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Search of human proteins with 14196448
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14196448 protocadherin gamma subfamily A, 10 isoform 2
precursor [Homo sapiens]
(850 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 1662 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 1588 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 1202 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 1196 0.0
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur... 1169 0.0
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs... 1164 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 1152 0.0
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs... 1150 0.0
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso... 1150 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 1149 0.0
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs... 1141 0.0
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs... 1136 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 1134 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 1134 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 1132 0.0
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 1131 0.0
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 1131 0.0
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 1128 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 1127 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 1127 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 1123 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 1123 0.0
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 1121 0.0
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 1121 0.0
gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precur... 848 0.0
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 672 0.0
gi|14270490 protocadherin gamma subfamily B, 1 isoform 2 precurs... 672 0.0
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs... 672 0.0
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs... 672 0.0
gi|14270508 protocadherin gamma subfamily B, 7 isoform 2 precurs... 672 0.0
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 1662 bits (4303), Expect = 0.0
Identities = 850/850 (100%), Positives = 850/850 (100%)
Query: 1 MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60
MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP
Sbjct: 1 MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60
Query: 61 RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120
RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL
Sbjct: 61 RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120
Query: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180
FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK
Sbjct: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180
Query: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240
HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN
Sbjct: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240
Query: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300
DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK
Sbjct: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300
Query: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360
YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV
Sbjct: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360
Query: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420
TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS
Sbjct: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420
Query: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480
SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA
Sbjct: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480
Query: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540
LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD
Sbjct: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540
Query: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600
SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR
Sbjct: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600
Query: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660
DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA
Sbjct: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660
Query: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720
TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL
Sbjct: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720
Query: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780
RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA
Sbjct: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780
Query: 781 DTLISQESCEKNDPLSLLDDSKFPIEDTPLVPVSFIFIFTFVKKKKIGFYFEVCGMMVES 840
DTLISQESCEKNDPLSLLDDSKFPIEDTPLVPVSFIFIFTFVKKKKIGFYFEVCGMMVES
Sbjct: 781 DTLISQESCEKNDPLSLLDDSKFPIEDTPLVPVSFIFIFTFVKKKKIGFYFEVCGMMVES 840
Query: 841 VNAKTLMSRI 850
VNAKTLMSRI
Sbjct: 841 VNAKTLMSRI 850
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 1588 bits (4112), Expect = 0.0
Identities = 812/812 (100%), Positives = 812/812 (100%)
Query: 1 MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60
MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP
Sbjct: 1 MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60
Query: 61 RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120
RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL
Sbjct: 61 RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120
Query: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180
FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK
Sbjct: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180
Query: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240
HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN
Sbjct: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240
Query: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300
DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK
Sbjct: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300
Query: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360
YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV
Sbjct: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360
Query: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420
TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS
Sbjct: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420
Query: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480
SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA
Sbjct: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480
Query: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540
LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD
Sbjct: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540
Query: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600
SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR
Sbjct: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600
Query: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660
DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA
Sbjct: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660
Query: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720
TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL
Sbjct: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720
Query: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780
RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA
Sbjct: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780
Query: 781 DTLISQESCEKNDPLSLLDDSKFPIEDTPLVP 812
DTLISQESCEKNDPLSLLDDSKFPIEDTPLVP
Sbjct: 781 DTLISQESCEKNDPLSLLDDSKFPIEDTPLVP 812
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 1202 bits (3111), Expect = 0.0
Identities = 617/803 (76%), Positives = 670/803 (83%)
Query: 17 LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76
LVLLC G+ WEA A QI YS+PEE EKG VGNISKDL L PRELAER VRIVSRGRT
Sbjct: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
Query: 77 QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136
QLFSLNPRSG+L+TAGRIDREELCAQS RC+V+F +LVEDRVKL+GIEIEVTDIND+APK
Sbjct: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
Query: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196
FQAE+L+VKINE G R+PLPEAIDPDVGVNSLQSYQLSPN HFSL VQ+ NG P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
Query: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256
ELVLE +LDREE HHLVLTASDGG+P RS TV + VTV D NDNAPVF YRV V
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
Query: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316
EN+P GT LLT TA+D DEG NG+V Y F K+ + Q L FQLN+ TGEI +++LDYEE
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
Query: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376
FYE+EIQAEDGG KVLI+VEDVNDN PE+TITSLFSPV ED+P GTV+ L N H
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
Query: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436
D DS +NGQV CSI L F LE S + YYRL+ + LDRE+ S YNITVTATD G+PPL
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
Query: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496
STE H LQV DINDNPP FSQ SY Y+PENNARG SIFSV A DPDS EN+++IYSLA
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
Query: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556
EDTIQG PLS+Y+SINSDTGVLYAL SFDYEQF +LQMQVTASDSG PPLSSNVSL LFV
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
Query: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
Query: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676
EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
Query: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 736
ADLGS + PA+ E SDLTLYLVVAVA VSCVFL FVI LLA RLR WH S LL+A+ GL
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
Query: 737 TGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLS 796
GV SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEKN+PL
Sbjct: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
Query: 797 LLDDSKFPIEDTPLVPVSFIFIF 819
+ DSKFPIEDTPLVPVS F F
Sbjct: 793 VSVDSKFPIEDTPLVPVSSFFFF 815
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1196 bits (3093), Expect = 0.0
Identities = 613/796 (77%), Positives = 666/796 (83%)
Query: 17 LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76
LVLLC G+ WEA A QI YS+PEE EKG VGNISKDL L PRELAER VRIVSRGRT
Sbjct: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
Query: 77 QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136
QLFSLNPRSG+L+TAGRIDREELCAQS RC+V+F +LVEDRVKL+GIEIEVTDIND+APK
Sbjct: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
Query: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196
FQAE+L+VKINE G R+PLPEAIDPDVGVNSLQSYQLSPN HFSL VQ+ NG P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
Query: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256
