect = 6e-06
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 141 KELMVHVGGLIQMGCVFQSTE-VKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSW 199
+E+ VG + + C F S+E V W + ++ I +Y K Y
Sbjct: 46 REVHGAVGSRVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAK---GQPYIDEV 102
Query: 200 GHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKT--IVLHVSPEEPR 257
G F+ R+ VGD DGSI++ + SD G +TC + + KT + L+V + P
Sbjct: 103 GTFKERIQWVGDPRWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPT 162
Query: 258 TLVTPAALRPLVLGGNQLVIIVGIVCATILLLPVLILIVK 297
+VLG ++G V +LLL +L +V+
Sbjct: 163 RY-------GVVLGA-----VIGGVLGVVLLLLLLFYVVR 190
Score = 48.5 bits (114), Expect = 1e-05
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 15/175 (8%)
Query: 9 LLPVLLDYSLGLNDLN--VSPPELTVH--VGDSALMGCVFQSTE---DKCIFKIDWTLSP 61
+L VLL SL L+ V + VH VG + C F S+E D F W P
Sbjct: 23 ILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHCSFWSSEWVSDDISFT--WRYQP 80
Query: 62 GEHAKDEYVLYYYSNLSV---PIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEI 118
E +D +++Y+ +G F+ R+ +GD DGS+++ ++ +D GT+ C++
Sbjct: 81 -EGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDGSIVIHNLDYSDNGTFTCDV 139
Query: 119 RLKGESQVFKKAVVLHVLPEEPKELMVHVGGLI--QMGCVFQSTEVKHVTKVEWI 171
+ + V L+V + P V +G +I +G V + +V + W+
Sbjct: 140 KNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVLLLLLLFYVVRYCWL 194
>gi|139948432 adlican [Homo sapiens]
Length = 2828
Score = 47.0 bits (110), Expect = 3e-05
Identities = 71/344 (20%), Positives = 137/344 (39%), Gaps = 72/344 (20%)
Query: 48 EDKCIFKIDWTLSPG--EHAKD-EYVLYYYSNL----------------SVPIGRFQNRV 88
+D + K+D + P EH ++ ++ ++Y +L S+P G N
Sbjct: 2229 DDYVVLKVDVVMKPAKIEHKEENDHKVFYGGDLKVDCVATGLPNPEISWSLPDGSLVNSF 2288
Query: 89 HLMGD--------ILCNDGSLLLQDVQEADQGTYICEIRL---KGESQVFKKAVVLHVLP 137
D ++ N+G+L +V ++G Y C K E +V K V
Sbjct: 2289 MQSDDSGGRTKRYVVFNNGTLYFNEVGMREEGDYTCFAENQVGKDEMRVRVKVVTAPATI 2348
Query: 138 EEPKELMVHV--GGLIQMGCVFQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEY 195
L V V G ++ + C + + + KV W+ + + S E
Sbjct: 2349 RNKTYLAVQVPYGDVVTVAC---EAKGEPMPKVTWLSPTNKV-----------IPTSSEK 2394
Query: 196 SQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEE 255
Q + DG++++Q + SD GNYTC + +KT+ +HV+ +
Sbjct: 2395 YQIY---------------QDGTLLIQKAQRSDSGNYTCLVRNSAGEDRKTVWIHVNVQP 2439
Query: 256 PRTLVTP---AALRPLVLGGNQLVI---IVGIVCATIL-LLPVLILIVKKTCGNKSSV-- 306
P+ P +R + GG++ +I GI +L P +++ GN+ +V
Sbjct: 2440 PKINGNPNPITTVREIAAGGSRKLIDCKAEGIPTPRVLWAFPEGVVLPAPYYGNRITVHG 2499
Query: 307 NSTVLVKNTKKTNPEIKEKPCHFERCEGEKHIYSPIIVREVIEE 350
N ++ +++ +K+ + + C GE + + V E +E+
Sbjct: 2500 NGSLDIRSLRKS--DSVQLVCMARNEGGEARLILQLTVLEPMEK 2541
Score = 37.0 bits (84), Expect = 0.031
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 98 DGSLLLQDVQEADQGTYICEI-RLKGESQVFKKAVVLHVLPEEP-------KELMVHVGG 149
+G+L+++ VQ D+G Y+C L G + + V+L V ++P +++ V++G
