PCDHGA11 3853

Name: PCDHGA11	Sequence: fasta or formatted (750aa)		NCBI GI: 14196455
Description: protocadherin gamma subfamily A, 11 isoform 3 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [935aa] protocadherin gamma subfamily A, 11 isoform 1 precursor alt prot [837aa] protocadherin gamma subfamily A, 11 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 50 2 C cysteine 0.5 4 1 D aspartate 6.5 49 2 E glutamate 6.3 47 2 F phenylalanine 3.3 25 1 G glycine 8.3 62 3 H histidine 1.1 8 1 I isoleucine 4.7 35 2 K lysine 3.6 27 3 L leucine 9.9 74 5 M methionine 1.5 11 1 N asparagine 6.1 46 2 P proline 5.9 44 2 Q glutamine 4.4 33 1 R arginine 5.3 40 1 S serine 8.9 67 2 T threonine 6.0 45 4 V valine 7.3 55 3 W tryptophan 0.5 4 1 Y tyrosine 3.2 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin gamma subfamily A, 11 isoform 3 precur... PCDHGA11 0.826 protocadherin gamma subfamily A, 11 isoform 2 precur... PCDHGA11 0.826 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA12 0.574 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.574 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGA8 0.565 protocadherin gamma subfamily A, 8 isoform 1 precurs... PCDHGA8 0.565 protocadherin gamma subfamily A, 8 isoform 2 precurso... PCDHGA4 0.563 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA4 0.563 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA10 0.563 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA10 0.563 protocadherin gamma subfamily A, 10 isoform 2 precur... PCDHGA5 0.559 protocadherin gamma subfamily A, 5 isoform 2 precurs... PCDHGA5 0.559 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA1 0.553 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGA1 0.553 protocadherin gamma subfamily A, 1 isoform 2 precurs... PCDHGA3 0.551 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA3 0.551 protocadherin gamma subfamily A, 3 isoform 2 precurs... PCDHGA6 0.549 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA6 0.549 protocadherin gamma subfamily A, 6 isoform 2 precurs... PCDHGA7 0.545 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA7 0.545 protocadherin gamma subfamily A, 7 isoform 2 precurs... PCDHGA9 0.538 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA9 0.538 protocadherin gamma subfamily A, 9 isoform 2 precurs... PCDHGA2 0.528 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA2 0.528 protocadherin gamma subfamily A, 2 isoform 2 precurs... PCDHGB7 0.402 protocadherin gamma subfamily B, 7 isoform 2 precurs... PCDHGB7 0.402 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGB5 0.394 protocadherin gamma subfamily B, 5 isoform 2 precurs... PCDHGB5 0.394 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGB6 0.390 protocadherin gamma subfamily B, 6 isoform 1 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.