GJB4 15915

Name: GJB4	Sequence: fasta or formatted (266aa)		NCBI GI: 23397464
Description: gap junction protein, beta 4		Referenced in: Gap Junctions and Tight Junctions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 15 2 C cysteine 4.5 12 1 D aspartate 4.5 12 2 E glutamate 4.9 13 2 F phenylalanine 4.9 13 2 G glycine 5.6 15 2 H histidine 3.4 9 2 I isoleucine 3.4 9 1 K lysine 4.9 13 2 L leucine 10.5 28 2 M methionine 2.3 6 1 N asparagine 3.0 8 1 P proline 6.8 18 2 Q glutamine 1.9 5 1 R arginine 6.0 16 2 S serine 5.6 15 1 T threonine 3.8 10 2 V valine 10.9 29 2 W tryptophan 2.3 6 2 Y tyrosine 5.3 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 gap junction protein, beta 4 GJB5 0.572 gap junction protein, beta 5, 31.1kDa GJB3 0.544 connexin 31 GJB3 0.544 connexin 31 GJB1 0.439 gap junction protein, beta 1, 32kDa GJB1 0.439 gap junction protein, beta 1, 32kDa GJB7 0.439 gap junction protein, beta 7, 25kDa GJB6 0.430 gap junction protein, beta 6 GJB6 0.430 gap junction protein, beta 6 GJB6 0.430 gap junction protein, beta 6 GJB6 0.430 gap junction protein, beta 6 GJB2 0.426 gap junction protein beta 2 GJA3 0.320 connexin 46 GJA8 0.313 connexin 50 GJA4 0.313 connexin 37 GJA1 0.302 connexin 43 GJA10 0.302 gap junction protein, alpha 10 GJA5 0.294 connexin 40 GJA5 0.294 connexin 40 GJA9 0.274 gap junction protein, alpha 9, 59kDa GJC1 0.241 connexin 45 GJC1 0.241 connexin 45 GJD3 0.230 gap junction protein, delta 3, 31.9kDa GJD4 0.187 connexin40.1 GJC3 0.169 gap junction protein, gamma 3, 30.2kDa GJC2 0.169 gap junction protein, gamma 2, 47kDa GJD2 0.152 gap junction protein, delta 2, 36kDa LOC100128334 0.093 PREDICTED: similar to hCG1770601 LOC100128334 0.093 PREDICTED: similar to hCG1770601 LOC100128334 0.093 PREDICTED: similar to hCG1770601 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.