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Search of human proteins with 9910270
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9910270 olfactomedin-like 3 [Homo sapiens]
(406 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9910270 olfactomedin-like 3 [Homo sapiens] 833 0.0
gi|38348264 olfactomedin-like 1 [Homo sapiens] 239 2e-63
gi|17136143 olfactomedin related ER localized protein isoform 1 ... 145 8e-35
gi|17157993 olfactomedin 2 [Homo sapiens] 132 6e-31
gi|166706897 olfactomedin 3 [Homo sapiens] 127 1e-29
gi|6912464 latrophilin 2 precursor [Homo sapiens] 125 7e-29
gi|4557779 myocilin [Homo sapiens] 125 9e-29
gi|46195719 olfactomedin-like 2B [Homo sapiens] 121 1e-27
gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens] 120 2e-27
gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens] 120 2e-27
gi|163792198 latrophilin 3 precursor [Homo sapiens] 118 1e-26
gi|116014339 olfactomedin-like 2A [Homo sapiens] 117 2e-26
gi|98986321 gliomedin [Homo sapiens] 81 2e-15
gi|32313593 olfactomedin 4 precursor [Homo sapiens] 75 1e-13
gi|7710152 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos... 39 0.006
gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens] 39 0.011
gi|31982906 cingulin-like 1 [Homo sapiens] 36 0.071
gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens] 35 0.093
gi|169215514 PREDICTED: hypothetical protein [Homo sapiens] 34 0.21
gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens] 34 0.21
gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens] 34 0.21
gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens] 34 0.21
gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens] 34 0.21
gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo s... 34 0.21
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 34 0.27
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 34 0.27
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 34 0.27
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 34 0.27
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 33 0.35
gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo ... 33 0.35
>gi|9910270 olfactomedin-like 3 [Homo sapiens]
Length = 406
Score = 833 bits (2152), Expect = 0.0
