C14orf49 4113

Name: C14orf49	Sequence: fasta or formatted (975aa)		NCBI GI: 145580592
Description: nesprin-3		Referenced in: Spectrin and Plectin Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 82 3 C cysteine 1.1 11 2 D aspartate 4.6 45 2 E glutamate 10.4 101 5 F phenylalanine 2.9 28 1 G glycine 4.5 44 1 H histidine 2.4 23 1 I isoleucine 2.6 25 2 K lysine 5.1 50 2 L leucine 16.0 156 5 M methionine 2.2 21 2 N asparagine 2.5 24 2 P proline 3.9 38 3 Q glutamine 8.3 81 2 R arginine 8.1 79 3 S serine 5.5 54 2 T threonine 3.4 33 2 V valine 5.0 49 2 W tryptophan 2.2 21 1 Y tyrosine 1.0 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nesprin-3 SYNE1 0.137 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.137 spectrin repeat containing, nuclear envelope 1 isof... SYNE2 0.038 spectrin repeat containing, nuclear envelope 2 isof... SYNE2 0.038 spectrin repeat containing, nuclear envelope 2 isof... DST 0.029 dystonin isoform 4 DST 0.029 dystonin isoform 3 DST 0.029 dystonin isoform 2 DST 0.029 dystonin isoform 1 DST 0.029 dystonin isoform 1eA precursor SYNE2 0.027 spectrin repeat containing, nuclear envelope 2 isofo... SYNE2 0.027 spectrin repeat containing, nuclear envelope 2 isofo... MACF1 0.026 microfilament and actin filament cross-linker protei... MACF1 0.026 microfilament and actin filament cross-linker protei... PLEC1 0.025 plectin 1 isoform 11 PLEC1 0.025 plectin 1 isoform 10 PLEC1 0.025 plectin 1 isoform 8 PLEC1 0.025 plectin 1 isoform 7 PLEC1 0.025 plectin 1 isoform 6 PLEC1 0.025 plectin 1 isoform 3 PLEC1 0.025 plectin 1 isoform 2 PLEC1 0.025 plectin 1 isoform 1 SYNE1 0.025 spectrin repeat containing, nuclear envelope 1 isof... SYNE1 0.025 spectrin repeat containing, nuclear envelope 1 isof... CENPF 0.022 centromere protein F MYH3 0.022 myosin, heavy chain 3, skeletal muscle, embryonic [H... SPTAN1 0.021 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.021 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... MYH10 0.021 myosin, heavy polypeptide 10, non-muscle MYH11 0.019 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.