ELVLE +LDREE HHLVLTASDGG+P RS TV + VTV D NDNAPVF YRV V
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
Query: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316
EN+P GT LLT TA+D DEG NG+V Y F K+ + Q L FQLN+ TGEI +++LDYEE
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
Query: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376
FYE+EIQAEDGG KVLI+VEDVNDN PE+TITSLFSPV ED+P GTV+ L N H
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
Query: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436
D DS +NGQV CSI L F LE S + YYRL+ + LDRE+ S YNITVTATD G+PPL
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
Query: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496
STE H LQV DINDNPP FSQ SY Y+PENNARG SIFSV A DPDS EN+++IYSLA
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
Query: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556
EDTIQG PLS+Y+SINSDTGVLYAL SFDYEQF +LQMQVTASDSG PPLSSNVSL LFV
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
Query: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
Query: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676
EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
Query: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 736
ADLGS + PA+ E SDLTLYLVVAVA VSCVFL FVI LLA RLR WH S LL+A+ GL
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
Query: 737 TGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLS 796
GV SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEKN+PL
Sbjct: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
Query: 797 LLDDSKFPIEDTPLVP 812
+ DSKFPIEDTPLVP
Sbjct: 793 VSVDSKFPIEDTPLVP 808
>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1169 bits (3023), Expect = 0.0
Identities = 600/808 (74%), Positives = 669/808 (82%)
Query: 12 KDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIV 71
+D GLVLL + G WE G QI YS+PEELEKGS VG+IS+DLGL PRELAERGVRI+
Sbjct: 8 RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67
Query: 72 SRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIN 131
RGRTQLF+LNPRSGSL+TAGRIDREELC + +C ++ +IL+ED+VK++G+E+EV DIN
Sbjct: 68 PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127
Query: 132 DNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRAN 191
DNAP F+ L++KI+EN A MRFPLP A DPD+G NSLQSY+LSPN HFSL VQ+ A+
Sbjct: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187
Query: 192 GVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEY 251
G KYPELVL+ +LDREE+A HHLVLTASDGGDP+R+GT + V V DANDNAP F PEY
Sbjct: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247
Query: 252 RVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENL 311
R SVPENL +GTQLL V ATD DEG N EV YSFR + D F+L+ +G I L
Sbjct: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307
Query: 312 DYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVA 371
D+EE+GFY++E+QA D Y A AKVLITV DVNDN+PE+ +TSL S V E+SP GT++A
Sbjct: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367
Query: 372 LLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDG 431
LLNV+D DSE+NGQV C I LPFKLEKS +YY LV LDREQV SYNITVTATD
Sbjct: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427
Query: 432 GSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQI 491
G+PPLSTE H L VAD NDNPP F Q SY YIPENN RG S+ SVTA DPD +ENAQI
Sbjct: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487
Query: 492 IYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVS 551
YSLAE+TIQG LSSY+SINSDTGVLYAL SFDYEQF +LQ++V A D+G PPLSSNVS
Sbjct: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547
Query: 552 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 611
LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
Query: 612 LLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 671
LLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS
Sbjct: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
Query: 672 IPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQA 731
IPQVLADLGS ESPANSETSDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQA
Sbjct: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727
Query: 732 SGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 791
SGGGLTG SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
Query: 792 NDPLSLLDDSKFPIEDTPLVPVSFIFIF 819
++PL L DS F + L+ VS IF
Sbjct: 788 SEPLLLSGDSVFSKDSHGLIEVSLYQIF 815
>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1164 bits (3010), Expect = 0.0
Identities = 596/800 (74%), Positives = 665/800 (83%)
Query: 12 KDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIV 71
+D GLVLL + G WE G QI YS+PEELEKGS VG+IS+DLGL PRELAERGVRI+
Sbjct: 8 RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67
Query: 72 SRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIN 131
RGRTQLF+LNPRSGSL+TAGRIDREELC + +C ++ +IL+ED+VK++G+E+EV DIN
Sbjct: 68 PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127
Query: 132 DNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRAN 191
DNAP F+ L++KI+EN A MRFPLP A DPD+G NSLQSY+LSPN HFSL VQ+ A+
Sbjct: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187
Query: 192 GVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEY 251
G KYPELVL+ +LDREE+A HHLVLTASDGGDP+R+GT + V V DANDNAP F PEY
Sbjct: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247
Query: 252 RVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENL 311
R SVPENL +GTQLL V ATD DEG N EV YSFR + D F+L+ +G I L
Sbjct: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307
Query: 312 DYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVA 371
D+EE+GFY++E+QA D Y A AKVLITV DVNDN+PE+ +TSL S V E+SP GT++A
Sbjct: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367
Query: 372 LLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDG 431
LLNV+D DSE+NGQV C I LPFKLEKS +YY LV LDREQV SYNITVTATD
Sbjct: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427
Query: 432 GSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQI 491
G+PPLSTE H L VAD NDNPP F Q SY YIPENN RG S+ SVTA DPD +ENAQI
Sbjct: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487
Query: 492 IYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVS 551
YSLAE+TIQG LSSY+SINSDTGVLYAL SFDYEQF +LQ++V A D+G PPLSSNVS
Sbjct: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547
Query: 552 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 611
LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
Query: 612 LLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 671
LLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS
Sbjct: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
Query: 672 IPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQA 731
IPQVLADLGS ESPANSETSDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQA
Sbjct: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727
Query: 732 SGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 791
SGGGLTG SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
Query: 792 NDPLSLLDDSKFPIEDTPLV 811
++PL L DS F + L+
Sbjct: 788 SEPLLLSGDSVFSKDSHGLI 807
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 1152 bits (2979), Expect = 0.0
Identities = 591/802 (73%), Positives = 663/802 (82%)
Query: 13 DCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVS 72
D G LL + G PWEA A +I YS+ EE +KGSFVG+I+KDLGL PRELAERGVRI+S
Sbjct: 9 DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68
Query: 73 RGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIND 132
RGRTQLF+LN RSGSL+TAGRIDREE+CAQSARC+V+FNIL+ED++ L+ I++E+ DIND
Sbjct: 69 RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128
Query: 133 NAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANG 192
N P+F E ++VKI EN A G+RFPL EA DPDVG NSLQSYQLSPN+HFSL VQS +
Sbjct: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188
Query: 193 VKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYR 252
KYPELVLE LDREEE +HHLVLTASDGGDP RS T + VTV D ND+ PVF+LP+Y+
Sbjct: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248
Query: 253 VSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLD 312
V+VPEN+PVGT+LLTV A D DEG NGEVTYSFRK+ F LN TGEI E LD
Sbjct: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308
Query: 313 YEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVAL 372
YEET FYE+E+QA+DG L AKVLITV DVNDN+PE+T+TSL S + ED+PLGTV+AL
Sbjct: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368
Query: 373 LNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGG 432
+ D DS +NG+VTC+I LPFKLEKSID+YYRLV + LDRE +S YNIT+ ATDGG
Sbjct: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428
Query: 433 SPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQII 492
+PPLS E H +QVAD NDNPPTF SY YI ENN RGASIF VTA D DS++NAQI
Sbjct: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488
Query: 493 YSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSL 552
YSLAEDTIQG P+SSY+SINSDTGVLYAL+SFDYEQ ELQ++VTA DSGDPPLSSN+SL
Sbjct: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548
Query: 553 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 612
SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608
Query: 613 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 672
LKASEPGLFAVG +TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
Query: 673 PQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 732
P+VLADLGS E DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWHKSRLLQAS
Sbjct: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728
Query: 733 GGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKN 792
GGL V SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEKN
Sbjct: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788
Query: 793 DPLSLLDDSKFPIEDTPLVPVS 814
D L D + E+ P + VS
Sbjct: 789 DSLLTSVDFQECKENLPSIQVS 810
>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1150 bits (2975), Expect = 0.0
Identities = 596/795 (74%), Positives = 658/795 (82%), Gaps = 4/795 (0%)
Query: 1 MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60
MAA ++R + + L+LLC G WE G QI YS+PEE +KGSFVGNISKDLGL P
Sbjct: 1 MAAPQSRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDP 56
Query: 61 RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120
R+LA+ GVRIVSRGRTQLF+LNPRSGSLITAGRIDREELCAQS RC+++ N LVED+ KL
Sbjct: 57 RKLAKHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKL 116
Query: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180
FG+EIE+ DINDN PKFQ E+L+VKINE G R+PLPEA+DPDVGVNSLQSYQLSPN
Sbjct: 117 FGVEIEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNH 176
Query: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240
HFSL VQ+ NG PELVLE +LDREEEA HHLVLTASDGG P RS TV + VTV D N
Sbjct: 177 HFSLDVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTN 236
Query: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300
DNAPVF P YRV V EN+P GT+LLTVTA+D DEG NG+V Y FRK+ + Q FQLN+
Sbjct: 237 DNAPVFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNE 296