Identities = 406/406 (100%), Positives = 406/406 (100%)
Query: 1 MGPSTPLLILFLLSWSGPLQGQQHHLVEYMERRLAALEERLAQCQDQSSRHAAELRDFKN 60
MGPSTPLLILFLLSWSGPLQGQQHHLVEYMERRLAALEERLAQCQDQSSRHAAELRDFKN
Sbjct: 1 MGPSTPLLILFLLSWSGPLQGQQHHLVEYMERRLAALEERLAQCQDQSSRHAAELRDFKN 60
Query: 61 KMLPLLEVAEKEREALRTEADTISGRVDRLEREVDYLETQNPALPCVEFDEKVTGGPGTK 120
KMLPLLEVAEKEREALRTEADTISGRVDRLEREVDYLETQNPALPCVEFDEKVTGGPGTK
Sbjct: 61 KMLPLLEVAEKEREALRTEADTISGRVDRLEREVDYLETQNPALPCVEFDEKVTGGPGTK 120
Query: 121 GKGRRNEKYDMVTDCGYTISQVRSMKILKRFGGPAGLWTKDPLGQTEKIYVLDGTQNDTA 180
GKGRRNEKYDMVTDCGYTISQVRSMKILKRFGGPAGLWTKDPLGQTEKIYVLDGTQNDTA
Sbjct: 121 GKGRRNEKYDMVTDCGYTISQVRSMKILKRFGGPAGLWTKDPLGQTEKIYVLDGTQNDTA 180
Query: 181 FVFPRLRDFTLAMAARKASRVRVPFPWVGTGQLVYGGFLYFARRPPGRPGGGGEMENTLQ 240
FVFPRLRDFTLAMAARKASRVRVPFPWVGTGQLVYGGFLYFARRPPGRPGGGGEMENTLQ
Sbjct: 181 FVFPRLRDFTLAMAARKASRVRVPFPWVGTGQLVYGGFLYFARRPPGRPGGGGEMENTLQ 240
Query: 241 LIKFHLANRTVVDSSVFPAEGLIPPYGLTADTYIDLAADEEGLWAVYATREDDRHLCLAK 300
LIKFHLANRTVVDSSVFPAEGLIPPYGLTADTYIDLAADEEGLWAVYATREDDRHLCLAK
Sbjct: 241 LIKFHLANRTVVDSSVFPAEGLIPPYGLTADTYIDLAADEEGLWAVYATREDDRHLCLAK 300
Query: 301 LDPQTLDTEQQWDTPCPRENAEAAFVICGTLYVVYNTRPASRARIQCSFDASGTLTPERA 360
LDPQTLDTEQQWDTPCPRENAEAAFVICGTLYVVYNTRPASRARIQCSFDASGTLTPERA
Sbjct: 301 LDPQTLDTEQQWDTPCPRENAEAAFVICGTLYVVYNTRPASRARIQCSFDASGTLTPERA 360
Query: 361 ALPYFPRRYGAHASLRYNPRERQLYAWDDGYQIVYKLEMRKKEEEV 406
ALPYFPRRYGAHASLRYNPRERQLYAWDDGYQIVYKLEMRKKEEEV
Sbjct: 361 ALPYFPRRYGAHASLRYNPRERQLYAWDDGYQIVYKLEMRKKEEEV 406
>gi|38348264 olfactomedin-like 1 [Homo sapiens]
Length = 402
Score = 239 bits (611), Expect = 2e-63
Identities = 130/402 (32%), Positives = 218/402 (54%), Gaps = 14/402 (3%)
Query: 4 STPLLILFLLSWSGPLQ-GQQHHLVEYMERRLAALEERLAQCQDQSSRHAAELRDFKNKM 62
++ LL+LFL ++ P Q Q +V Y+ +R LE+ L +C + + E ++F +
Sbjct: 8 ASALLVLFLAAFLPPPQCTQDPAMVHYIYQRFRVLEQGLEKCTQATRAYIQEFQEFSKNI 67
Query: 63 LPLLEVAEKEREALRTEADTISGRVDRLEREVDYLETQNPALPCVEFDEKVTGGP-GTKG 121
+L + ++ ++ RV+R +RE+DY++ A C+ ++K +
Sbjct: 68 SVMLGRCQTYTSEYKSAVGNLALRVERAQREIDYIQYLREADECIVSEDKTLAEMLLQEA 127
Query: 122 KGRRNEKYDMVTDCGYTISQVRSMKILKRFGGPAGLWTKDPLGQTEKIYVLDGTQNDTAF 181
+ + + + C + ++S+KI+K+ G W KD + + K+Y+L G++N+T +