Sbjct: 1910 NGTLVIRKVQVQDRGQYMCTASNLHG---LDRMVVLLSVTVQQPQILASHYQDVTVYLGD 1966
Query: 150 LIQMGCVFQSTEVKHVTKVEWIFSGRRAKEEI 181
I M C+ + T ++ WIF RR + +
Sbjct: 1967 TIAMECLAKGTP---APQISWIFPDRRVWQTV 1995
Score = 29.6 bits (65), Expect = 4.9
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 98 DGSLLLQDVQEADQGTYICEIRLK-GESQVFKKAVVL----HVLPEEPKELMVHVGGLIQ 152
+G+L+++ V + D G Y+C R K G+ V K V+ + +E + V GG ++
Sbjct: 2203 NGTLVVKSVTDKDAGDYLCVARNKVGDDYVVLKVDVVMKPAKIEHKEENDHKVFYGGDLK 2262
Query: 153 MGCV 156
+ CV
Sbjct: 2263 VDCV 2266
Score = 28.9 bits (63), Expect = 8.4
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Query: 82 GRFQ----NRVHLMGD------ILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAV 131
GRF N +HL G L ++G+L +++ D+GTY+C + + V V
Sbjct: 2667 GRFSWTLPNGMHLEGPQTLGRVSLLDNGTLTVREASVFDRGTYVCRMETEYGPSVTSIPV 2726
Query: 132 VLHVLP-----EEPKELMVHVGGLIQMGCV 156
++ P E + G +++ C+
Sbjct: 2727 IVIAYPPRITSEPTPVIYTRPGNTVKLNCM 2756
>gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens]
Length = 373
Score = 46.2 bits (108), Expect = 5e-05
Identities = 64/302 (21%), Positives = 128/302 (42%), Gaps = 52/302 (17%)
Query: 5 LKLILLPVLLDYSLGLNDLNVSPPELTVHVGDSALMGCVFQ-STEDKCIFKIDWTLSPGE 63
+ L+LL +L+ Y +G + E+ + + C Q +K I+W L+ E
Sbjct: 1 MSLLLLLLLVSYYVGTLGTHT---EIKRVAEEKVTLPCHHQLGLPEKDTLDIEWLLTDNE 57
Query: 64 HAKDEYVLY----YYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIR 119
+ + Y Y+NL+ + RV + L D SL ++ ++ +D+G Y C+++
Sbjct: 58 GNQKVVITYSSRHVYNNLTE---EQKGRVAFASNFLAGDASLQIEPLKPSDEGRYTCKVK 114
Query: 120 LKGE---SQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCVFQSTEVKHVTKVEWIFSGRR 176
G S V K +V P+ E + G + + C S
Sbjct: 115 NSGRYVWSHVILKVLVRPSKPKCELEGELTEGSDLTLQCESSS----------------- 157
Query: 177 AKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSI 236
E IV+ Y+ ++R E ++R++ + + G ++LQ + S G Y C+
Sbjct: 158 GTEPIVY-YWQRIR-EKEGEDERLPPKSRID-----YNHPGRVLLQNLTMSYSGLYQCT- 209
Query: 237 HLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLVIIVGIVCATILLLPVLILIV 296
GN K++ V+ V+ + +++ +V G + GIV +L+ ++ L++
Sbjct: 210 -AGNEAGKESCVVRVTVQYVQSI-------GMVAGA-----VTGIVAGALLIFLLVWLLI 256
Query: 297 KK 298
++
Sbjct: 257 RR 258
>gi|21536337 myelin protein zero-like 2 precursor [Homo sapiens]
Length = 215
Score = 45.8 bits (107), Expect = 7e-05
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 35 GDSALMGCVFQSTEDKC-IFKIDWTLSPGEHAKDEYVLYYYSNLSVPI-GRFQNRVHLMG 92
G A + C F S + W P + +++V YY+ + P+ GRF++RV G
Sbjct: 40 GTDARLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDG 99
Query: 93 DILCNDGSLLLQDVQEADQGTYICEIR 119
+ D S+LL +Q D GTY C+++
Sbjct: 100 NPERYDASILLWKLQFDDNGTYTCQVK 126
Score = 36.6 bits (83), Expect = 0.040
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 152 QMGCVFQS-TEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVG 210
++ C F S V V W F E YYH + G F++RV+ G
Sbjct: 44 RLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYH----IDPFQPMSGRFKDRVSWDG 99