Query: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360
TGEI I+++LDYEE FYE+EIQAED GA L K+LI+VEDVNDN PE+ ITSLFSPV
Sbjct: 297 NTGEISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPV 356
Query: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420
E+S GTV+A L+VHD DS +NGQV C LPFKLEKSI +YYRLV + LDRE VS
Sbjct: 357 LENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVS 416
Query: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480
YNITV A+D G+PPLSTE L VADINDNPPTF SY YI ENN RGASIFS+TA
Sbjct: 417 IYNITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTA 476
Query: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540
DPDS+ENAQ+ YS+ EDT+QG PLSSYISINSDTGVLYAL+SFDYEQ +LQ+ VTASD
Sbjct: 477 HDPDSQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASD 536
Query: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600
SGDPPLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDR
Sbjct: 537 SGDPPLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDR 596
Query: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660
DSGQNAWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA
Sbjct: 597 DSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 656
Query: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720
TVTLTVAVADSIP+VL +LGS + + S LTLYLVVAVAA+SCVFLAFV VLL RL
Sbjct: 657 TVTLTVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRL 716
Query: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780
RRWHKSRLLQ SGG L GV SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYA
Sbjct: 717 RRWHKSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYA 776
Query: 781 DTLISQESCEKNDPL 795
D LISQE CEKND L
Sbjct: 777 DMLISQEGCEKNDSL 791
>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1150 bits (2975), Expect = 0.0
Identities = 596/795 (74%), Positives = 658/795 (82%), Gaps = 4/795 (0%)
Query: 1 MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60
MAA ++R + + L+LLC G WE G QI YS+PEE +KGSFVGNISKDLGL P
Sbjct: 1 MAAPQSRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDP 56
Query: 61 RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120
R+LA+ GVRIVSRGRTQLF+LNPRSGSLITAGRIDREELCAQS RC+++ N LVED+ KL
Sbjct: 57 RKLAKHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKL 116
Query: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180
FG+EIE+ DINDN PKFQ E+L+VKINE G R+PLPEA+DPDVGVNSLQSYQLSPN
Sbjct: 117 FGVEIEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNH 176
Query: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240
HFSL VQ+ NG PELVLE +LDREEEA HHLVLTASDGG P RS TV + VTV D N
Sbjct: 177 HFSLDVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTN 236
Query: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300
DNAPVF P YRV V EN+P GT+LLTVTA+D DEG NG+V Y FRK+ + Q FQLN+
Sbjct: 237 DNAPVFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNE 296
Query: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360
TGEI I+++LDYEE FYE+EIQAED GA L K+LI+VEDVNDN PE+ ITSLFSPV
Sbjct: 297 NTGEISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPV 356
Query: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420
E+S GTV+A L+VHD DS +NGQV C LPFKLEKSI +YYRLV + LDRE VS
Sbjct: 357 LENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVS 416
Query: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480
YNITV A+D G+PPLSTE L VADINDNPPTF SY YI ENN RGASIFS+TA
Sbjct: 417 IYNITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTA 476
Query: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540
DPDS+ENAQ+ YS+ EDT+QG PLSSYISINSDTGVLYAL+SFDYEQ +LQ+ VTASD
Sbjct: 477 HDPDSQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASD 536
Query: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600
SGDPPLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDR
Sbjct: 537 SGDPPLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDR 596
Query: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660
DSGQNAWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA
Sbjct: 597 DSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 656
Query: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720
TVTLTVAVADSIP+VL +LGS + + S LTLYLVVAVAA+SCVFLAFV VLL RL
Sbjct: 657 TVTLTVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRL 716
Query: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780
RRWHKSRLLQ SGG L GV SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYA
Sbjct: 717 RRWHKSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYA 776
Query: 781 DTLISQESCEKNDPL 795
D LISQE CEKND L
Sbjct: 777 DMLISQEGCEKNDSL 791
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1149 bits (2972), Expect = 0.0
Identities = 589/799 (73%), Positives = 661/799 (82%)
Query: 13 DCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVS 72
D G LL + G PWEA A +I YS+ EE +KGSFVG+I+KDLGL PRELAERGVRI+S
Sbjct: 9 DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68
Query: 73 RGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIND 132
RGRTQLF+LN RSGSL+TAGRIDREE+CAQSARC+V+FNIL+ED++ L+ I++E+ DIND
Sbjct: 69 RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128
Query: 133 NAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANG 192
N P+F E ++VKI EN A G+RFPL EA DPDVG NSLQSYQLSPN+HFSL VQS +
Sbjct: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188
Query: 193 VKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYR 252
KYPELVLE LDREEE +HHLVLTASDGGDP RS T + VTV D ND+ PVF+LP+Y+
Sbjct: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248
Query: 253 VSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLD 312
V+VPEN+PVGT+LLTV A D DEG NGEVTYSFRK+ F LN TGEI E LD
Sbjct: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308
Query: 313 YEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVAL 372
YEET FYE+E+QA+DG L AKVLITV DVNDN+PE+T+TSL S + ED+PLGTV+AL
Sbjct: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368
Query: 373 LNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGG 432
+ D DS +NG+VTC+I LPFKLEKSID+YYRLV + LDRE +S YNIT+ ATDGG
Sbjct: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428
Query: 433 SPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQII 492
+PPLS E H +QVAD NDNPPTF SY YI ENN RGASIF VTA D DS++NAQI
Sbjct: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488
Query: 493 YSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSL 552
YSLAEDTIQG P+SSY+SINSDTGVLYAL+SFDYEQ ELQ++VTA DSGDPPLSSN+SL
Sbjct: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548
Query: 553 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 612
SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608
Query: 613 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 672
LKASEPGLFAVG +TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
Query: 673 PQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 732
P+VLADLGS E DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWHKSRLLQAS
Sbjct: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728
Query: 733 GGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKN 792
GGL V SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEKN
Sbjct: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788
Query: 793 DPLSLLDDSKFPIEDTPLV 811
D L D + E+ P +
Sbjct: 789 DSLLTSVDFQECKENLPSI 807
>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
[Homo sapiens]
Length = 829
Score = 1141 bits (2952), Expect = 0.0
Identities = 585/810 (72%), Positives = 662/810 (81%), Gaps = 1/810 (0%)
Query: 16 GLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGR 75
GL LLC G E G+ QI YS+ EEL+KGSFVGNI+ DLGL PRELAERGVRIVSRGR
Sbjct: 12 GLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGR 71
Query: 76 TQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAP 135
TQLFSLNP+SGSL+TA RIDREELCAQ C+V NILVED++K+F +EIE+ DINDNAP
Sbjct: 72 TQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAP 131
Query: 136 KFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKY 195
F E L++KI E G RFP+ A DPDVG+NSLQ+Y+LSPN +FSL V S + G KY
Sbjct: 132 NFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKY 191
Query: 196 PELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSV 255
PELVLE +LDRE++ IH LVL ASDGGDP+ SG + + V V DANDN P+FT PEYRVSV
Sbjct: 192 PELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSV 251
Query: 256 PENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEE 315
EN+PVGT+LLTV ATD DEG N +V+Y K+P F LN +GE+ I ++LDYE+
Sbjct: 252 WENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYED 311
Query: 316 TGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNV 375
FYEI+I+A+DG L+ AK+L+TV DVNDN+PE+TITSL S V E+ +G +AL++V
Sbjct: 312 AMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDV 371
Query: 376 HDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPP 435
HD DS QNGQV +L LPFKLEKSID YYRLV +LDREQ+S YNI++ A+DGGSPP
Sbjct: 372 HDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPP 431
Query: 436 LSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSL 495
LSTE H L V DINDNPPTF +SY YIPENN RGASIFSVTA DPDS NA+I Y+L
Sbjct: 432 LSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYAL 491
Query: 496 AEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLF 555
EDT+QG PLSS++SINS+TGVLYALRSFDYEQF +L++ VTASDSG+PPLSSNVSL+LF
Sbjct: 492 TEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLF 551
Query: 556 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 615
VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA
Sbjct: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
Query: 616 SEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 675
SEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDI 671
Query: 676 LADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 735
LADLGS E A SDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGG
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGG 731
Query: 736 LTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPL 795
L GSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK++PL
Sbjct: 732 LASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPL 791
Query: 796 SLLDDSKFPIEDTPLVPVSFIFIFTFVKKK 825
+ D D+ L+ VS +FI +K K
Sbjct: 792 LITQDLLEMKGDSNLLQVS-LFISLIIKNK 820
>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1136 bits (2939), Expect = 0.0
Identities = 577/785 (73%), Positives = 650/785 (82%)
Query: 16 GLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGR 75
GL LLC G E G+ QI YS+ EEL+KGSFVGNI+ DLGL PRELAERGVRIVSRGR
Sbjct: 12 GLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGR 71
Query: 76 TQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAP 135
TQLFSLNP+SGSL+TA RIDREELCAQ C+V NILVED++K+F +EIE+ DINDNAP
Sbjct: 72 TQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAP 131
Query: 136 KFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKY 195
F E L++KI E G RFP+ A DPDVG+NSLQ+Y+LSPN +FSL V S + G KY
