GJB1 4380

Name: GJB1	Sequence: fasta or formatted (283aa)		NCBI GI: 148233402
Description: gap junction protein, beta 1, 32kDa		Referenced in: Gap Junctions and Tight Junctions
Other entries for this name: alt mRNA [283aa] gap junction protein, beta 1, 32kDa
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 17 2 C cysteine 3.5 10 1 D aspartate 2.8 8 1 E glutamate 4.6 13 2 F phenylalanine 4.6 13 2 G glycine 6.0 17 1 H histidine 3.5 10 1 I isoleucine 6.0 17 2 K lysine 4.2 12 2 L leucine 11.0 31 2 M methionine 2.5 7 1 N asparagine 3.2 9 1 P proline 4.2 12 2 Q glutamine 2.8 8 2 R arginine 6.7 19 2 S serine 8.1 23 2 T threonine 4.2 12 1 V valine 10.2 29 2 W tryptophan 2.1 6 2 Y tyrosine 3.5 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 gap junction protein, beta 1, 32kDa GJB1 1.000 gap junction protein, beta 1, 32kDa GJB6 0.535 gap junction protein, beta 6 GJB6 0.535 gap junction protein, beta 6 GJB6 0.535 gap junction protein, beta 6 GJB6 0.535 gap junction protein, beta 6 GJB2 0.535 gap junction protein beta 2 GJB4 0.427 gap junction protein, beta 4 GJB5 0.413 gap junction protein, beta 5, 31.1kDa GJB3 0.404 connexin 31 GJB3 0.404 connexin 31 GJB7 0.373 gap junction protein, beta 7, 25kDa GJA8 0.348 connexin 50 GJA3 0.342 connexin 46 GJA1 0.328 connexin 43 GJA4 0.326 connexin 37 GJA10 0.323 gap junction protein, alpha 10 GJA9 0.301 gap junction protein, alpha 9, 59kDa GJA5 0.297 connexin 40 GJA5 0.297 connexin 40 GJC1 0.263 connexin 45 GJC1 0.263 connexin 45 GJD3 0.232 gap junction protein, delta 3, 31.9kDa GJD4 0.211 connexin40.1 GJC3 0.182 gap junction protein, gamma 3, 30.2kDa GJC2 0.160 gap junction protein, gamma 2, 47kDa GJD2 0.159 gap junction protein, delta 2, 36kDa LOC100128334 0.110 PREDICTED: similar to hCG1770601 LOC100128334 0.110 PREDICTED: similar to hCG1770601 LOC100128334 0.110 PREDICTED: similar to hCG1770601 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.