GJD2 67

Name: GJD2	Sequence: fasta or formatted (321aa)		NCBI GI: 10190698
Description: gap junction protein, delta 2, 36kDa		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 16 2 C cysteine 3.1 10 1 D aspartate 2.8 9 2 E glutamate 6.5 21 1 F phenylalanine 4.7 15 1 G glycine 8.1 26 4 H histidine 1.6 5 1 I isoleucine 7.2 23 2 K lysine 4.7 15 2 L leucine 8.4 27 2 M methionine 1.6 5 1 N asparagine 3.7 12 1 P proline 4.4 14 2 Q glutamine 4.7 15 2 R arginine 7.2 23 2 S serine 6.5 21 2 T threonine 5.6 18 1 V valine 9.3 30 3 W tryptophan 0.9 3 1 Y tyrosine 4.0 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 gap junction protein, delta 2, 36kDa GJC2 0.315 gap junction protein, gamma 2, 47kDa GJA8 0.312 connexin 50 GJC1 0.309 connexin 45 GJC1 0.309 connexin 45 GJA3 0.304 connexin 46 GJA5 0.282 connexin 40 GJA5 0.282 connexin 40 GJA10 0.274 gap junction protein, alpha 10 GJA4 0.267 connexin 37 GJA9 0.264 gap junction protein, alpha 9, 59kDa GJA1 0.254 connexin 43 GJB6 0.205 gap junction protein, beta 6 GJB6 0.205 gap junction protein, beta 6 GJB6 0.205 gap junction protein, beta 6 GJB6 0.205 gap junction protein, beta 6 GJC3 0.184 gap junction protein, gamma 3, 30.2kDa GJD3 0.168 gap junction protein, delta 3, 31.9kDa GJB1 0.141 gap junction protein, beta 1, 32kDa GJB1 0.141 gap junction protein, beta 1, 32kDa GJB2 0.131 gap junction protein beta 2 GJB4 0.131 gap junction protein, beta 4 GJB3 0.123 connexin 31 GJB3 0.123 connexin 31 GJB5 0.120 gap junction protein, beta 5, 31.1kDa LOC100128334 0.110 PREDICTED: similar to hCG1770601 LOC100128334 0.110 PREDICTED: similar to hCG1770601 LOC100128334 0.110 PREDICTED: similar to hCG1770601 LOC100128334 0.110 PREDICTED: similar to hCG1770601 GJB7 0.110 gap junction protein, beta 7, 25kDa Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.