Query: 211 DIFRNDGSIMLQGVRESDGGNYTCSI 236
+ R D SI+L ++ D G YTC +
Sbjct: 100 NPERYDASILLWKLQFDDNGTYTCQV 125
>gi|5032247 myelin protein zero-like 2 precursor [Homo sapiens]
Length = 215
Score = 45.8 bits (107), Expect = 7e-05
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 35 GDSALMGCVFQSTEDKC-IFKIDWTLSPGEHAKDEYVLYYYSNLSVPI-GRFQNRVHLMG 92
G A + C F S + W P + +++V YY+ + P+ GRF++RV G
Sbjct: 40 GTDARLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDG 99
Query: 93 DILCNDGSLLLQDVQEADQGTYICEIR 119
+ D S+LL +Q D GTY C+++
Sbjct: 100 NPERYDASILLWKLQFDDNGTYTCQVK 126
Score = 36.6 bits (83), Expect = 0.040
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 152 QMGCVFQS-TEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVG 210
++ C F S V V W F E YYH + G F++RV+ G
Sbjct: 44 RLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYH----IDPFQPMSGRFKDRVSWDG 99
Query: 211 DIFRNDGSIMLQGVRESDGGNYTCSI 236
+ R D SI+L ++ D G YTC +
Sbjct: 100 NPERYDASILLWKLQFDDNGTYTCQV 125
>gi|62865876 immunoglobulin superfamily, member 11 isoform b [Homo
sapiens]
Length = 431
Score = 43.9 bits (102), Expect = 3e-04
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 4 PLKLILLPVLLDYSLGLNDLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLSPGE 63
PL +LL L + L +++ SP + V G A++ C F ++ + W ++P
Sbjct: 7 PLAPLLLLSLHGVAASL-EVSESPGSIQVARGQPAVLPCTFTTSAALINLNVIWMVTPLS 65
Query: 64 HAK--DEYVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYIC 116
+A ++ +LY + RF RV G + + S+ + + Q +D GTY C
Sbjct: 66 NANQPEQVILYQGGQMFDGAPRFHGRVGFTGTMPATNVSIFINNTQLSDTGTYQC 120
>gi|75709184 contactin 3 [Homo sapiens]
Length = 1028
Score = 43.5 bits (101), Expect = 3e-04
Identities = 40/174 (22%), Positives = 69/174 (39%), Gaps = 36/174 (20%)
Query: 95 LCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELM-------VHV 147
L NDG L + +V +AD GTY C E+Q K H++ EP + V V
Sbjct: 458 LLNDGGLKIANVTKADAGTYTC----MAENQFGKANGTTHLVVTEPTRITLAPSNMDVSV 513
Query: 148 GGLIQMGCVFQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVN 207
G + + C Q + + W F+G A ++ + HF+
Sbjct: 514 GESVILPCQVQHDPLLDII-FTWYFNGALA----------------DFKKDGSHFEK--- 553
Query: 208 LVGDIFRNDGSIMLQGVRESDGGNYTCSIHLG--NLVFKKTIVLHVSPEEPRTL 259
VG + G +M++ ++ G Y C + G ++ +++ SP P +
Sbjct: 554 -VGG--SSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV 604
>gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]
Length = 416
Score = 43.1 bits (100), Expect = 4e-04
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 19/123 (15%)
Query: 20 LNDLNVSPPELTVH--VGDSALMGCVFQSTE-DKCIFKIDWTLSPGEHAKDEYVLYYYSN 76
L +N++ P +H VG SAL+ + ST D+ + K W L +D+ V S
Sbjct: 31 LEGVNITSPVRLIHGTVGKSALLSVQYSSTSSDRPVVK--WQLK-----RDKPVTVVQSI 83
Query: 77 LSVPIGR----FQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVV 132
+ IG +++R+ L +GSLLL D+Q AD+GTY EI + ++ +K +
Sbjct: 84 GTEVIGTLRPDYRDRIRLF-----ENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTIN 138
