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Search of human proteins with 14602431
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14602431 serine/threonine kinase 19 isoform 2 [Homo sapiens]
(368 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14602431 serine/threonine kinase 19 isoform 2 [Homo sapiens] 752 0.0
gi|4759180 serine/threonine kinase 19 isoform 1 [Homo sapiens] 736 0.0
gi|239740792 PREDICTED: similar to serine/threonine kinase 19 [H... 133 3e-31
gi|169208912 PREDICTED: hypothetical protein [Homo sapiens] 32 0.69
gi|169208667 PREDICTED: hypothetical protein [Homo sapiens] 32 0.69
gi|169208084 PREDICTED: hypothetical protein [Homo sapiens] 32 0.69
gi|116174742 family with sequence similarity 20, member C [Homo ... 32 0.69
gi|27363480 hypothetical protein LOC55262 [Homo sapiens] 32 0.69
gi|119220552 sidekick 1 [Homo sapiens] 32 0.91
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 32 1.2
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 32 1.2
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 32 1.2
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 32 1.2
gi|62865604 tripartite motif protein 31 [Homo sapiens] 31 1.5
gi|225637475 solute carrier organic anion transporter family, me... 31 2.0
gi|23510400 pantothenate kinase 1 isoform alpha [Homo sapiens] 31 2.0
gi|133908631 SWI/SNF-related matrix-associated actin-dependent r... 31 2.0
gi|133908629 SWI/SNF-related matrix-associated actin-dependent r... 31 2.0
gi|239747236 PREDICTED: leucine rich repeat containing 38 [Homo ... 30 2.6
gi|239741057 PREDICTED: leucine rich repeat containing 38 [Homo ... 30 2.6
gi|194363768 homeobox D9 [Homo sapiens] 30 3.4
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 30 3.4
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 30 3.4
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 30 3.4
gi|61966701 dorsal neural-tube nuclear protein [Homo sapiens] 30 4.5
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c... 29 5.9
gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca... 29 5.9
gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo ... 29 5.9
gi|169183786 PREDICTED: hypothetical protein [Homo sapiens] 29 5.9
gi|239754889 PREDICTED: similar to hCG2036697 [Homo sapiens] 29 5.9
>gi|14602431 serine/threonine kinase 19 isoform 2 [Homo sapiens]
Length = 368
Score = 752 bits (1942), Expect = 0.0
Identities = 368/368 (100%), Positives = 368/368 (100%)
Query: 1 MQKWFSAFDDAIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPI 60
MQKWFSAFDDAIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPI
Sbjct: 1 MQKWFSAFDDAIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPI 60
Query: 61 RGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIP 120
RGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIP
Sbjct: 61 RGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIP 120
Query: 121 ETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVP 180
ETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVP
Sbjct: 121 ETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVP 180
Query: 181 DRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTEDYRTRVCDCVLKACDGRPYAGAVQ 240
DRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTEDYRTRVCDCVLKACDGRPYAGAVQ
Sbjct: 181 DRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTEDYRTRVCDCVLKACDGRPYAGAVQ 240
Query: 241 KFLASVLPACGDLSFQQDQMTQTFGFRDSEITHLVNAGVLTVRDAGSWWLAVPGAGRFIK 300
KFLASVLPACGDLSFQQDQMTQTFGFRDSEITHLVNAGVLTVRDAGSWWLAVPGAGRFIK