Sbjct: 132 NFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKY 191
Query: 196 PELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSV 255
PELVLE +LDRE++ IH LVL ASDGGDP+ SG + + V V DANDN P+FT PEYRVSV
Sbjct: 192 PELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSV 251
Query: 256 PENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEE 315
EN+PVGT+LLTV ATD DEG N +V+Y K+P F LN +GE+ I ++LDYE+
Sbjct: 252 WENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYED 311
Query: 316 TGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNV 375
FYEI+I+A+DG L+ AK+L+TV DVNDN+PE+TITSL S V E+ +G +AL++V
Sbjct: 312 AMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDV 371
Query: 376 HDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPP 435
HD DS QNGQV +L LPFKLEKSID YYRLV +LDREQ+S YNI++ A+DGGSPP
Sbjct: 372 HDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPP 431
Query: 436 LSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSL 495
LSTE H L V DINDNPPTF +SY YIPENN RGASIFSVTA DPDS NA+I Y+L
Sbjct: 432 LSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYAL 491
Query: 496 AEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLF 555
EDT+QG PLSS++SINS+TGVLYALRSFDYEQF +L++ VTASDSG+PPLSSNVSL+LF
Sbjct: 492 TEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLF 551
Query: 556 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 615
VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA
Sbjct: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
Query: 616 SEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 675
SEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDI 671
Query: 676 LADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 735
LADLGS E A SDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGG
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGG 731
Query: 736 LTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPL 795
L GSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK++PL
Sbjct: 732 LASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPL 791
Query: 796 SLLDD 800
+ D
Sbjct: 792 LITQD 796
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1134 bits (2932), Expect = 0.0
Identities = 577/793 (72%), Positives = 652/793 (82%), Gaps = 4/793 (0%)
Query: 14 CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73
C LVLLC WEA A QI YS+ EE+++GSFVGNI+KDLGL P LAE+GVRIVSR
Sbjct: 10 CRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69
Query: 74 GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133
GR+QLF+LNPRSGSL+TA RIDREELCAQSA C+++FNIL+ED++ ++ +E+E+TDINDN
Sbjct: 70 GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129
Query: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193
AP+F E L++KI+E G R PL A D DVG N+LQ Y L+PN HFSL V+ A+G
Sbjct: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189
Query: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253
KYPELVLE SLDREEEA+HHLVL ASDGGDP+ SGT + V V DANDNAPVFT PEYR+
Sbjct: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249
Query: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313
S+PEN VGT++LTVTATD DEG +V Y K P F+L +GE+ I ++LDY
Sbjct: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309
Query: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373
E+ F+EI+I+A+DG L AKV++TV DVNDN+PE +TS S V+EDS GT++ L
Sbjct: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369
Query: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433
NVHD DS QN TCS+ LPFKLEKS+D+YYRLV RALDREQ S YNIT+TA DGG+
Sbjct: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429
Query: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493
P LST+AH +LQVADINDN P FS+ SY TYIPENN RGAS+FSVTA DPDS +NA + Y
Sbjct: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489
Query: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553
S AEDT+QG PLSSYISINSDTGVLYALRSFDYEQ +LQ+ V A DSG+PPLSSNVSLS
Sbjct: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549
Query: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613
LFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LL
Sbjct: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609
Query: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673
KASEPGLF+VG HTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVAD IP
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669
Query: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733
+LADLGS E A SDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG
Sbjct: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729
Query: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793
G LTG+ SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK D
Sbjct: 730 GSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789
Query: 794 ----PLSLLDDSK 802
P SLL++ +
Sbjct: 790 FLSAPQSLLEEER 802
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1134 bits (2932), Expect = 0.0
Identities = 577/793 (72%), Positives = 652/793 (82%), Gaps = 4/793 (0%)
Query: 14 CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73
C LVLLC WEA A QI YS+ EE+++GSFVGNI+KDLGL P LAE+GVRIVSR
Sbjct: 10 CRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69
Query: 74 GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133
GR+QLF+LNPRSGSL+TA RIDREELCAQSA C+++FNIL+ED++ ++ +E+E+TDINDN
Sbjct: 70 GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129
Query: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193
AP+F E L++KI+E G R PL A D DVG N+LQ Y L+PN HFSL V+ A+G
Sbjct: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189
Query: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253
KYPELVLE SLDREEEA+HHLVL ASDGGDP+ SGT + V V DANDNAPVFT PEYR+
Sbjct: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249
Query: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313
S+PEN VGT++LTVTATD DEG +V Y K P F+L +GE+ I ++LDY
Sbjct: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309
Query: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373
E+ F+EI+I+A+DG L AKV++TV DVNDN+PE +TS S V+EDS GT++ L
Sbjct: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369
Query: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433
NVHD DS QN TCS+ LPFKLEKS+D+YYRLV RALDREQ S YNIT+TA DGG+
Sbjct: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429
Query: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493
P LST+AH +LQVADINDN P FS+ SY TYIPENN RGAS+FSVTA DPDS +NA + Y
Sbjct: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489
Query: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553
S AEDT+QG PLSSYISINSDTGVLYALRSFDYEQ +LQ+ V A DSG+PPLSSNVSLS
Sbjct: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549
Query: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613
LFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LL
Sbjct: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609
Query: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673
KASEPGLF+VG HTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVAD IP
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669
Query: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733
+LADLGS E A SDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG
Sbjct: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729
Query: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793
G LTG+ SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK D
Sbjct: 730 GSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789
Query: 794 ----PLSLLDDSK 802
P SLL++ +
Sbjct: 790 FLSAPQSLLEEER 802
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 1132 bits (2928), Expect = 0.0
Identities = 578/804 (71%), Positives = 667/804 (82%), Gaps = 1/804 (0%)
Query: 14 CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73
C L+L + G E G+ QI YS+PEEL+KGSFVGNI+KDLGL P+ELAERGVRIVSR
Sbjct: 10 CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69
Query: 74 GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133
GRTQLF+LNPRSGSL+TAGRIDREELCAQS CVV+FNILVE+++K++G+E+E+ DINDN
Sbjct: 70 GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129
Query: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193
P+F+ E L VK+NEN AAG R LP A D DVGVNSL+SYQLS N HFSL V S +G
Sbjct: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189
Query: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253
KYPELVLE LDRE+E +H L+LTA DGGDP+ SGT + VTV DANDNAP+FT EY V
Sbjct: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249
Query: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313
SVPEN+PVGT+LL +TATD DEG NG++TYSFR + FQL+ GEI ++LDY
Sbjct: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309
Query: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373
EE+ FY +E+ A+DGGA +A+AKV++TV+DVNDN+PE+ +TSL S ++ED GTV+AL
Sbjct: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369
Query: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433
+VHD DS +NG++ CSI LPFKLEKS+D+YY L+ R LDRE+ S YNIT+T D G+
Sbjct: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429
Query: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493
PPLSTE+H L+VAD+NDNPP F Q SY T + ENN RG SIFSVTA DPDS +NA++ Y
Sbjct: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489
Query: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553
SLAEDT QG PLSSY+SINSDTGVLYALRSFDYEQ +LQ+ VTASDSG+PPLSSNVSLS
Sbjct: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549
Query: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613
LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLL
Sbjct: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609
Query: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673
KASEPGLFAVG HTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP
Sbjct: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669
Query: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733
+LADLGS ++P + E DLTLYLVVAVAAVSCVFLAFVIVLL RLRRWHKSRLLQA G
Sbjct: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729
Query: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793
L GV SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK++
Sbjct: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789
Query: 794 PLSLLDDSKFPIEDTPLVPVSFIF 817
PL L+ D ++ V VSF+F
Sbjct: 790 PL-LMSDKVDANKEERRVQVSFLF 812
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 1131 bits (2925), Expect = 0.0
Identities = 573/796 (71%), Positives = 659/796 (82%)
Query: 6 NRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAE 65
NR + L+LLC+F G ARQI YS+PEE EKGSFVGNISKDLGL PRELA+
Sbjct: 3 NRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAK 62
Query: 66 RGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEI 125
RGVRIVSRG+TQLF++NPRSGSLITAGRIDREELC + C ++ +LVED +K++G+E+
Sbjct: 63 RGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEV 122
Query: 126 EVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLR 185
E+ DINDNAP FQ + +++K++E+ G RF LP A DPDVGVNSLQSYQLSPN +FSL+
