Guide to the Human Genome
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Name: FLJ31945 Sequence: fasta or formatted (466aa) NCBI GI: 169206171
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {564aa} PREDICTED: hypothetical protein
alt prot {564aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         55           3
 C cysteine            2.6         12           1
 D aspartate           1.9          9           1
 E glutamate           2.1         10           1
 F phenylalanine       1.5          7           1
 G glycine            16.1         75           5
 H histidine           2.6         12           2
 I isoleucine          0.4          2           1
 K lysine              1.9          9           1
 L leucine             7.3         34           2
 M methionine          0.2          1           1
 N asparagine          1.1          5           1
 P proline            11.4         53           4
 Q glutamine           3.2         15           1
 R arginine           13.7         64           2
 S serine             11.4         53           2
 T threonine           5.4         25           2
 V valine              3.9         18           1
 W tryptophan          1.5          7           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
FLJ31945              0.733   PREDICTED: hypothetical protein 
FLJ31945              0.733   PREDICTED: hypothetical protein 
COL3A1                0.041   collagen type III alpha 1 preproprotein 
PRR12                 0.039   proline rich 12 
FLJ37078              0.035   hypothetical protein LOC222183 
COL2A1                0.034   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.034   collagen, type II, alpha 1 isoform 2 precursor [Hom...
DACT3                 0.034   thymus expressed gene 3-like 
COL1A2                0.033   alpha 2 type I collagen 
SRRM2                 0.032   splicing coactivator subunit SRm300 
COL1A1                0.031   alpha 1 type I collagen preproprotein 
LOC100291627          0.031   PREDICTED: hypothetical protein XP_002345251 
LOC100289867          0.031   PREDICTED: hypothetical protein XP_002348034 
COL5A2                0.030   alpha 2 type V collagen preproprotein 
LOC100291634          0.029   PREDICTED: hypothetical protein XP_002346062 
LOC100287232          0.029   PREDICTED: hypothetical protein XP_002342816 
LOC100287232          0.029   PREDICTED: hypothetical protein 
BAT2                  0.029   HLA-B associated transcript-2 
COL4A3                0.029   alpha 3 type IV collagen isoform 4 precursor 
COL4A3                0.029   alpha 3 type IV collagen isoform 2 precursor 
COL4A3                0.029   alpha 3 type IV collagen isoform 1 precursor 
COL16A1               0.029   alpha 1 type XVI collagen precursor 
LOC100291533          0.029   PREDICTED: hypothetical protein XP_002347080 
LOC100288002          0.029   PREDICTED: hypothetical protein XP_002342946 
LOC338758             0.027   PREDICTED: hypothetical protein 
LOC338758             0.027   PREDICTED: hypothetical protein 
LOC100287499          0.027   PREDICTED: hypothetical protein 
LOC100287499          0.027   PREDICTED: hypothetical protein XP_002343643 
ARID1A                0.027   AT rich interactive domain 1A isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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