PCDHGB1 883

Name: PCDHGB1	Sequence: fasta or formatted (927aa)		NCBI GI: 11128037
Description: protocadherin gamma subfamily B, 1 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [810aa] protocadherin gamma subfamily B, 1 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 81 2 C cysteine 1.2 11 1 D aspartate 6.7 62 2 E glutamate 5.6 52 2 F phenylalanine 3.2 30 1 G glycine 6.9 64 3 H histidine 1.9 18 1 I isoleucine 4.1 38 2 K lysine 3.6 33 3 L leucine 10.5 97 3 M methionine 1.5 14 2 N asparagine 5.4 50 2 P proline 6.1 57 2 Q glutamine 4.3 40 2 R arginine 4.7 44 2 S serine 9.4 87 3 T threonine 5.5 51 2 V valine 7.3 68 4 W tryptophan 0.5 5 1 Y tyrosine 2.7 25 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDHGB1 0.860 protocadherin gamma subfamily B, 1 isoform 2 precurs... PCDHGB2 0.736 protocadherin gamma subfamily B, 2 isoform 1 precurs... PCDHGB5 0.718 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGB4 0.714 protocadherin gamma subfamily B, 4 isoform 1 precurs... PCDHGB6 0.697 protocadherin gamma subfamily B, 6 isoform 1 precurs... PCDHGB3 0.691 protocadherin gamma subfamily B, 3 isoform 1 precurs... PCDHGB7 0.687 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGB2 0.600 protocadherin gamma subfamily B, 2 isoform 2 precurs... PCDHGB5 0.582 protocadherin gamma subfamily B, 5 isoform 2 precurs... PCDHGB4 0.578 protocadherin gamma subfamily B, 4 isoform 2 precurs... PCDHGB6 0.559 protocadherin gamma subfamily B, 6 isoform 2 precurs... PCDHGB3 0.553 protocadherin gamma subfamily B, 3 isoform 2 precurs... PCDHGB7 0.548 protocadherin gamma subfamily B, 7 isoform 2 precurs... PCDHGA5 0.496 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA12 0.494 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA10 0.494 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA7 0.492 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA11 0.491 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA6 0.490 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA2 0.488 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA9 0.487 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA3 0.484 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA4 0.484 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA1 0.480 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGA8 0.476 protocadherin gamma subfamily A, 8 isoform 1 precurs... PCDHGC5 0.453 protocadherin gamma subfamily C, 5 isoform 1 precurs... PCDHGC3 0.440 protocadherin gamma subfamily C, 3 isoform 1 precurs... PCDHGC4 0.438 protocadherin gamma subfamily C, 4 isoform 1 precurs... PCDHGA5 0.361 protocadherin gamma subfamily A, 5 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.