Sbjct: 241 KFLASVLPACGDLSFQQDQMTQTFGFRDSEITHLVNAGVLTVRDAGSWWLAVPGAGRFIK 300
Query: 301 YFVKGRQAVLSMVRKAKYRELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTSG 360
YFVKGRQAVLSMVRKAKYRELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTSG
Sbjct: 301 YFVKGRQAVLSMVRKAKYRELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTSG 360
Query: 361 TLLRLPET 368
TLLRLPET
Sbjct: 361 TLLRLPET 368
>gi|4759180 serine/threonine kinase 19 isoform 1 [Homo sapiens]
Length = 364
Score = 736 bits (1899), Expect = 0.0
Identities = 364/368 (98%), Positives = 364/368 (98%), Gaps = 4/368 (1%)
Query: 1 MQKWFSAFDDAIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPI 60
MQKWFSAFDDAIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPI
Sbjct: 1 MQKWFSAFDDAIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPI 60
Query: 61 RGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIP 120
RGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIP
Sbjct: 61 RGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIP 120
Query: 121 ETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVP 180
ETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVP
Sbjct: 121 ETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVP 180
Query: 181 DRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTEDYRTRVCDCVLKACDGRPYAGAVQ 240
DRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTEDYRTR VLKACDGRPYAGAVQ
Sbjct: 181 DRTVADRQLKELQEQGEIRIVQLGFDLDAHGIIFTEDYRTR----VLKACDGRPYAGAVQ 236
Query: 241 KFLASVLPACGDLSFQQDQMTQTFGFRDSEITHLVNAGVLTVRDAGSWWLAVPGAGRFIK 300
KFLASVLPACGDLSFQQDQMTQTFGFRDSEITHLVNAGVLTVRDAGSWWLAVPGAGRFIK
Sbjct: 237 KFLASVLPACGDLSFQQDQMTQTFGFRDSEITHLVNAGVLTVRDAGSWWLAVPGAGRFIK 296
Query: 301 YFVKGRQAVLSMVRKAKYRELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTSG 360
YFVKGRQAVLSMVRKAKYRELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTSG
Sbjct: 297 YFVKGRQAVLSMVRKAKYRELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTSG 356
Query: 361 TLLRLPET 368
TLLRLPET
Sbjct: 357 TLLRLPET 364
>gi|239740792 PREDICTED: similar to serine/threonine kinase 19 [Homo
sapiens]
Length = 71
Score = 133 bits (334), Expect = 3e-31
Identities = 67/69 (97%), Positives = 67/69 (97%)
Query: 300 KYFVKGRQAVLSMVRKAKYRELLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTS 359
KYFVKGRQAVL MVRKAKYRELLLSELLGRR PVVVRLGLTYHVHDLIGAQLVDCISTTS
Sbjct: 3 KYFVKGRQAVLGMVRKAKYRELLLSELLGRRVPVVVRLGLTYHVHDLIGAQLVDCISTTS 62
Query: 360 GTLLRLPET 368
GTLLRLPET
Sbjct: 63 GTLLRLPET 71
>gi|169208912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 32.3 bits (72), Expect = 0.69
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 43 PPRRQRVPGRACPWREPIRGRRGARPGGGDAGGTPGETVRHCSA 86
PP PG PWR RG G P GG+AGG G C++
Sbjct: 40 PPAGPGAPG--APWR---RGDEGPGPAGGEAGGPCGAAPGGCAS 78
>gi|169208667 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 32.3 bits (72), Expect = 0.69
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 43 PPRRQRVPGRACPWREPIRGRRGARPGGGDAGGTPGETVRHCSA 86
PP PG PWR RG G P GG+AGG G C++
Sbjct: 40 PPAGPGAPG--APWR---RGDEGPGPAGGEAGGPCGAAPGGCAS 78
>gi|169208084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 32.3 bits (72), Expect = 0.69
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 43 PPRRQRVPGRACPWREPIRGRRGARPGGGDAGGTPGETVRHCSA 86
PP PG PWR RG G P GG+AGG G C++
Sbjct: 40 PPAGPGAPG--APWR---RGDEGPGPAGGEAGGPCGAAPGGCAS 78
>gi|116174742 family with sequence similarity 20, member C [Homo
sapiens]
Length = 584
Score = 32.3 bits (72), Expect = 0.69
Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 21/148 (14%)