Query: 133 LHV 135
L V
Sbjct: 139 LTV 141
>gi|62865874 immunoglobulin superfamily, member 11 isoform a [Homo
sapiens]
Length = 430
Score = 42.7 bits (99), Expect = 6e-04
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 22 DLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLSPGEHAK--DEYVLYYYSNLSV 79
+++ SP + V G A++ C F ++ + W ++P +A ++ +LY +
Sbjct: 23 EVSESPGSIQVARGQPAVLPCTFTTSAALINLNVIWMVTPLSNANQPEQVILYQGGQMFD 82
Query: 80 PIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYIC 116
RF RV G + + S+ + + Q +D GTY C
Sbjct: 83 GAPRFHGRVGFTGTMPATNVSIFINNTQLSDTGTYQC 119
>gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens]
Length = 319
Score = 40.8 bits (94), Expect = 0.002
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 23 LNVSPPE--LTVHVGDSALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVP 80
++V P+ L G S + C + ++ I W H + V++ +SN +
Sbjct: 22 ISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHT-ERVVIWPFSNKNYI 80
Query: 81 IGR-FQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKA---VVLHVL 136
G ++NRV + + +D S+ + + AD GTY C + L + + K+ +++ V
Sbjct: 81 HGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVP 140
Query: 137 PEEPK---ELMVHVGGLIQMGCVFQSTEVKHVTKVEW 170
P +P+ E +G IQ+ C QS E + W
Sbjct: 141 PSKPECGIEGETIIGNNIQLTC--QSKEGSPTPQYSW 175
Score = 34.3 bits (77), Expect = 0.20
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 202 FQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHL-----GNLVFKKTIVLHVSPEEP 256
++NRV++ + ++D SI + + +D G Y CS+ L GN + +++ V P +P
Sbjct: 85 YKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKP 144
>gi|21361429 V-set and immunoglobulin domain containing 2 [Homo
sapiens]
Length = 327
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 22 DLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWT-LSPGEHAKDEYVLYYYSNLSV- 79
++ V L+ +G +A + C + ST F ++W+ + PG+ + + + Y++N +
Sbjct: 25 EVKVPTEPLSTPLGKTAELTCTY-STSVGDSFALEWSFVQPGKPISESHPILYFTNGHLY 83
Query: 80 PIGRFQNRVHLMGDI-LCNDGSLLLQDVQEADQGTYICEI 118
P G RV L+ + +L L DV +D GTY+C++
Sbjct: 84 PTGSKSKRVSLLQNPPTVGVATLKLTDVHPSDTGTYLCQV 123
>gi|9055238 voltage-gated sodium channel beta-3 subunit precursor
[Homo sapiens]
Length = 215
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 126 VFKKAVVLHVLPEEPKELMVHVGGLIQMGCV--FQSTEVKHVTKVEWIFSGRRAKEEIVF 183
++ +V V E P E G +++ C+ + EV+ T VEW + K+ +++
Sbjct: 16 IYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRPEGGKDFLIY 75
Query: 184 RYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSI 236
Y + + + FQ R+ G D SI + V +D G YTC++
Sbjct: 76 EYRNG------HQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNV 122
Score = 29.3 bits (64), Expect = 6.5
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 27 PPELTVHVGDSALMGCV--FQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPI-GR 83
P E G+ + C+ + E + ++W P E KD +++Y Y N +