Sbjct: 128 EEEKKIRTLLNASCDNMLMGIKSLKIVKKMMDTHGSWMKDAVYNSPKVYLLIGSRNNTVW 187
Query: 182 VFPRLRDFTLAMAARKASRVRVPFPWVGTGQLVYGGFLYFARRPPGRPGGGGEMENTLQL 241
F +R F + + W GTGQ++Y GFL+F + ++
Sbjct: 188 EFANIRAFMEDNTKPAPRKQILTLSWQGTGQVIYKGFLFFHNQATSN-----------EI 236
Query: 242 IKFHLANRTVVDSSVFP-AEGLIPPYGLTADTYIDLAADEEGLWAVYATREDDRHLCLAK 300
IK++L RTV D + P G Y + TYIDLA DE GLWA+++ HL L K
Sbjct: 237 IKYNLQKRTVEDRMLLPGGVGRALVYQHSPSTYIDLAVDEHGLWAIHSGPGTHSHLVLTK 296
Query: 301 LDPQTLDTEQQWDTPCPRENAEAAFVICGTLYVVYNTRPASRARIQCSFDASGTLTPERA 360
++P TL E WDTPC ++AEA+F++CG LYVVY+T RI C +D GT++ E
Sbjct: 297 IEPGTLGVEHSWDTPCRSQDAEASFLLCGVLYVVYSTGGQGPHRITCIYDPLGTISEEDL 356
Query: 361 ALPYFPRRYGAHASLRYNPRERQLYAWDDGYQIVYKLEMRKK 402
+FP+R +H+ + YNPR++QLYAW++G QI+YKL+ ++K
Sbjct: 357 PNLFFPKRPRSHSMIHYNPRDKQLYAWNEGNQIIYKLQTKRK 398
>gi|17136143 olfactomedin related ER localized protein isoform 1
[Homo sapiens]
Length = 467
Score = 145 bits (365), Expect = 8e-35
Identities = 116/397 (29%), Positives = 185/397 (46%), Gaps = 66/397 (16%)
Query: 27 VEYMERRLAALEERLAQCQDQSSRHAAELRDFK------NKMLPLLEVAEKERE------ 74
VE ME ++ LE + Q ++ +H A R FK +++ PL+ V E+ +
Sbjct: 104 VEKMENQMKGLESKFKQVEESHKQHLA--RQFKAIKAKMDELRPLIPVLEEYKADAKLVL 161
Query: 75 ALRTEADTISGRVDRLEREV---DYLETQNPALPCVEFDEKVTGGPGTKGKGRRNEKYDM 131
+ E ++ ++ L+ E+ DY E Q+ +E++ G+ D
Sbjct: 162 QFKEEVQNLTSVLNELQEEIGAYDYDELQSRVS---NLEERLRACMQKLACGKLTGISDP 218
Query: 132 VTDCGYTISQVRSMKILKRFGGPAGLWTKDPLGQT--EKIYVLDGTQNDTAFV--FPRLR 187
VT +K G G W DPL +++ +DG N+ FV + +
Sbjct: 219 VT--------------VKTSGSRFGSWMTDPLAPEGDNRVWYMDGYHNNR-FVREYKSMV 263
Query: 188 DFTLAMAARKASRVRVPFPWVGTGQLVYGGFLYFARRPPGRPGGGGEMENTLQ---LIKF 244
DF M + R+P PW GTGQ+VY G +YF N Q +I+F
Sbjct: 264 DF---MNTDNFTSHRLPHPWSGTGQVVYNGSIYF---------------NKFQSHIIIRF 305
Query: 245 HLANRTVVDSSVFPAEGL--IPPYGLTADTYIDLAADEEGLWAVYATREDDRHLCLAKLD 302
L T++ + G + Y + IDL DE GLWAVYAT ++ ++ +++LD
Sbjct: 306 DLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDESGLWAVYATNQNAGNIVVSRLD 365
Query: 303 PQTLDTEQQWDTPCPRENAEAAFVICGTLYVVYNTRPASRARIQCSFDASGTLTPERAAL 362
P +L T Q W+T P+ +A AF+ICGTLYV ++ +AS T E +
Sbjct: 366 PVSLQTLQTWNTSYPKRSAGEAFIICGTLYVTNGYSGGTKVHYAYQTNAS---TYEYIDI 422
Query: 363 PYFPRRYGAHASLRYNPRERQLYAWDDGYQIVYKLEM 399