Sbjct: 123 EIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQ 182
Query: 186 VQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPV 245
++ R +G K PELVLE SLDRE+EA H L+LTA DGGDP+R G V + V V D ND+ P+
Sbjct: 183 LRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPM 242
Query: 246 FTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEI 305
FT YRVSVPEN+ GT++L V ATD DEG NGEV YSFR + FQL+ TGE+
Sbjct: 243 FTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEV 302
Query: 306 KISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSP 365
++ +LD+E+ FYE+EIQ +DGG T +LITV DVNDN+PE+TITS + + E+SP
Sbjct: 303 QVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSP 362
Query: 366 LGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNIT 425
GTV+ALLNV D DS +NGQV+C I +LPFKLEK+ +YY+L+ R LDRE V SYNIT
Sbjct: 363 PGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNIT 422
Query: 426 VTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDS 485
+TATD GSPPLS E H L VAD NDNPP F SY YIPENN RGASIFSVTALDPDS
Sbjct: 423 LTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDS 482
Query: 486 KENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPP 545
K+NA + YSL +DT+QGVPLSSY+SINS+TGVLYAL+SFDYEQF +L+++V A DSGDPP
Sbjct: 483 KQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPP 542
Query: 546 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 605
LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 543 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQN 602
Query: 606 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 665
AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 603 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 662
Query: 666 VAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHK 725
VAVADSIP+VLADLGS ES ANSETSDL+LYLVVAVAAVSC+FL FVIVLLA RL RWHK
Sbjct: 663 VAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHK 722
Query: 726 SRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLIS 785
SRLLQAS GGL G+ SHFVGVDGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTLIS
Sbjct: 723 SRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLIS 782
Query: 786 QESCEKNDPLSLLDDS 801
QESCEK++PL + +DS
Sbjct: 783 QESCEKSEPLLIAEDS 798
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 1131 bits (2925), Expect = 0.0
Identities = 573/796 (71%), Positives = 659/796 (82%)
Query: 6 NRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAE 65
NR + L+LLC+F G ARQI YS+PEE EKGSFVGNISKDLGL PRELA+
Sbjct: 3 NRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAK 62
Query: 66 RGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEI 125
RGVRIVSRG+TQLF++NPRSGSLITAGRIDREELC + C ++ +LVED +K++G+E+
Sbjct: 63 RGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEV 122
Query: 126 EVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLR 185
E+ DINDNAP FQ + +++K++E+ G RF LP A DPDVGVNSLQSYQLSPN +FSL+
Sbjct: 123 EIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQ 182
Query: 186 VQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPV 245
++ R +G K PELVLE SLDRE+EA H L+LTA DGGDP+R G V + V V D ND+ P+
Sbjct: 183 LRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPM 242
Query: 246 FTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEI 305
FT YRVSVPEN+ GT++L V ATD DEG NGEV YSFR + FQL+ TGE+
Sbjct: 243 FTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEV 302
Query: 306 KISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSP 365
++ +LD+E+ FYE+EIQ +DGG T +LITV DVNDN+PE+TITS + + E+SP
Sbjct: 303 QVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSP 362
Query: 366 LGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNIT 425
GTV+ALLNV D DS +NGQV+C I +LPFKLEK+ +YY+L+ R LDRE V SYNIT
Sbjct: 363 PGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNIT 422
Query: 426 VTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDS 485
+TATD GSPPLS E H L VAD NDNPP F SY YIPENN RGASIFSVTALDPDS
Sbjct: 423 LTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDS 482
Query: 486 KENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPP 545
K+NA + YSL +DT+QGVPLSSY+SINS+TGVLYAL+SFDYEQF +L+++V A DSGDPP
Sbjct: 483 KQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPP 542
Query: 546 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 605
LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 543 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQN 602
Query: 606 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 665
AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 603 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 662
Query: 666 VAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHK 725
VAVADSIP+VLADLGS ES ANSETSDL+LYLVVAVAAVSC+FL FVIVLLA RL RWHK
Sbjct: 663 VAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHK 722
Query: 726 SRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLIS 785
SRLLQAS GGL G+ SHFVGVDGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTLIS
Sbjct: 723 SRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLIS 782
Query: 786 QESCEKNDPLSLLDDS 801
QESCEK++PL + +DS
Sbjct: 783 QESCEKSEPLLIAEDS 798
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1128 bits (2918), Expect = 0.0
Identities = 572/786 (72%), Positives = 658/786 (83%)
Query: 14 CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73
C L+L + G E G+ QI YS+PEEL+KGSFVGNI+KDLGL P+ELAERGVRIVSR
Sbjct: 10 CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69
Query: 74 GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133
GRTQLF+LNPRSGSL+TAGRIDREELCAQS CVV+FNILVE+++K++G+E+E+ DINDN
Sbjct: 70 GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129
Query: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193
P+F+ E L VK+NEN AAG R LP A D DVGVNSL+SYQLS N HFSL V S +G
Sbjct: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189
Query: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253
KYPELVLE LDRE+E +H L+LTA DGGDP+ SGT + VTV DANDNAP+FT EY V
Sbjct: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249
Query: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313
SVPEN+PVGT+LL +TATD DEG NG++TYSFR + FQL+ GEI ++LDY
Sbjct: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309
Query: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373
EE+ FY +E+ A+DGGA +A+AKV++TV+DVNDN+PE+ +TSL S ++ED GTV+AL
Sbjct: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369
Query: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433
+VHD DS +NG++ CSI LPFKLEKS+D+YY L+ R LDRE+ S YNIT+T D G+
Sbjct: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429
Query: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493
PPLSTE+H L+VAD+NDNPP F Q SY T + ENN RG SIFSVTA DPDS +NA++ Y
Sbjct: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489
Query: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553
SLAEDT QG PLSSY+SINSDTGVLYALRSFDYEQ +LQ+ VTASDSG+PPLSSNVSLS
Sbjct: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549
Query: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613
LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLL
Sbjct: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609
Query: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673
KASEPGLFAVG HTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP
Sbjct: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669
Query: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733
+LADLGS ++P + E DLTLYLVVAVAAVSCVFLAFVIVLL RLRRWHKSRLLQA G
Sbjct: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729
Query: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793
L GV SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK++
Sbjct: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789
Query: 794 PLSLLD 799
PL + D
Sbjct: 790 PLLMSD 795
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1127 bits (2915), Expect = 0.0
Identities = 581/783 (74%), Positives = 643/783 (82%)
Query: 18 VLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQ 77
VLL G W A A QI YSIPEELEKGSFVGNI KDLGL P+ELAE GVRIVSRGR Q
Sbjct: 14 VLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQ 73
Query: 78 LFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKF 137
LFSLNPR+GSL+TAGRIDREELCAQS RC+VSFNILVED++ L+ +E+E+ DINDN P+F
Sbjct: 74 LFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRF 133
Query: 138 QAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPE 197
E L+VKI EN A RFPL E DPDVG+NSLQ ++LS N HFS+ VQS A+G KYPE
Sbjct: 134 LKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPE 193
Query: 198 LVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPE 257
LVLE +LDRE EA++ LVLTA DGGDP+RS + VTV D NDN P+FT P YRVSVPE
Sbjct: 194 LVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPE 253
Query: 258 NLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETG 317
NLPVGT +L VTATD+DEG +GEVTYSF K+ + F LN TGEI S NLDYE++
Sbjct: 254 NLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSS 313
Query: 318 FYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHD 377
FYE+ ++A DG AKVLIT+ DVNDN PE+ +TS + E +P GTV+AL V D
Sbjct: 314 FYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFD 373
Query: 378 LDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLS 437
DS NG VTCSI LPF+LEKS+ +YYRLV + ALDRE+V YNITVTATD G+PPLS
Sbjct: 374 RDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLS 433
Query: 438 TEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAE 497
TE L VAD NDNPPTF SY Y+ ENN RGASIFSV ALDPD +NAQ+ YSLAE
Sbjct: 434 TETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAE 493
Query: 498 DTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVL 557
DT+QG PLSSY+SINSDTG+LYALRSFDYEQ +LQ+ VTASDSGDPPLSSNVSLSLFVL
Sbjct: 494 DTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVL 553
Query: 558 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 617
DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE
Sbjct: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
Query: 618 PGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 677
PGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +LA
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILA 673
Query: 678 DLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLT 737
DLGS E A SDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWHKSRLLQASGGGL
Sbjct: 674 DLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLA 733
Query: 738 GVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLSL 797
+ GSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK++PL +
Sbjct: 734 SMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLI 793
Query: 798 LDD 800
D
Sbjct: 794 TQD 796
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 1127 bits (2915), Expect = 0.0
Identities = 581/783 (74%), Positives = 643/783 (82%)
Query: 18 VLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQ 77
VLL G W A A QI YSIPEELEKGSFVGNI KDLGL P+ELAE GVRIVSRGR Q