Sbjct: 30 PSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRP-EGGKD-FLIYEYRNGHQEVESP 87
Query: 84 FQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAV 131
FQ R+ G D S+ + +V D G Y C + + E + + V
Sbjct: 88 FQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVSREFEFEAHRPFV 135
>gi|93587332 voltage-gated sodium channel beta-3 subunit precursor
[Homo sapiens]
Length = 215
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 126 VFKKAVVLHVLPEEPKELMVHVGGLIQMGCV--FQSTEVKHVTKVEWIFSGRRAKEEIVF 183
++ +V V E P E G +++ C+ + EV+ T VEW + K+ +++
Sbjct: 16 IYWVSVCFPVCVEVPSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRPEGGKDFLIY 75
Query: 184 RYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSI 236
Y + + + FQ R+ G D SI + V +D G YTC++
Sbjct: 76 EYRNG------HQEVESPFQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNV 122
Score = 29.3 bits (64), Expect = 6.5
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 27 PPELTVHVGDSALMGCV--FQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPI-GR 83
P E G+ + C+ + E + ++W P E KD +++Y Y N +
Sbjct: 30 PSETEAVQGNPMKLRCISCMKREEVEATTVVEWFYRP-EGGKD-FLIYEYRNGHQEVESP 87
Query: 84 FQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAV 131
FQ R+ G D S+ + +V D G Y C + + E + + V
Sbjct: 88 FQGRLQWNGSKDLQDVSITVLNVTLNDSGLYTCNVSREFEFEAHRPFV 135
>gi|11386199 poliovirus receptor-related 3 [Homo sapiens]
Length = 549
Score = 40.4 bits (93), Expect = 0.003
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 4 PLKLILLPVLLDYSL--GLNDLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLSP 61
PL L+L P+LL L L + P +T G + + C+ + E I +I W
Sbjct: 38 PLLLLLFPLLLFSRLCGALAGPIIVEPHVTAVWGKNVSLKCLIEVNET--ITQISWEKIH 95
Query: 62 GEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICE 117
G+ ++ V + SV G +Q RV L + ND ++ L ++ +D G YIC+
Sbjct: 96 GKSSQTVAVHHPQYGFSVQ-GEYQGRV-LFKNYSLNDATITLHNIGFSDSGKYICK 149
Score = 35.4 bits (80), Expect = 0.090
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 16/137 (11%)
Query: 148 GGLIQMGCVFQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVN 207
G + + C+ + E +T++ W ++ + + ++ + SV+ G +Q RV
Sbjct: 71 GKNVSLKCLIEVNET--ITQISWEKIHGKSSQTVAV-HHPQYGFSVQ-----GEYQGRV- 121
Query: 208 LVGDIFRNDGSIMLQGVRESDGGNYTC---SIHLGNLVFKKTIVLHVSPEEPRTLVTPAA 264
L + ND +I L + SD G Y C + LGN T+ + V P T+
Sbjct: 122 LFKNYSLNDATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEP----TVSLIKG 177
Query: 265 LRPLVLGGNQLVIIVGI 281
L+ GGN+ V + I
Sbjct: 178 PDSLIDGGNETVAAICI 194
>gi|58331253 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform a [Homo sapiens]
Length = 6620
Score = 39.3 bits (90), Expect = 0.006
Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 36/181 (19%)
Query: 101 LLLQDVQEADQGTYICEI---RLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCVF 157
L++Q+ +AD G Y C+ RL V + VV +E+ G + C
Sbjct: 1591 LVVQEAGQADAGEYSCKAGDQRLSFHLHVAEPKVVFAKEQPAHREVQAEAGASATLSCEV 1650