P F +Y + L YNP++R LYAW++G+QI+Y + +
Sbjct: 423 P-FQNKYSHISMLDYNPKDRALYAWNNGHQILYNVTL 458
>gi|17157993 olfactomedin 2 [Homo sapiens]
Length = 454
Score = 132 bits (332), Expect = 6e-31
Identities = 104/385 (27%), Positives = 181/385 (47%), Gaps = 45/385 (11%)
Query: 27 VEYMERRLAALEERLAQCQDQ-SSRHAAELRDFKNKMLPLLEVAEKEREALRT------E 79
V ME + +L+ RL S++ EL+D ++LPL V E+ + RT E
Sbjct: 93 VRGMETLMRSLDARLRAADGSLSAKSFQELKDRMTELLPLSSVLEQYKADTRTIVRLREE 152
Query: 80 ADTISGRVDRLEREVDYLETQNPALPCVEFDEKVTGGPGTKGKGRRNEKYDMVTDCGYTI 139
+SG + ++ E+ ++ + + ++ G G+ + +T
Sbjct: 153 VRNLSGSLAAIQEEMGAYGYEDLQQRVMALEARLHACAQKLGCGKLTGVSNPIT------ 206
Query: 140 SQVRSMKILKRFGGPAGLWTKDPLGQT--EKIYVLDGTQNDTAFV-FPRLRDFTLAMAAR 196
VR+M G G W D + + +++ +DG + F L DF + +
Sbjct: 207 --VRAM------GSRFGSWMTDTMAPSADSRVWYMDGYYKGRRVLEFRTLGDF---IKGQ 255
Query: 197 KASRVRVPFPWVGTGQLVYGGFLYFARRPPGRPGGGGEMENTLQLIKFHLANRTVVDSSV 256
+ +P PW GTG +VY G L++ + ++K+H +R+V+
Sbjct: 256 NFIQHLLPQPWAGTGHVVYNGSLFYNKYQSN------------VVVKYHFRSRSVLVQRS 303
Query: 257 FPAEGLIP--PYGLTADTYIDLAADEEGLWAVYATREDDRHLCLAKLDPQTLDTEQQWDT 314
P G PY + +D DE GLWAVY T ++ ++ +++LDP TL+ + WDT
Sbjct: 304 LPGAGYNNTFPYSWGGFSDMDFMVDESGLWAVYTTNQNAGNIVVSRLDPHTLEVMRSWDT 363
Query: 315 PCPRENAEAAFVICGTLYVVYNTRPASRARIQCSFDASGTLTPERAALPYFPRRYGAHAS 374
P+ +A AF+ICG LYV N+ A A++ ++ + T + E +P F +Y +
Sbjct: 364 GYPKRSAGEAFMICGVLYVT-NSHLAG-AKVYFAY-FTNTSSYEYTDVP-FHNQYSHISM 419
Query: 375 LRYNPRERQLYAWDDGYQIVYKLEM 399
L YNPRER LY W++G+Q++Y + +
Sbjct: 420 LDYNPRERALYTWNNGHQVLYNVTL 444
>gi|166706897 olfactomedin 3 [Homo sapiens]
Length = 458
Score = 127 bits (320), Expect = 1e-29
Identities = 101/382 (26%), Positives = 178/382 (46%), Gaps = 42/382 (10%)
Query: 30 MERRLAALEERLAQCQDQS----SRHAAELRDFKNKMLPLLEVAEKEREALRTEADTISG 85
ME ++ L+ + Q +D ++H EL++ +++LPL+ V E+ +T+A I+
Sbjct: 97 METQMKGLKAKFRQIEDDRKTLMTKHFQELKEKMDELLPLIPVLEQ----YKTDAKLITQ 152
Query: 86 RVDRLEREVDYLETQNPALPCVEFDEKVTGGPGTKGKGRRNEKYDMVTDCGYTISQVRSM 145
+ + L + +++E R + DC ++ + M
Sbjct: 153 FKEEIRNLSAVLTGIQEEIGAYDYEEL---------HQRVLSLETRLRDCMKKLTCGKLM 203
Query: 146 KI-----LKRFGGPAGLWTKDPLG--QTEKIYVLDG-TQNDTAFVFPRLRDFTLAMAARK 197
KI +K G G W DPL + +++ +D T N + + DF +R