Query: 53 ACPWREPIRGRRGARPGGGDAGGTPGETVRHC-----SAPEDPIFRFSSLHSY------- 100
A P +RGR G P A G G +H DP SS HS
Sbjct: 56 AAPGWAQVRGRPGEPPAASSAAGDAGWPNKHTLRILQDFSSDPSSNLSS-HSLEKLPPAA 114
Query: 101 -PFPGTIKSRDMSWKRHHLIPETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPR 159
P ++ RD R H + R GP S+ G G A S L +LF
Sbjct: 115 EPAERALRGRDPGALRPH---DPAHRPLLRDPGPRRSESPPGPGGDA----SLLARLFEH 167
Query: 160 GLFEDALPPIVLRSQVYSLVPDRTVADR 187
L+ A+PP+ ++++ D ++ +
Sbjct: 168 PLYRVAVPPLTEEDVLFNVNSDTRLSPK 195
>gi|27363480 hypothetical protein LOC55262 [Homo sapiens]
Length = 580
Score = 32.3 bits (72), Expect = 0.69
Identities = 48/157 (30%), Positives = 63/157 (40%), Gaps = 51/157 (32%)
Query: 68 PGGGDAGGTPGETVRHCSA------------------PEDPIFRFS--------SLHSYP 101
PGGGD GG G R CS E+PI SL P
Sbjct: 105 PGGGDPGG--GGLFRGCSPLLTHGPGPATSGGATTLPVEEPIVSTDEVIFPLTVSLDRLP 162
Query: 102 FPGTIKSRDMS--WKRHHLIPETFG---VKRRRKRGPVESDPLRGEPGSARAAVSELMQL 156
PGT K++ + WKR PE ++ + R P E+ RGE + +A VS L+ L
Sbjct: 163 -PGTPKAKIVVTVWKREIEAPEVRDQGYLRLLQTRSPGET--FRGEQSAFKAQVSTLLTL 219
Query: 157 FPRGLFEDALPPIVLRSQVYSLVPDRTVADRQLKELQ 193
LPP VLR + + TVA + L L+
Sbjct: 220 ---------LPPPVLRCRQF------TVAGKHLTVLK 241
>gi|119220552 sidekick 1 [Homo sapiens]
Length = 2213
Score = 32.0 bits (71), Expect = 0.91
Identities = 18/52 (34%), Positives = 20/52 (38%)
Query: 24 GGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPIRGRRGARPGGGDAGG 75
GGGG + G+PP R R P EP R R GGD G
Sbjct: 13 GGGGAEPPERAGPGRPRGSPPGRARPSLAPRPGPEPSRPRAAPETSGGDTAG 64
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 21 PSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPIRGRRGARPGGGDAGGTPGET 80
P+R G ++ + D A + P RQR RA R RR A PG AG P +
Sbjct: 69 PTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPS 128
Query: 81 -VRHCSAP 87
+ C P
Sbjct: 129 GAQSCGGP 136
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 21 PSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPIRGRRGARPGGGDAGGTPGET 80
P+R G ++ + D A + P RQR RA R RR A PG AG P +
Sbjct: 69 PTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPS 128
Query: 81 -VRHCSAP 87
+ C P
Sbjct: 129 GAQSCGGP 136
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 21 PSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPIRGRRGARPGGGDAGGTPGET 80
P+R G ++ + D A + P RQR RA R RR A PG AG P +
Sbjct: 69 PTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPS 128
Query: 81 -VRHCSAP 87
+ C P
Sbjct: 129 GAQSCGGP 136
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 31.6 bits (70), Expect = 1.2
Identities = 44/145 (30%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 41 GAPPRRQRVPGRACPWRE--PIRGRRGARPGGGDAGG---TPGET-VRHCSAPE------ 88
G+P R +R P R P E P GRRG GG +AG + GE R + PE
Sbjct: 28 GSPGRGRRGP-RPGPGDEAAPALGRRGKGSGGPEAGADGLSRGERGPRRAAVPELSAQPA 86
Query: 89 -DPIFRFSSLHSYPFPGTIKSRDMS--WKRHHLIPETFGVKRRRKRGPVESDPLRGEP-- 143
P + G+ +S +S + + H P + G + P G P
Sbjct: 87 GSPRASLAGSDGGGGGGSARSSGISLGYDQRHGSPRS---------GRSDPRPGPGPPSV 137
Query: 144 GSARAAVSELMQLFPRGLFEDALPP 168
GSAR++VS L G + D LPP
Sbjct: 138 GSARSSVSSLGSRGSAGAYADFLPP 162
>gi|62865604 tripartite motif protein 31 [Homo sapiens]
Length = 425
Score = 31.2 bits (69), Expect = 1.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 66 ARPGGGDAGG--TPGETVRHCSAPEDPIFRFSSLHSYPFP 103
+ PG AGG T G H SAP +FR SS FP
Sbjct: 334 SEPGSSSAGGRTTSGPPNHHSSAPSHSLFRASSAGKVTFP 373
>gi|225637475 solute carrier organic anion transporter family,
member 5A1 isoform 3 [Homo sapiens]
Length = 793
Score = 30.8 bits (68), Expect = 2.0