Query: 158 QSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDG 217
+ T+V W G+ KL S + RV VG R
Sbjct: 1651 AQAQ----TEVTWYKDGK------------KLSSSSKV---------RVEAVGCTRR--- 1682
Query: 218 SIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLVI 277
+++Q ++D G Y+C L F+ LHV+ EP+ P PLV+ ++ +I
Sbjct: 1683 -LVVQQAGQADAGEYSCEAGGQRLSFR----LHVAELEPQISERPCRREPLVVKEHEDII 1737
Query: 278 I 278
+
Sbjct: 1738 L 1738
Score = 30.4 bits (67), Expect = 2.9
Identities = 46/222 (20%), Positives = 79/222 (35%), Gaps = 51/222 (22%)
Query: 47 TEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC------NDGS 100
TE +F + T + +D ++ S +P+ ++ L G C +
Sbjct: 3092 TEKPSVFSRELTDATITEGEDLTLVCETSTCDIPVCWTKDGKTLRGSARCQLSHEGHRAQ 3151
Query: 101 LLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLP----EEPKELMVHVGGLIQMGCV 156
LL+ D G Y CE S + + +H P E K+L V GG + CV
Sbjct: 3152 LLITGATLQDSGRYKCEAGGACSSSIVR----VHARPVRFQEALKDLEVLEGGAATLRCV 3207
Query: 157 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRND 216
S V+W + + LR +YS R +
Sbjct: 3208 LSSV----AAPVKWCYGN------------NVLRPGDKYS----------------LRQE 3235
Query: 217 GSIM---LQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEE 255
G+++ ++ +R D G Y+CS G+ T+ + P +
Sbjct: 3236 GAMLELVVRNLRPQDSGRYSCS--FGDQTTSATLTVTALPAQ 3275
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 39.3 bits (90), Expect = 0.006
Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 36/181 (19%)
Query: 101 LLLQDVQEADQGTYICEI---RLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCVF 157
L++Q+ +AD G Y C+ RL V + VV +E+ G + C
Sbjct: 1591 LVVQEAGQADAGEYSCKAGDQRLSFHLHVAEPKVVFAKEQPAHREVQAEAGASATLSCEV 1650
Query: 158 QSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDG 217
+ T+V W G+ KL S + RV VG R
Sbjct: 1651 AQAQ----TEVTWYKDGK------------KLSSSSKV---------RVEAVGCTRR--- 1682
Query: 218 SIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLVI 277
+++Q ++D G Y+C L F+ LHV+ EP+ P PLV+ ++ +I
Sbjct: 1683 -LVVQQAGQADAGEYSCEAGGQRLSFR----LHVAELEPQISERPCRREPLVVKEHEDII 1737
Query: 278 I 278
+
Sbjct: 1738 L 1738
Score = 30.4 bits (67), Expect = 2.9
Identities = 46/222 (20%), Positives = 79/222 (35%), Gaps = 51/222 (22%)
Query: 47 TEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC------NDGS 100
TE +F + T + +D ++ S +P+ ++ L G C +
Sbjct: 3092 TEKPSVFSRELTDATITEGEDLTLVCETSTCDIPVCWTKDGKTLRGSARCQLSHEGHRAQ 3151
Query: 101 LLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLP----EEPKELMVHVGGLIQMGCV 156
LL+ D G Y CE S + + +H P E K+L V GG + CV
Sbjct: 3152 LLITGATLQDSGRYKCEAGGACSSSIVR----VHARPVRFQEALKDLEVLEGGAATLRCV 3207
Query: 157 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRND 216
S V+W + + LR +YS R +
Sbjct: 3208 LSSV----AAPVKWCYGN------------NVLRPGDKYS----------------LRQE 3235
Query: 217 GSIM---LQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEE 255
G+++ ++ +R D G Y+CS G+ T+ + P +
Sbjct: 3236 GAMLELVVRNLRPQDSGRYSCS--FGDQTTSATLTVTALPAQ 3275