Sbjct: 204 KITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMDSYTNNKIVREYKSIADFVSGAESRT 263
Query: 198 ASRVRVPFPWVGTGQLVYGGFLYFARRPPGRPGGGGEMENTLQLIKFHLANRTVVDSSVF 257
+ +PF W GT +VY G LYF + N + F + S +
Sbjct: 264 YN---LPFKWAGTNHVVYNGSLYFNKY----------QSNIIIKYSFDMGRVLAQRSLEY 310
Query: 258 PAEGLIPPYGLTADTYIDLAADEEGLWAVYATREDDRHLCLAKLDPQTLDTEQQWDTPCP 317
+ PY + IDL ADE GLWAVYAT ++ ++ +++L+ TL+ + W T P
Sbjct: 311 AGFHNVYPYTWGGFSDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLEVMKSWSTGYP 370
Query: 318 RENAEAAFVICGTLYVVYNTRPASRARIQCSFDASGTLTPERAALPYFPRRYGAHASLRY 377
+ +A +F+ICGTLYV + A++ S+ ++ T T E +P F +Y + L Y
Sbjct: 371 KRSAGESFMICGTLYV--TNSHLTGAKVYYSY-STKTSTYEYTDIP-FHNQYFHISMLDY 426
Query: 378 NPRERQLYAWDDGYQIVYKLEM 399
N R+R LYAW++G+Q+++ + +
Sbjct: 427 NARDRALYAWNNGHQVLFNVTL 448
>gi|6912464 latrophilin 2 precursor [Homo sapiens]
Length = 1403
Score = 125 bits (314), Expect = 7e-29
Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 22/251 (8%)
Query: 155 AGLWTKDPLGQTEKIYVLDGT--QNDTAFVFPRLRDFTLAMAARKASRVRVPFPWVGTGQ 212
AG W KDPL +KIY + T + DT + L DF +R+ + ++P GTG
Sbjct: 156 AGAWCKDPLQAADKIYFMPWTPYRTDTLIEYASLEDF---QNSRQTTTYKLPNRVDGTGF 212
Query: 213 LVYGGFLYFARRPPGRPGGGGEMENTLQLIKFHLANRTVVDSSVFPAEGL--IPPYGLTA 270
+VY G ++F + E T ++KF L R ++ PY
Sbjct: 213 VVYDGAVFFNK------------ERTRNIVKFDLRTRIKSGEAIINYANYHDTSPYRWGG 260
Query: 271 DTYIDLAADEEGLWAVYATREDDRHLCLAKLDPQTLDTEQQWDTPCPRENAEAAFVICGT 330
T IDLA DE GLW +YAT +++ + +++L+P TL E W+T + A AF+ICG
Sbjct: 261 KTDIDLAVDENGLWVIYATEQNNGMIVISQLNPYTLRFEATWETVYDKRAASNAFMICGV 320
Query: 331 LYV---VYNTRPASRARIQCSFDASGTLTPERAALPYFPRRYGAHASLRYNPRERQLYAW 387
LYV VY + + + + L FP +Y A++ YNPR+ QLY W
Sbjct: 321 LYVVRSVYQDNESETGKNSIDYIYNTRLNRGEYVDVPFPNQYQYIAAVDYNPRDNQLYVW 380
Query: 388 DDGYQIVYKLE 398
++ + + Y LE
Sbjct: 381 NNNFILRYSLE 391
>gi|4557779 myocilin [Homo sapiens]
Length = 504
Score = 125 bits (313), Expect = 9e-29
Identities = 111/410 (27%), Positives = 181/410 (44%), Gaps = 57/410 (13%)
Query: 28 EYMERRLAALEERLAQCQDQSSRHAAELRDFKNKMLPLLEVAEKEREALRTEADTISGRV 87
E ++R L L +DQ EL + +L V E+E++ LR E + ++ R+
Sbjct: 115 EGLQRELGTLRRE----RDQLETQTRELETAYSNLLRDKSVLEEEKKRLRQENENLARRL 170
Query: 88 DRLEREVDYL------ETQNPA-----------------LPCVEFDEKVTGGPGTKGKGR 124
+ +EV L +T++ A L E ++T P ++