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 144 GSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVPDRTVADRQLKEL---QEQGEIRI 200
G A++ + +FP F LPP + + D D LKE EQ + ++
Sbjct: 350 GFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKKKFSVDAVSDDDVLKEKSNNSEQADKKV 409
Query: 201 VQLGFDLDAHGII 213
+GF D G+I
Sbjct: 410 SSMGFGKDVRGVI 422
>gi|23510400 pantothenate kinase 1 isoform alpha [Homo sapiens]
Length = 598
Score = 30.8 bits (68), Expect = 2.0
Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 14/83 (16%)
Query: 59 PIRGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHL 118
P RG +GA G AGG VRH P+ P R + G IK+
Sbjct: 69 PARGGQGAEEVGESAGGGEERRVRH---PQAPALRLLNRKPQGGSGEIKT---------- 115
Query: 119 IPETFGVKRRRKRGPVESDPLRG 141
PE + R RGP + P G
Sbjct: 116 -PENDLQRGRLSRGPRTAPPAPG 137
>gi|133908631 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin d1 isoform b [Homo sapiens]
Length = 474
Score = 30.8 bits (68), Expect = 2.0
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 10/130 (7%)
Query: 62 GRRGARPGGGDA-----GGTPGETVRHCSAPEDPIFRFSSL-HSYPFPGTIKSRDMSWKR 115
G GA G G A GGTPG VR AP ++R +YP PG + M+ +
Sbjct: 14 GGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPRPGMLPGSRMTPQG 73
Query: 116 HHLIPETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDA----LPPIVL 171
+ P +G + G +S + A + ++ Q + +A + +L
Sbjct: 74 PSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKIL 133
Query: 172 RSQVYSLVPD 181
++ LVP+
Sbjct: 134 PQRIRELVPE 143
>gi|133908629 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin d1 isoform a [Homo sapiens]
Length = 515
Score = 30.8 bits (68), Expect = 2.0
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 10/130 (7%)
Query: 62 GRRGARPGGGDA-----GGTPGETVRHCSAPEDPIFRFSSL-HSYPFPGTIKSRDMSWKR 115
G GA G G A GGTPG VR AP ++R +YP PG + M+ +
Sbjct: 14 GGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPRPGMLPGSRMTPQG 73
Query: 116 HHLIPETFGVKRRRKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDA----LPPIVL 171
+ P +G + G +S + A + ++ Q + +A + +L
Sbjct: 74 PSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKIL 133
Query: 172 RSQVYSLVPD 181
++ LVP+
Sbjct: 134 PQRIRELVPE 143
>gi|239747236 PREDICTED: leucine rich repeat containing 38 [Homo
sapiens]
Length = 408
Score = 30.4 bits (67), Expect = 2.6
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 42 APPRRQRVPGRACP----WREPIRGRRGARPGGGDAGGTP 77
AP RQ VP RA P REP+ RRG R G A +P
Sbjct: 81 APRARQPVPHRAVPRQGSLREPLPSRRGRRGPPGHAPPSP 120
>gi|239741057 PREDICTED: leucine rich repeat containing 38 [Homo
sapiens]
Length = 408
Score = 30.4 bits (67), Expect = 2.6
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 42 APPRRQRVPGRACP----WREPIRGRRGARPGGGDAGGTP 77
AP RQ VP RA P REP+ RRG R G A +P
Sbjct: 81 APRARQPVPHRAVPRQGSLREPLPSRRGRRGPPGHAPPSP 120
>gi|194363768 homeobox D9 [Homo sapiens]
Length = 352
Score = 30.0 bits (66), Expect = 3.4
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 11 AIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRAC-PWREPIRG-RRGARP 68
A+ W A PS+ + + V PGR W EP+ G GA
Sbjct: 73 AVFSASWSAVPSQPPAAAAMSGLYHPYVPPPPLAASASEPGRYVRSWMEPLPGFPGGAGG 132
Query: 69 GGGDAGGTPG 78
GGG GG PG
Sbjct: 133 GGGGGGGGPG 142
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 42 APPRRQRVPGRACPWRE------PIRGRRGA--RPGGGDAGGTPGETVRHCSAPEDP 90
AP +P RA P RE P R RG RP GG GG + S P P
Sbjct: 58 APSPAPALPARARPPRENRKRAVPARAARGPPKRPAGGQTGGVEAASGEERSQPRRP 114
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 42 APPRRQRVPGRACPWRE------PIRGRRGA--RPGGGDAGGTPGETVRHCSAPEDP 90
AP +P RA P RE P R RG RP GG GG + S P P