Sbjct: 14 VLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQ 73
Query: 78 LFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKF 137
LFSLNPR+GSL+TAGRIDREELCAQS RC+VSFNILVED++ L+ +E+E+ DINDN P+F
Sbjct: 74 LFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRF 133
Query: 138 QAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPE 197
E L+VKI EN A RFPL E DPDVG+NSLQ ++LS N HFS+ VQS A+G KYPE
Sbjct: 134 LKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPE 193
Query: 198 LVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPE 257
LVLE +LDRE EA++ LVLTA DGGDP+RS + VTV D NDN P+FT P YRVSVPE
Sbjct: 194 LVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPE 253
Query: 258 NLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETG 317
NLPVGT +L VTATD+DEG +GEVTYSF K+ + F LN TGEI S NLDYE++
Sbjct: 254 NLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSS 313
Query: 318 FYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHD 377
FYE+ ++A DG AKVLIT+ DVNDN PE+ +TS + E +P GTV+AL V D
Sbjct: 314 FYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFD 373
Query: 378 LDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLS 437
DS NG VTCSI LPF+LEKS+ +YYRLV + ALDRE+V YNITVTATD G+PPLS
Sbjct: 374 RDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLS 433
Query: 438 TEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAE 497
TE L VAD NDNPPTF SY Y+ ENN RGASIFSV ALDPD +NAQ+ YSLAE
Sbjct: 434 TETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAE 493
Query: 498 DTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVL 557
DT+QG PLSSY+SINSDTG+LYALRSFDYEQ +LQ+ VTASDSGDPPLSSNVSLSLFVL
Sbjct: 494 DTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVL 553
Query: 558 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 617
DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE
Sbjct: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
Query: 618 PGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 677
PGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +LA
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILA 673
Query: 678 DLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLT 737
DLGS E A SDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWHKSRLLQASGGGL
Sbjct: 674 DLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLA 733
Query: 738 GVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLSL 797
+ GSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK++PL +
Sbjct: 734 SMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLI 793
Query: 798 LDD 800
D
Sbjct: 794 TQD 796
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1123 bits (2905), Expect = 0.0
Identities = 579/800 (72%), Positives = 649/800 (81%), Gaps = 4/800 (0%)
Query: 9 KESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGV 68
K+ CS L+LLCL + EAGA I YS+PEE +KGSFVGNI+KDLGL P+ELA+ GV
Sbjct: 5 KKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGV 64
Query: 69 RIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVT 128
RIVSRGR LF+LNPRSGSLITA RIDREELCAQS C+VSFNILVED++KLF +E+E+
Sbjct: 65 RIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEII 124
Query: 129 DINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQS 188
DINDN P+FQ E L+ K+NE G R LP D DVG+NSLQSYQLS N HFSL VQ
Sbjct: 125 DINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQ 184
Query: 189 RANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTL 248
A+G ++PE+VL+ LDREEEA+HHL+LTASDGG+P+RSGT+ + + V DANDN P FT
Sbjct: 185 GADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQ 244
Query: 249 PEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKIS 308
+Y ++VPEN+P+GTQLL V ATD DEGANGEVTYSF + F+L+ YTGEI
Sbjct: 245 AQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNK 304
Query: 309 ENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGT 368
E LD+EE Y +E+QA+DG +A KVLI V DVNDN+PE+TITS+ + V E+ P GT
Sbjct: 305 EPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGT 364
Query: 369 VVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTA 428
++AL++VHD DS NG TC I LPFKLEK +D+YYRLV R LDRE +S YNIT+TA
Sbjct: 365 IIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITA 424
Query: 429 TDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKEN 488
D G+P LSTE H L V DINDN P F Q SY YIPENN RGASIFSV A D DS EN
Sbjct: 425 IDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNEN 484
Query: 489 AQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSS 548
AQI YSL EDTIQG PLS+Y+SINSDTGVLYALRSFDYEQF ++Q++V A DSGDPPLSS
Sbjct: 485 AQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSS 544
Query: 549 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 608
NVSLSLF+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWL
Sbjct: 545 NVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWL 604
Query: 609 SYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 668
SYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV
Sbjct: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
Query: 669 ADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRL 728
AD I +LADLGS E A SDLTLYLVVA AAVSCVFLAFVIVLLAHRLRRWHKSRL
Sbjct: 665 ADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRL 724
Query: 729 LQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES 788
LQASGGGL + GSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES
Sbjct: 725 LQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES 784
Query: 789 CEK----NDPLSLLDDSKFP 804
CEK + P SLL+D K P
Sbjct: 785 CEKKGFLSAPQSLLEDKKEP 804
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1123 bits (2905), Expect = 0.0
Identities = 579/800 (72%), Positives = 649/800 (81%), Gaps = 4/800 (0%)
Query: 9 KESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGV 68
K+ CS L+LLCL + EAGA I YS+PEE +KGSFVGNI+KDLGL P+ELA+ GV
Sbjct: 5 KKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGV 64
Query: 69 RIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVT 128
RIVSRGR LF+LNPRSGSLITA RIDREELCAQS C+VSFNILVED++KLF +E+E+
Sbjct: 65 RIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEII 124
Query: 129 DINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQS 188
DINDN P+FQ E L+ K+NE G R LP D DVG+NSLQSYQLS N HFSL VQ
Sbjct: 125 DINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQ 184
Query: 189 RANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTL 248
A+G ++PE+VL+ LDREEEA+HHL+LTASDGG+P+RSGT+ + + V DANDN P FT
Sbjct: 185 GADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQ 244
Query: 249 PEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKIS 308
+Y ++VPEN+P+GTQLL V ATD DEGANGEVTYSF + F+L+ YTGEI
Sbjct: 245 AQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNK 304
Query: 309 ENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGT 368
E LD+EE Y +E+QA+DG +A KVLI V DVNDN+PE+TITS+ + V E+ P GT
Sbjct: 305 EPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGT 364
Query: 369 VVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTA 428
++AL++VHD DS NG TC I LPFKLEK +D+YYRLV R LDRE +S YNIT+TA
Sbjct: 365 IIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITA 424
Query: 429 TDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKEN 488
D G+P LSTE H L V DINDN P F Q SY YIPENN RGASIFSV A D DS EN
Sbjct: 425 IDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNEN 484
Query: 489 AQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSS 548
AQI YSL EDTIQG PLS+Y+SINSDTGVLYALRSFDYEQF ++Q++V A DSGDPPLSS
Sbjct: 485 AQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSS 544
Query: 549 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 608
NVSLSLF+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWL
Sbjct: 545 NVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWL 604
Query: 609 SYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 668
SYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV
Sbjct: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
Query: 669 ADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRL 728
AD I +LADLGS E A SDLTLYLVVA AAVSCVFLAFVIVLLAHRLRRWHKSRL
Sbjct: 665 ADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRL 724
Query: 729 LQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES 788
LQASGGGL + GSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES
Sbjct: 725 LQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES 784
Query: 789 CEK----NDPLSLLDDSKFP 804
CEK + P SLL+D K P
Sbjct: 785 CEKKGFLSAPQSLLEDKKEP 804
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1121 bits (2899), Expect = 0.0
Identities = 572/788 (72%), Positives = 646/788 (81%)
Query: 13 DCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVS 72
D + L+ +CL G+ E A QI YS+ EE E+GS VGNI+KDLGLAPRELAERGVRIVS
Sbjct: 9 DHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVS 68
Query: 73 RGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIND 132
RGRTQLF+LNPRSG+L+TAGRIDREELC +S CV + IL+ED VK+ +E+E+ D+ND
Sbjct: 69 RGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVND 128
Query: 133 NAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANG 192
N P F E ++K+ EN G RFPLPEA DPDVGVNSLQ YQL+ N +FSL VQS A+G
Sbjct: 129 NPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADG 188
Query: 193 VKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYR 252
+KYPELVLE +LDREEEA+HHLVLTA DGGDP+RSGT + + + D NDNAPVFT PEY
Sbjct: 189 IKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYH 248
Query: 253 VSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLD 312
VSV EN+PVGT+LLTV ATD DEGANG+VTYSFRK+ D FQLN +G+I I LD
Sbjct: 249 VSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLD 308
Query: 313 YEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVAL 372
YE++GFY+I+++A DG A +KVL+TV D NDN+PE+T+TSL S V E S GTV+AL
Sbjct: 309 YEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIAL 368
Query: 373 LNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGG 432
NVHD DS NG VTCSI LPF LEK+ +YYRL+ HR LDRE+VS YNITVTATD G
Sbjct: 369 FNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQG 428
Query: 433 SPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQII 492
+PPLSTE H LQV DINDNPPTF SY YIPENN RGASI S+TA DPDS +NA+I
Sbjct: 429 TPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARIT 488
Query: 493 YSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSL 552
YSLAEDT QG PLSSY+SINS+TG+LYAL SFDYEQF +LQ+ +TASDSGDPPLSSNVSL
Sbjct: 489 YSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSL 548
Query: 553 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 612
SLFVLDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSL 608
Query: 613 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 672
LK+SEPGLFAVG HTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSI 668
Query: 673 PQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 732
P VLADLGS + A+ + S LTLYLVVAVAAVSCVFLAFV VLLA +LRRWHKSRLL A
Sbjct: 669 PDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAE 728