Sbjct: 171 ESSSQEVARLRRGQCPQTRDTARAVPPGSREVSTWNLDTLAFQELKSELTEVPASRILKE 230
Query: 125 RNEKY----DMVTDCGYTI--SQVRSMKILKRFGGPAGLWTKDPLGQ----TEKIYVLDG 174
Y + T CG + + +++ + G G+W +DP E + +D
Sbjct: 231 SPSGYLRSGEGDTGCGELVWVGEPLTLRTAETITGKYGVWMRDPKPTYPYTQETTWRIDT 290
Query: 175 TQNDTAFVFPRLRDFTLAMAARKASRVRV-PFPWVGTGQLVYGGFLYFARRPPGRPGGGG 233
D VF D S+V + P P TG +VY G LYF G
Sbjct: 291 VGTDVRQVFEY--DLISQFMQGYPSKVHILPRPLESTGAVVYSGSLYFQ---------GA 339
Query: 234 EMENTLQLIKFHLANRTVVDSSVFPAEGLIP--PYGLTADTYIDLAADEEGLWAVYATRE 291
E +I++ L TV P G PY T IDLA DE GLW +Y+T E
Sbjct: 340 ESRT---VIRYELNTETVKAEKEIPGAGYHGQFPYSWGGYTDIDLAVDEAGLWVIYSTDE 396
Query: 292 DDRHLCLAKLDPQTLDTEQQWDTPCPRENAEAAFVICGTLYVVYNTRPASRARIQCSFDA 351
+ L+KL+P+ L+ EQ W+T +++ AF+ICGTLY V ++ ++ A + ++D
Sbjct: 397 AKGAIVLSKLNPENLELEQTWETNIRKQSVANAFIICGTLYTV-SSYTSADATVNFAYD- 454
Query: 352 SGTLTPERAALPYFPRRYGAHASLRYNPRERQLYAWDDGYQIVYKLEMRK 401
+GT + +P F RY + + YNP E++L+AWD+ + Y +++ K
Sbjct: 455 TGTGISKTLTIP-FKNRYKYSSMIDYNPLEKKLFAWDNLNMVTYDIKLSK 503
>gi|46195719 olfactomedin-like 2B [Homo sapiens]
Length = 750
Score = 121 bits (303), Expect = 1e-27
Identities = 97/342 (28%), Positives = 148/342 (43%), Gaps = 48/342 (14%)
Query: 69 AEKEREALRTEADTI-----SGRVDRLEREVDYLETQNPALPCVEFDEKVTGGPGTKGKG 123
A REAL T+ + R D L ++ PA P + +E+
Sbjct: 436 AVSPREALMEAMHTVPVPPTTVRTDSLGKDAPAGWGTTPASPTLSPEEE----------- 484
Query: 124 RRNEKYDMVTDCGYTISQVRSMKILKRFGGPAGLWTKDPLGQTEKIYVLDGTQNDTAFVF 183
++ +++ C T+S + +G G W KDPL + E+IYV + +T F
Sbjct: 485 --DDIRNVIGRCKDTLSTITGPTTQNTYGRNEGAWMKDPLAKDERIYVTNYYYGNTLVEF 542
Query: 184 PRLRDFTLAMAARKASRVRVPFPWVGTGQLVYGGFLYFARRPPGRPGGGGEMENTLQLIK 243
L +F R ++ ++P+ W+GTG +VY G Y+ R T +IK
Sbjct: 543 RNLENFK---QGRWSNSYKLPYSWIGTGHVVYNGAFYYNRA------------FTRNIIK 587
Query: 244 FHLANRTVVDSSVFP--AEGLIPPYGLTADTYIDLAADEEGLWAVYATREDDRH----LC 297
+ L R V ++ A P+ + +D A DE GLW +Y +D+ +
Sbjct: 588 YDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWLIYPALDDEGFSQEVIV 647
Query: 298 LAKLDPQTLDTEQQ--WDTPCPRENAEAAFVICGTLYVV--YNTRPASRARIQCSFDASG 353
L+KL+ L T+++ W T R FVICG LY V YN R A I +FD
Sbjct: 648 LSKLNAADLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQR---NANISYAFDTHT 704