Sbjct: 58 APSPAPALPARARPPRENRKRAVPARAARGPPKRPAGGQTGGVEAASGEERSQPRRP 114
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 42 APPRRQRVPGRACPWRE------PIRGRRGA--RPGGGDAGGTPGETVRHCSAPEDP 90
AP +P RA P RE P R RG RP GG GG + S P P
Sbjct: 58 APSPAPALPARARPPRENRKRAVPARAARGPPKRPAGGQTGGVEAASGEERSQPRRP 114
>gi|61966701 dorsal neural-tube nuclear protein [Homo sapiens]
Length = 398
Score = 29.6 bits (65), Expect = 4.5
Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 13/110 (11%)
Query: 16 QWRANPSRGGGGVSFTKEVDTNVATG---APPRRQRVPGRACPWREPIRGRRGARPGGGD 72
QW+ R G G+ VD + +TG APP ++ + P E +R R RPG
Sbjct: 85 QWQPQSPRPGAGLGAASTVDPSESTGSSTAPPTKRHCRSLSEP-EELVRCRSPWRPGSSK 143
Query: 73 AGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIPET 122
TP + R C + S PG + R W P T
Sbjct: 144 V-WTP-VSKRRCDSG-------GSATRQGSPGAVLPRSAVWSTGPTSPAT 184
>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 1 [Homo sapiens]
Length = 964
Score = 29.3 bits (64), Expect = 5.9
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 15/88 (17%)
Query: 43 PPRRQRVPGRACPWR-EPIRGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYP 101
PPR PG W +P R R PGGG G G + E P R +S+ P
Sbjct: 138 PPRPAPSPGT---WESQPARSVRLGGPGGGAGGAGGGRVL------ECPSIRITSISPTP 188
Query: 102 F-PGTIKSRDMSW----KRHHLIPETFG 124
P ++ +W R + PE FG
Sbjct: 189 EPPAALEDNPDAWGDGSPRDYPPPEGFG 216
>gi|27886563 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 2 [Homo sapiens]
Length = 902
Score = 29.3 bits (64), Expect = 5.9
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 15/88 (17%)
Query: 43 PPRRQRVPGRACPWR-EPIRGRRGARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYP 101
PPR PG W +P R R PGGG G G + E P R +S+ P
Sbjct: 75 PPRPAPSPGT---WESQPARSVRLGGPGGGAGGAGGGRVL------ECPSIRITSISPTP 125
Query: 102 F-PGTIKSRDMSW----KRHHLIPETFG 124
P ++ +W R + PE FG
Sbjct: 126 EPPAALEDNPDAWGDGSPRDYPPPEGFG 153
>gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo
sapiens]
Length = 609
Score = 29.3 bits (64), Expect = 5.9
Identities = 34/109 (31%), Positives = 40/109 (36%), Gaps = 38/109 (34%)
Query: 18 RANPSRGGGG---VSFTKEVDTNVATGAPPRRQ-----------RVPGRACPWREPIRGR 63
RA+PS GG VS T + +GA P+R RVP P R GR
Sbjct: 471 RASPSAPGGDQDRVSTTPQPTAQPGSGAGPQRPGPTQKRGGRGVRVP-EGSPARIAFSGR 529
Query: 64 RGA-----------------RPGGGDAGGTPGETVRH------CSAPED 89
RG R GGG AGG +R C+AP D
Sbjct: 530 RGGAKAQPMAEAESLGDRERRDGGGAAGGGAVAQLRAVGQGALCAAPRD 578
>gi|169183786 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 29.3 bits (64), Expect = 5.9
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Query: 47 QRVPGRACPWREPIRGRRGARPGGGDAG 74
QR PG PW + GRRG RP G G
Sbjct: 19 QRSPGSLSPW---LLGRRGRRPWGSSRG 43
>gi|239754889 PREDICTED: similar to hCG2036697 [Homo sapiens]
Length = 1029
Score = 29.3 bits (64), Expect = 5.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 72 DAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRH 116
D G + VR A ++ IF S H Y FPG + D W++H
Sbjct: 145 DQGEDDCKIVRELYARDNSIFSASRYHVYTFPGKLFYDD--WRKH 187
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,690,290
Number of Sequences: 37866
Number of extensions: 799517
Number of successful extensions: 2554
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 2520
Number of HSP's gapped (non-prelim): 60
length of query: 368
length of database: 18,247,518
effective HSP length: 104
effective length of query: 264
effective length of database: 14,309,454
effective search space: 3777695856
effective search space used: 3777695856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.