GJD4 4135

Name: GJD4	Sequence: fasta or formatted (370aa)		NCBI GI: 145699105
Description: connexin40.1		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 32 2 C cysteine 3.2 12 1 D aspartate 3.2 12 1 E glutamate 5.9 22 3 F phenylalanine 4.1 15 1 G glycine 9.5 35 2 H histidine 2.2 8 1 I isoleucine 2.2 8 2 K lysine 2.2 8 2 L leucine 11.1 41 3 M methionine 1.6 6 1 N asparagine 1.1 4 1 P proline 10.0 37 2 Q glutamine 3.0 11 1 R arginine 10.0 37 3 S serine 8.9 33 3 T threonine 3.8 14 1 V valine 6.8 25 2 W tryptophan 1.1 4 1 Y tyrosine 1.6 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 connexin40.1 GJA10 0.177 gap junction protein, alpha 10 GJC2 0.176 gap junction protein, gamma 2, 47kDa GJD3 0.174 gap junction protein, delta 3, 31.9kDa GJA3 0.174 connexin 46 GJA8 0.165 connexin 50 GJA4 0.163 connexin 37 GJA5 0.162 connexin 40 GJA5 0.162 connexin 40 GJB1 0.159 gap junction protein, beta 1, 32kDa GJB1 0.159 gap junction protein, beta 1, 32kDa GJC1 0.159 connexin 45 GJC1 0.159 connexin 45 GJA9 0.157 gap junction protein, alpha 9, 59kDa GJB6 0.150 gap junction protein, beta 6 GJB6 0.150 gap junction protein, beta 6 GJB6 0.150 gap junction protein, beta 6 GJB6 0.150 gap junction protein, beta 6 GJB2 0.144 gap junction protein beta 2 GJA1 0.143 connexin 43 GJB4 0.138 gap junction protein, beta 4 GJB5 0.138 gap junction protein, beta 5, 31.1kDa GJB7 0.132 gap junction protein, beta 7, 25kDa GJC3 0.132 gap junction protein, gamma 3, 30.2kDa GJB3 0.132 connexin 31 GJB3 0.132 connexin 31 GJD2 0.091 gap junction protein, delta 2, 36kDa LOC100128334 0.082 PREDICTED: similar to hCG1770601 LOC100128334 0.082 PREDICTED: similar to hCG1770601 LOC100128334 0.082 PREDICTED: similar to hCG1770601 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.