Query: 354 TLTPERAALPYFPRRYGAHASLRYNPRERQLYAWDDGYQIVY 395
L F Y + YNP++R LYAWD+G+Q+ Y
Sbjct: 705 NTQIVPRLL--FENEYSYTTQIDYNPKDRLLYAWDNGHQVTY 744
>gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens]
Length = 1474
Score = 120 bits (301), Expect = 2e-27
Identities = 79/251 (31%), Positives = 121/251 (48%), Gaps = 22/251 (8%)
Query: 155 AGLWTKDPLGQTEKIYVLDGT--QNDTAFVFPRLRDFTLAMAARKASRVRVPFPWVGTGQ 212
+G W KDPL ++IYV+ + DT + D+ +AAR + R+P GTG
Sbjct: 160 SGAWCKDPLQAGDRIYVMPWIPYRTDTLTEYASWEDY---VAARHTTTYRLPNRVDGTGF 216
Query: 213 LVYGGFLYFARRPPGRPGGGGEMENTLQLIKFHLANRTVVDSSVFPAEGL--IPPYGLTA 270
+VY G +++ + E T ++K+ L R +V PY
Sbjct: 217 VVYDGAVFYNK------------ERTRNIVKYDLRTRIKSGETVINTANYHDTSPYRWGG 264
Query: 271 DTYIDLAADEEGLWAVYATREDDRHLCLAKLDPQTLDTEQQWDTPCPRENAEAAFVICGT 330
T IDLA DE GLW +YAT ++ L +++L+P TL E W+T + +A AF++CG
Sbjct: 265 KTDIDLAVDENGLWVIYATEGNNGRLVVSQLNPYTLRFEGTWETGYDKRSASNAFMVCGV 324
Query: 331 LYV---VYNTRPASRARIQCSFDASGTLTPERAALPYFPRRYGAHASLRYNPRERQLYAW 387
LYV VY + A + + + E FP Y +S+ YNPR+ QLY W
Sbjct: 325 LYVLRSVYVDDDSEAAGNRVDYAFNTNANREEPVSLTFPNPYQFISSVDYNPRDNQLYVW 384
Query: 388 DDGYQIVYKLE 398
++ + + Y LE
Sbjct: 385 NNYFVVRYSLE 395
>gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens]
Length = 1469
Score = 120 bits (301), Expect = 2e-27
Identities = 79/251 (31%), Positives = 121/251 (48%), Gaps = 22/251 (8%)
Query: 155 AGLWTKDPLGQTEKIYVLDGT--QNDTAFVFPRLRDFTLAMAARKASRVRVPFPWVGTGQ 212
+G W KDPL ++IYV+ + DT + D+ +AAR + R+P GTG
Sbjct: 155 SGAWCKDPLQAGDRIYVMPWIPYRTDTLTEYASWEDY---VAARHTTTYRLPNRVDGTGF 211
Query: 213 LVYGGFLYFARRPPGRPGGGGEMENTLQLIKFHLANRTVVDSSVFPAEGL--IPPYGLTA 270
+VY G +++ + E T ++K+ L R +V PY
Sbjct: 212 VVYDGAVFYNK------------ERTRNIVKYDLRTRIKSGETVINTANYHDTSPYRWGG 259
Query: 271 DTYIDLAADEEGLWAVYATREDDRHLCLAKLDPQTLDTEQQWDTPCPRENAEAAFVICGT 330
T IDLA DE GLW +YAT ++ L +++L+P TL E W+T + +A AF++CG
Sbjct: 260 KTDIDLAVDENGLWVIYATEGNNGRLVVSQLNPYTLRFEGTWETGYDKRSASNAFMVCGV 319
Query: 331 LYV---VYNTRPASRARIQCSFDASGTLTPERAALPYFPRRYGAHASLRYNPRERQLYAW 387
LYV VY + A + + + E FP Y +S+ YNPR+ QLY W
Sbjct: 320 LYVLRSVYVDDDSEAAGNRVDYAFNTNANREEPVSLTFPNPYQFISSVDYNPRDNQLYVW 379
Query: 388 DDGYQIVYKLE 398
++ + + Y LE
Sbjct: 380 NNYFVVRYSLE 390
>gi|163792198 latrophilin 3 precursor [Homo sapiens]