>gi|28372555 sodium channel, voltage-gated, type IV, beta isoform 1
precursor [Homo sapiens]
Length = 228
Score = 38.9 bits (89), Expect = 0.008
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 204 NRVNLVGDIFR--NDGSIMLQGVRESDGGNYTCSI---HLGNLVFKKTIVLHVSPEEPRT 258
+R+ LVG N+ SI+L+ + SD G YTC + NL TI L V
Sbjct: 99 DRITLVGSTKEKMNNISIVLRDLEFSDTGKYTCHVKNPKENNLQHHATIFLQVVDRLEEV 158
Query: 259 LVTPAALRPLVLGGNQLVIIVGIVCATILLLPVLILIVKKTCGNKSSVNSTVLVKNTKKT 318
T + V+GG ++G++ +L+ ++I I+KKT K LV ++
Sbjct: 159 DNTVTLIILAVVGG-----VIGLLILILLIKKLIIFILKKTREKKKE----CLVSSSGND 209
Query: 319 NPE 321
N E
Sbjct: 210 NTE 212
Score = 30.4 bits (67), Expect = 2.9
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 18/160 (11%)
Query: 5 LKLILLPVLLDYSLGLNDLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLSPGEH 64
L L LLPV L + + ++ G L+ C F S WT + +
Sbjct: 20 LGLFLLPVTLSLEVSVGKAT----DIYAVNGTEILLPCTFSSCFGFEDLHFRWTYNSSDA 75
Query: 65 AK---DEYVLYYYSNLSVPIGRFQNRVHLMGDIL--CNDGSLLLQDVQEADQGTYICEIR 119
K + V S+ V + + +R+ L+G N+ S++L+D++ +D G Y C ++
Sbjct: 76 FKILIEGTVKNEKSDPKVTL-KDDDRITLVGSTKEKMNNISIVLRDLEFSDTGKYTCHVK 134
Query: 120 LKGESQVFKKAVVLHVLPEEPKE--------LMVHVGGLI 151
E+ + A + + + +E ++ VGG+I
Sbjct: 135 NPKENNLQHHATIFLQVVDRLEEVDNTVTLIILAVVGGVI 174
>gi|32699028 V-set and immunoglobulin domain containing 1 [Homo
sapiens]
Length = 387
Score = 38.9 bits (89), Expect = 0.008
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 1 MFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGDSALMGCVFQST-EDKCIFKIDWTL 59
+F K+ L+ L + + + + + V VG + + C++ +T + I W+
Sbjct: 2 VFAFWKVFLILSCLAGQVSVVQVTIPDGFVNVTVGSNVTLICIYTTTVASREQLSIQWSF 61
Query: 60 SPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIR 119
+ + + + +V IG+F++R+ D + S+ + +Q AD G YIC++
Sbjct: 62 FHKKEMEPISIYFSQGGQAVAIGQFKDRITGSNDP--GNASITISHMQPADSGIYICDVN 119
Query: 120 ----LKGESQVFKKAVVLHVLPEEP 140
G++Q VL V P +P
Sbjct: 120 NPPDFLGQNQGILNVSVL-VKPSKP 143
>gi|94538343 sialic acid binding Ig-like lectin 8 [Homo sapiens]
Length = 499
Score = 38.1 bits (87), Expect = 0.014
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 203 QNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTP 262
Q R L+GDI+ ND S+ ++ R+ D G+Y + G++ + L+ ++ VT
Sbjct: 93 QGRFQLLGDIWSNDCSLSIRDARKRDKGSYFFRLERGSMKWSYKSQLNYKTKQLSVFVTA 152
Query: 263 AALRP--LVLG 271
RP L+LG
Sbjct: 153 LTHRPDILILG 163
Score = 33.1 bits (74), Expect = 0.45
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 85 QNRVHLMGDILCNDGSLLLQDVQEADQGTY 114
Q R L+GDI ND SL ++D ++ D+G+Y
Sbjct: 93 QGRFQLLGDIWSNDCSLSIRDARKRDKGSY 122
>gi|7657232 interleukin 1 receptor accessory protein-like 1
precursor [Homo sapiens]
Length = 696
Score = 38.1 bits (87), Expect = 0.014
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 212 IFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPL 268
+F+ D +++++ VRE D GNYTC + G V ++T L V+ P T P L P+