Query: 733 GGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKN 792
G L GV SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLIS+ESCEK+
Sbjct: 729 GSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISRESCEKS 788
Query: 793 DPLSLLDD 800
+PL + D
Sbjct: 789 EPLLITQD 796
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1121 bits (2899), Expect = 0.0
Identities = 572/788 (72%), Positives = 646/788 (81%)
Query: 13 DCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVS 72
D + L+ +CL G+ E A QI YS+ EE E+GS VGNI+KDLGLAPRELAERGVRIVS
Sbjct: 9 DHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVS 68
Query: 73 RGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIND 132
RGRTQLF+LNPRSG+L+TAGRIDREELC +S CV + IL+ED VK+ +E+E+ D+ND
Sbjct: 69 RGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVND 128
Query: 133 NAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANG 192
N P F E ++K+ EN G RFPLPEA DPDVGVNSLQ YQL+ N +FSL VQS A+G
Sbjct: 129 NPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADG 188
Query: 193 VKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYR 252
+KYPELVLE +LDREEEA+HHLVLTA DGGDP+RSGT + + + D NDNAPVFT PEY
Sbjct: 189 IKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYH 248
Query: 253 VSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLD 312
VSV EN+PVGT+LLTV ATD DEGANG+VTYSFRK+ D FQLN +G+I I LD
Sbjct: 249 VSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLD 308
Query: 313 YEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVAL 372
YE++GFY+I+++A DG A +KVL+TV D NDN+PE+T+TSL S V E S GTV+AL
Sbjct: 309 YEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIAL 368
Query: 373 LNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGG 432
NVHD DS NG VTCSI LPF LEK+ +YYRL+ HR LDRE+VS YNITVTATD G
Sbjct: 369 FNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQG 428
Query: 433 SPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQII 492
+PPLSTE H LQV DINDNPPTF SY YIPENN RGASI S+TA DPDS +NA+I
Sbjct: 429 TPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARIT 488
Query: 493 YSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSL 552
YSLAEDT QG PLSSY+SINS+TG+LYAL SFDYEQF +LQ+ +TASDSGDPPLSSNVSL
Sbjct: 489 YSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSL 548
Query: 553 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 612
SLFVLDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSL 608
Query: 613 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 672
LK+SEPGLFAVG HTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSI 668
Query: 673 PQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 732
P VLADLGS + A+ + S LTLYLVVAVAAVSCVFLAFV VLLA +LRRWHKSRLL A
Sbjct: 669 PDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAE 728
Query: 733 GGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKN 792
G L GV SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLIS+ESCEK+
Sbjct: 729 GSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISRESCEKS 788
Query: 793 DPLSLLDD 800
+PL + D
Sbjct: 789 EPLLITQD 796
>gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precursor
[Homo sapiens]
Length = 750
Score = 848 bits (2190), Expect = 0.0
Identities = 424/624 (67%), Positives = 500/624 (80%)
Query: 6 NRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAE 65
NR + L+LLC+F G ARQI YS+PEE EKGSFVGNISKDLGL PRELA+
Sbjct: 3 NRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAK 62
Query: 66 RGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEI 125
RGVRIVSRG+TQLF++NPRSGSLITAGRIDREELC + C ++ +LVED +K++G+E+
Sbjct: 63 RGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEV 122
Query: 126 EVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLR 185
E+ DINDNAP FQ + +++K++E+ G RF LP A DPDVGVNSLQSYQLSPN +FSL+
Sbjct: 123 EIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQ 182
Query: 186 VQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPV 245
++ R +G K PELVLE SLDRE+EA H L+LTA DGGDP+R G V + V V D ND+ P+
Sbjct: 183 LRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPM 242
Query: 246 FTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEI 305
FT YRVSVPEN+ GT++L V ATD DEG NGEV YSFR + FQL+ TGE+
Sbjct: 243 FTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEV 302
Query: 306 KISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSP 365
++ +LD+E+ FYE+EIQ +DGG T +LITV DVNDN+PE+TITS + + E+SP
Sbjct: 303 QVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSP 362
Query: 366 LGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNIT 425
GTV+ALLNV D DS +NGQV+C I +LPFKLEK+ +YY+L+ R LDRE V SYNIT
Sbjct: 363 PGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNIT 422
Query: 426 VTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDS 485
+TATD GSPPLS E H L VAD NDNPP F SY YIPENN RGASIFSVTALDPDS
Sbjct: 423 LTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDS 482
Query: 486 KENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPP 545
K+NA + YSL +DT+QGVPLSSY+SINS+TGVLYAL+SFDYEQF +L+++V A DSGDPP
Sbjct: 483 KQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPP 542
Query: 546 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 605
LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 543 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQN 602
Query: 606 AWLSYRLLKASEPGLFAVGEHTGE 629
AWLSYRLLKASEPGLFAVGEHTGE
Sbjct: 603 AWLSYRLLKASEPGLFAVGEHTGE 626
Score = 149 bits (376), Expect = 1e-35
Identities = 152/544 (27%), Positives = 224/544 (41%), Gaps = 72/544 (13%)
Query: 232 VSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDT 291
V V + D NDNAP F E + V E+ G + A D D G N +Y +L
Sbjct: 120 VEVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSY---QLSPN 176
Query: 292 QLLKFQLNKYTG-----EIKISENLDYEETGFYEIEIQAEDGGAYL--ATAKVLITVEDV 344
QL T E+ + +LD E+ + + + A DGG + + + V DV
Sbjct: 177 NYFSLQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDV 236
Query: 345 NDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDS 404
ND+ P T + V E+ GT V ++N D D NG+V S +E
Sbjct: 237 NDHIPMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFR-----NMESKASE 291
Query: 405 YYRL-------VIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFS 457
++L + +LD E+ Y + + DGG L T ++ V D+NDN P +
Sbjct: 292 IFQLDSQTGEVQVRGSLDFEKYRFYEMEIQGQDGGG--LFTTTTMLITVVDVNDNAPEIT 349
Query: 458 QVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGV 517
S I EN+ G I + D DS EN Q+ +P + G
Sbjct: 350 ITSSINSILENSPPGTVIALLNVQDQDSGENGQVSCF--------IPNHLPFKLEKTYGN 401
Query: 518 LYAL---RSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTD 574
Y L R D E + +TA+D G PPLS+ + L V D NDN P ++P
Sbjct: 402 YYKLITSRVLDRELVQSYNITLTATDQGSPPLSAETHVWLNVADDNDNPP--VFPH---- 455
Query: 575 GSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGL-----FAVGEHTGE 629
S+ P + G + V A+D DS QNA ++Y L + G+ ++ +TG
Sbjct: 456 -SSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGV 514
Query: 630 VRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA---DSIPQVL-------ADL 679
+ ++ L V +D G PPLS+ V+L++ V D+ P++L
Sbjct: 515 LYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGST 574
Query: 680 GSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGV 739
G +P ++E YLV V AV W RLL+AS GL V
Sbjct: 575 GVELAPRSAEPG----YLVTKVVAVD----------KDSGQNAWLSYRLLKASEPGLFAV 620
Query: 740 SGSH 743
G H
Sbjct: 621 -GEH 623
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 672 bits (1735), Expect = 0.0
Identities = 345/708 (48%), Positives = 476/708 (67%), Gaps = 3/708 (0%)
Query: 34 QISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSLNPRSGSLITAGR 93
QI YSIPEEL K S VGN++KDLGL+ R+L R +R+ + + F++NP SG L+ + R
Sbjct: 32 QIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KEYFTVNPESGDLLVSDR 89
Query: 94 IDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAENLDVKINENVAAG 153
IDRE++C + CV+ F+ + E+ + +F I + V DINDN P F+ +++KI E+ G
Sbjct: 90 IDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPG 149
Query: 154 MRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLEHSLDREEEAIHH 213
FPL A+D DVG NSLQ Y L+ N++F L + +G KYPEL+L+HSLDREE ++H
Sbjct: 150 TTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSLDREEHSLHQ 209
Query: 214 LVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLTVTATDR 273
LVLTA DGGDP +SGT + + V DANDN PVF+ YRV++ E++P G +L VTATDR
Sbjct: 210 LVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDR 269
Query: 274 DEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEIEIQAEDGGAYLA 333
DEG N E+TYSF + + F LN+ TGEI ++LD+E Y + I+A+D G A
Sbjct: 270 DEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIEAKDPGDLAA 329
Query: 334 TAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVTCSILAY 393
+ + + D ND +PE+ +TS+ +P+ EDSP GTV+AL+ D DS +NG+V C +L
Sbjct: 330 HCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGN 389
Query: 394 LPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVADINDNP 453
F L+ S +YY+LV ALDRE++ YN+T+TATDGG PPLS+ L ++D+NDN
Sbjct: 390 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNA 449
Query: 454 PTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSSYISINS 513
P F Q SY ++ ENN GASI ++A DPD + Q+ YS+ ++ + SY+S+++
Sbjct: 450 PVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPREILSYVSVSA 509
Query: 514 DTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPT 573
+GV++A R+FD+EQ ++ + A D G P LS+NVSL + V D NDNAP +LYPAL
Sbjct: 510 QSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGP 569
Query: 574 DGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTA 633
DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASEPGLF++G TGEVRTA
Sbjct: 570 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 629
Query: 634 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSFESPANSETSDL 693
RAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ +VL DL P++ + + L
Sbjct: 630 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPSDPQ-AKL 688
Query: 694 TLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG 741
YLVVA+A +S +F VI+ ++ RLR +S GL+ G
Sbjct: 689 QFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGLSSKPG 736
>gi|14270490 protocadherin gamma subfamily B, 1 isoform 2 precursor
[Homo sapiens]
Length = 810
Score = 672 bits (1735), Expect = 0.0
Identities = 359/741 (48%), Positives = 488/741 (65%), Gaps = 8/741 (1%)
Query: 7 RSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAER 66
R++E++ VL + A ++QI Y+IPEEL GS VG ++KDLGL+ REL R
Sbjct: 3 RAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTR 62
Query: 67 GVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIE 126
+R+ + F+++ SG L+ GRIDRE++C + C + F + E+ + +F + +
Sbjct: 63 KLRVSAE---DYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVV 119
Query: 127 VTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRV 186
+ DINDNAP+F A+ +D++I E+ G++F L A D DV NSL+ Y ++PN++FSL
Sbjct: 120 IQDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLST 179
