SRP72 470

Name: SRP72	Sequence: fasta or formatted (671aa)		NCBI GI: 109638749
Description: signal recognition particle 72kDa		Referenced in: ER, Golgi, and the Secretory Pathway Tetratricopeptide Domains
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 60 2 C cysteine 1.5 10 1 D aspartate 4.5 30 2 E glutamate 6.9 46 2 F phenylalanine 1.3 9 1 G glycine 5.8 39 2 H histidine 2.1 14 1 I isoleucine 5.5 37 2 K lysine 11.2 75 8 L leucine 10.0 67 2 M methionine 1.3 9 1 N asparagine 5.1 34 2 P proline 4.0 27 2 Q glutamine 7.5 50 3 R arginine 3.7 25 2 S serine 7.3 49 2 T threonine 4.8 32 1 V valine 4.8 32 2 W tryptophan 0.9 6 1 Y tyrosine 3.0 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 signal recognition particle 72kDa NEFM 0.014 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.014 neurofilament, medium polypeptide 150kDa isoform 2 ... TTC21B 0.013 tetratricopeptide repeat domain 21B TMTC1 0.013 transmembrane and tetratricopeptide repeat containin... KLC1 0.012 kinesin light chain 1 isoform 3 HIST1H1E 0.012 histone cluster 1, H1e HDGF2 0.012 hepatoma-derived growth factor-related protein 2 iso... HDGF2 0.012 hepatoma-derived growth factor-related protein 2 iso... CYLC1 0.012 cylicin, basic protein of sperm head cytoskeleton 1... KLC1 0.012 kinesin light chain 1 isoform 2 KLC1 0.012 kinesin light chain 1 isoform 1 C10orf118 0.012 CTCL tumor antigen L14-2 TMF1 0.011 TATA element modulatory factor 1 OGT 0.011 O-linked GlcNAc transferase isoform 2 OGT 0.011 O-linked GlcNAc transferase isoform 1 RTF1 0.011 Paf1/RNA polymerase II complex component LOC100294364 0.011 PREDICTED: hypothetical protein IFT88 0.010 intraflagellar transport 88 homolog isoform 1 IFT88 0.010 intraflagellar transport 88 homolog isoform 2 HIST1H1D 0.010 histone cluster 1, H1d DNAJC3 0.009 DnaJ (Hsp40) homolog, subfamily C, member 3 NEFH 0.009 neurofilament, heavy polypeptide 200kDa NCOR1 0.009 nuclear receptor co-repressor 1 AP3D1 0.009 adaptor-related protein complex 3, delta 1 subunit ... AEBP1 0.009 adipocyte enhancer binding protein 1 precursor [Homo... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform b ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.