Sbjct: 195 VFKRD-TLLIREVREDDIGNYTCELKYGGFVVRRTTELTVT--APLTDKPPKLLYPM 248
Score = 33.1 bits (74), Expect = 0.45
Identities = 33/157 (21%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 100 SLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHV---LPEEPKELMVHVGGLIQMGCV 156
+LL+++V+E D G Y CE++ G V ++ L V L ++P +L+ + + +
Sbjct: 200 TLLIREVREDDIGNYTCELKYGGF--VVRRTTELTVTAPLTDKPPKLLYPMESKLTIQET 257
Query: 157 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRND 216
+ + +SG I + K ++ ++ W ++ + ++ +
Sbjct: 258 QLGDSANLTCRAFFGYSGD-VSPLIYWMKGEKFIEDLDENRVW---ESDIRILKEHLGEQ 313
Query: 217 G---SIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLH 250
S+++ V E D GNY+C + GN +++LH
Sbjct: 314 EVSISLIVDSVEEGDLGNYSCYVENGNGRRHASVLLH 350
>gi|63054855 erythroblast membrane-associated protein precursor
[Homo sapiens]
Length = 475
Score = 38.1 bits (87), Expect = 0.014
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 202 FQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVT 261
++ R LV D ++ + VR D G+Y C I +GNL + T++L V+ +L
Sbjct: 94 YKGRTVLVRDAQEGSVTLQILDVRLEDQGSYRCLIQVGNLSKEDTVILQVAAPSVGSLSP 153
Query: 262 PAALRPLVLGGNQLVIIVGIVCATIL 287
A ++L +++++ +VC ++
Sbjct: 154 SAVALAVIL---PVLVLLIMVCLCLI 176
>gi|19923536 erythroblast membrane-associated protein precursor
[Homo sapiens]
Length = 475
Score = 38.1 bits (87), Expect = 0.014
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 202 FQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVT 261
++ R LV D ++ + VR D G+Y C I +GNL + T++L V+ +L
Sbjct: 94 YKGRTVLVRDAQEGSVTLQILDVRLEDQGSYRCLIQVGNLSKEDTVILQVAAPSVGSLSP 153
Query: 262 PAALRPLVLGGNQLVIIVGIVCATIL 287
A ++L +++++ +VC ++
Sbjct: 154 SAVALAVIL---PVLVLLIMVCLCLI 176
>gi|31542244 leucine rich repeat and fibronectin type III domain
containing 5 [Homo sapiens]
Length = 719
Score = 37.4 bits (85), Expect = 0.024
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 18/135 (13%)
Query: 270 LGGNQLVIIVGIVCATILLLPVLILIVKKTCGNKSSVNSTVLVKNTKKTN---------- 319
LGG ++II GI+ A++L+ ++++I K C N T + +TN
Sbjct: 525 LGGTMIIIIGGIIVASVLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQIQGCSVT 584
Query: 320 -PEIKEKPC--HFERCEGEKHIYSPIIVREVIEEEEPSEKSEATYMTMHPVWPSLRSDRN 376
P+ K H E + K +I E S+ S T + P W S S
Sbjct: 585 LPQSVSKQAVGHEENAQCCKATSDNVIQS---SETCSSQDSSTTTSALPPSWTS--STSV 639
Query: 377 NSLEKKSGGGMPKTQ 391
+ +K+ G P T+
Sbjct: 640 SQKQKRKTGTKPSTE 654
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,662,206
Number of Sequences: 37866
Number of extensions: 706808
Number of successful extensions: 2999
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 2482
Number of HSP's gapped (non-prelim): 595
length of query: 394
length of database: 18,247,518
effective HSP length: 104
effective length of query: 290
effective length of database: 14,309,454
effective search space: 4149741660
effective search space used: 4149741660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.