Query: 187 QSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVF 246
+ +G KYP L+LE LDRE ++ H L+LTA DGGDP SGT + + V DANDNAPVF
Sbjct: 180 KESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVF 239
Query: 247 TLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIK 306
+ YRVS+ EN+P GT +L V ATD+DEG N E+TY+F P + L F LN TG+I
Sbjct: 240 SQEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSL-FNLNPNTGDIT 298
Query: 307 ISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPL 366
+ LD+EET Y + ++A+DGG + A V I + D NDN+PE+T S + + EDS L
Sbjct: 299 TNGTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDL 358
Query: 367 GTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITV 426
GTV+AL+ V D DS QNG VTC +PFKLE + +YY+LVI AL+REQ + YN+T+
Sbjct: 359 GTVIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTI 418
Query: 427 TATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSK 486
ATD G P LS+ L ++DINDN P F Q SY ++ ENN GASI V+A DPD
Sbjct: 419 IATDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLG 478
Query: 487 ENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPL 546
N ++ YS+ ++ L SY+S++ +GV++A R+FD+EQ ++ + A D G P L
Sbjct: 479 PNGRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPAL 538
Query: 547 SSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNA 606
S+NVSL + V D NDNAP +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NA
Sbjct: 539 SANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNA 598
Query: 607 WLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 666
WLSY +L+ASEPGLF++G TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +
Sbjct: 599 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL 658
Query: 667 AVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKS 726
ADS+ +VL DL P++ +T +L YLVVA+A +S +FL VI+ +A RLRR S
Sbjct: 659 IFADSLQEVLPDLSDRPEPSDPQT-ELQFYLVVALALISVLFLLAVILAIALRLRR---S 714
Query: 727 RLLQASGGGLTGVSGSHFVGV 747
L G TG+ GV
Sbjct: 715 SSLDTEGCFQTGLCSKSGPGV 735
>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
[Homo sapiens]
Length = 927
Score = 672 bits (1735), Expect = 0.0
Identities = 359/741 (48%), Positives = 488/741 (65%), Gaps = 8/741 (1%)
Query: 7 RSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAER 66
R++E++ VL + A ++QI Y+IPEEL GS VG ++KDLGL+ REL R
Sbjct: 3 RAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTR 62
Query: 67 GVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIE 126
+R+ + F+++ SG L+ GRIDRE++C + C + F + E+ + +F + +
Sbjct: 63 KLRVSAE---DYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVV 119
Query: 127 VTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRV 186
+ DINDNAP+F A+ +D++I E+ G++F L A D DV NSL+ Y ++PN++FSL
Sbjct: 120 IQDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLST 179
Query: 187 QSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVF 246
+ +G KYP L+LE LDRE ++ H L+LTA DGGDP SGT + + V DANDNAPVF
Sbjct: 180 KESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVF 239
Query: 247 TLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIK 306
+ YRVS+ EN+P GT +L V ATD+DEG N E+TY+F P + L F LN TG+I
Sbjct: 240 SQEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSL-FNLNPNTGDIT 298
Query: 307 ISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPL 366
+ LD+EET Y + ++A+DGG + A V I + D NDN+PE+T S + + EDS L
Sbjct: 299 TNGTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDL 358
Query: 367 GTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITV 426
GTV+AL+ V D DS QNG VTC +PFKLE + +YY+LVI AL+REQ + YN+T+
Sbjct: 359 GTVIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTI 418
Query: 427 TATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSK 486
ATD G P LS+ L ++DINDN P F Q SY ++ ENN GASI V+A DPD
Sbjct: 419 IATDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLG 478
Query: 487 ENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPL 546
N ++ YS+ ++ L SY+S++ +GV++A R+FD+EQ ++ + A D G P L
Sbjct: 479 PNGRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPAL 538
Query: 547 SSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNA 606
S+NVSL + V D NDNAP +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NA
Sbjct: 539 SANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNA 598
Query: 607 WLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 666
WLSY +L+ASEPGLF++G TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +
Sbjct: 599 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL 658
Query: 667 AVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKS 726
ADS+ +VL DL P++ +T +L YLVVA+A +S +FL VI+ +A RLRR S
Sbjct: 659 IFADSLQEVLPDLSDRPEPSDPQT-ELQFYLVVALALISVLFLLAVILAIALRLRR---S 714
Query: 727 RLLQASGGGLTGVSGSHFVGV 747
L G TG+ GV
Sbjct: 715 SSLDTEGCFQTGLCSKSGPGV 735
>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
[Homo sapiens]
Length = 811
Score = 672 bits (1735), Expect = 0.0
Identities = 345/708 (48%), Positives = 476/708 (67%), Gaps = 3/708 (0%)
Query: 34 QISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSLNPRSGSLITAGR 93
QI YSIPEEL K S VGN++KDLGL+ R+L R +R+ + + F++NP SG L+ + R
Sbjct: 32 QIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KEYFTVNPESGDLLVSDR 89
Query: 94 IDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAENLDVKINENVAAG 153
IDRE++C + CV+ F+ + E+ + +F I + V DINDN P F+ +++KI E+ G
Sbjct: 90 IDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPG 149
Query: 154 MRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLEHSLDREEEAIHH 213
FPL A+D DVG NSLQ Y L+ N++F L + +G KYPEL+L+HSLDREE ++H
Sbjct: 150 TTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSLDREEHSLHQ 209
Query: 214 LVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLTVTATDR 273
LVLTA DGGDP +SGT + + V DANDN PVF+ YRV++ E++P G +L VTATDR
Sbjct: 210 LVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDR 269
Query: 274 DEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEIEIQAEDGGAYLA 333
DEG N E+TYSF + + F LN+ TGEI ++LD+E Y + I+A+D G A
Sbjct: 270 DEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIEAKDPGDLAA 329
Query: 334 TAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVTCSILAY 393
+ + + D ND +PE+ +TS+ +P+ EDSP GTV+AL+ D DS +NG+V C +L
Sbjct: 330 HCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGN 389
Query: 394 LPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVADINDNP 453
F L+ S +YY+LV ALDRE++ YN+T+TATDGG PPLS+ L ++D+NDN
Sbjct: 390 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNA 449
Query: 454 PTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSSYISINS 513
P F Q SY ++ ENN GASI ++A DPD + Q+ YS+ ++ + SY+S+++
Sbjct: 450 PVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPREILSYVSVSA 509
Query: 514 DTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPT 573
+GV++A R+FD+EQ ++ + A D G P LS+NVSL + V D NDNAP +LYPAL
Sbjct: 510 QSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGP 569
Query: 574 DGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTA 633
DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASEPGLF++G TGEVRTA
Sbjct: 570 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 629
Query: 634 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSFESPANSETSDL 693
RAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ +VL DL P++ + + L
Sbjct: 630 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPSDPQ-AKL 688
Query: 694 TLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSG 741
YLVVA+A +S +F VI+ ++ RLR +S GL+ G
Sbjct: 689 QFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGLSSKPG 736
>gi|14270508 protocadherin gamma subfamily B, 7 isoform 2 precursor
[Homo sapiens]
Length = 808
Score = 672 bits (1734), Expect = 0.0
Identities = 348/720 (48%), Positives = 485/720 (67%), Gaps = 8/720 (1%)
Query: 3 AQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRE 62
AQR R+ + VL L + + I YSIPEEL KGS VGN++KDLGL+ +
Sbjct: 6 AQRRRAGPRQ-----VLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLD 60
Query: 63 LAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFG 122
++ R +R+ + FS++ +SG L+ RIDRE++C + RC + +VE+ + +F
Sbjct: 61 VSARELRVSAEKLH--FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFH 118
Query: 123 IEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHF 182
+ + + D+ND+AP+F+ + ++++I+E+V+ GM L A DPD+ +NSL YQLSPN++F
Sbjct: 119 VIVVIEDVNDHAPQFRKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYF 178
Query: 183 SLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDN 242
SL + +G KYPELVL+ +LDRE ++ HHLVLTA DGGDP RSGT + + V DANDN
Sbjct: 179 SLVEKDNPDGGKYPELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDN 238
Query: 243 APVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYT 302
PVF+ YRVS+ E++P GT +L V ATD+DEG N E+TYSF + D F L+ T
Sbjct: 239 PPVFSQDVYRVSLREDVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTT 298
Query: 303 GEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTE 362
G I + LD+EE Y I I+A+D G+ KV++ V D NDNSPE+ ITSL + E
Sbjct: 299 GNILTQQPLDFEEVERYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIME 358
Query: 363 DSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSY 422
DSP G VVAL D DS +NG+V CS+ +PFK+ S ++YY+LV ALDREQ Y
Sbjct: 359 DSPPGVVVALFKTRDQDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEY 418
Query: 423 NITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALD 482
N+T+ ATD G PPLS+ L + D+NDN P F Q +Y ++PENN GASI V+A D
Sbjct: 419 NVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASD 478
Query: 483 PDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSG 542
PD N ++ YSL ++ LSSY+S+++ +GV++A R+FD+EQ ++ + A D G
Sbjct: 479 PDFGLNGRVSYSLIASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQG 538
Query: 543 DPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDS 602
P LS+NVSL + V D+NDNAP +LYPAL DGS + PR+A+PGYLVTKVVAVD DS
Sbjct: 539 SPALSANVSLRVLVGDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADS 598
Query: 603 GQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATV 662
G NAWLSY +++ASEPGLF++G TGEVR RAL D+D+++Q L+VAV+D GQPPLSAT
Sbjct: 599 GHNAWLSYHVVQASEPGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATA 658
Query: 663 TLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRR 722
TL + ADS+ +VL D +P++S+ +++ YLVVA+A +S +FL VI+ +A RLR+
Sbjct: 659 TLHLVFADSLQEVLPDFSDHPTPSDSQ-AEMQFYLVVALALISVLFLLAVILAIALRLRQ 717
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,639,096
Number of Sequences: 37866
Number of extensions: 1362475
Number of successful extensions: 10299
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2926
Number of HSP's gapped (non-prelim): 661
length of query: 850
length of database: 18,247,518
effective HSP length: 111
effective length of query: 739
effective length of database: 14,044,392
effective search space: 10378805688
effective search space used: 10378805688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.