Length = 1469
Score = 118 bits (295), Expect = 1e-26
Identities = 77/251 (30%), Positives = 120/251 (47%), Gaps = 22/251 (8%)
Query: 155 AGLWTKDPLGQTEKIYVLDGT--QNDTAFVFPRLRDFTLAMAARKASRVRVPFPWVGTGQ 212
+G W KDPL ++KIY + T + DT + DF +A R + ++P GTG
Sbjct: 155 SGAWCKDPLQASDKIYYMPWTPYRTDTLTEYSSKDDF---IAGRPTTTYKLPHRVDGTGF 211
Query: 213 LVYGGFLYFARRPPGRPGGGGEMENTLQLIKFHLANRTVVDSSVFPAEGL--IPPYGLTA 270
+VY G L+F + E T ++KF L R ++ PY
Sbjct: 212 VVYDGALFFNK------------ERTRNIVKFDLRTRIKSGEAIIANANYHDTSPYRWGG 259
Query: 271 DTYIDLAADEEGLWAVYATREDDRHLCLAKLDPQTLDTEQQWDTPCPRENAEAAFVICGT 330
+ IDLA DE GLW +YAT +++ + +++L+P TL E WDT + +A AF+ICG
Sbjct: 260 KSDIDLAVDENGLWVIYATEQNNGKIVISQLNPYTLRIEGTWDTAYDKRSASNAFMICGI 319
Query: 331 LYV---VYNTRPASRARIQCSFDASGTLTPERAALPYFPRRYGAHASLRYNPRERQLYAW 387
LYV VY + + + + + FP Y A++ YNPR+ LY W
Sbjct: 320 LYVVKSVYEDDDNEATGNKIDYIYNTDQSKDSLVDVPFPNSYQYIAAVDYNPRDNLLYVW 379
Query: 388 DDGYQIVYKLE 398
++ + + Y L+
Sbjct: 380 NNYHVVKYSLD 390
>gi|116014339 olfactomedin-like 2A [Homo sapiens]
Length = 652
Score = 117 bits (293), Expect = 2e-26
Identities = 84/291 (28%), Positives = 129/291 (44%), Gaps = 34/291 (11%)
Query: 116 GPGTKGKGRRNEKYDMVTDCGYTISQVRSMKILKRFGGPAGLWTKDPLGQTEKIYVLDGT 175
GP +GR C T+ V +G G W KDP + ++IYV +
Sbjct: 383 GPEVSSQGRE-------ASCEGTLRAVDPPVRHHSYGRHEGAWMKDPAARDDRIYVTNYY 435
Query: 176 QNDTAFVFPRLRDFTLAMAARKASRVRVPFPWVGTGQLVYGGFLYFARRPPGRPGGGGEM 235
++ F L +F R ++ ++P+ W+GTG +VY G Y+ R
Sbjct: 436 YGNSLVEFRNLENFK---QGRWSNMYKLPYNWIGTGHVVYQGAFYYNRA----------- 481
Query: 236 ENTLQLIKFHLANRTVVDSSVFPAEGL--IPPYGLTADTYIDLAADEEGLWAVYATREDD 293
T +IK+ L R V ++ P P+ + ID A DE GLW +Y +D
Sbjct: 482 -FTKNIIKYDLRQRFVASWALLPDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPAVDDR 540
Query: 294 RH-----LCLAKLDPQTLDTEQQ--WDTPCPRENAEAAFVICGTLYVVYNTRPASRARIQ 346
+ L++LDP L ++ W T R + F++CG LY V +T ++
Sbjct: 541 DEAQPEVIVLSRLDPGDLSVHRETTWKTRLRRNSYGNCFLVCGILYAV-DTYNQQEGQVA 599
Query: 347 CSFDASGTLTPERAALPYFPRRYGAHASLRYNPRERQLYAWDDGYQIVYKL 397
+FD T T R LP+ + + YNP+ER LYAWD+G+Q+ Y L
Sbjct: 600 YAFDTH-TGTDARPQLPFL-NEHAYTTQIDYNPKERVLYAWDNGHQLTYTL 648
>gi|98986321 gliomedin [Homo sapiens]
Length = 551
Score = 80.9 bits (198), Expect = 2e-15
Identities = 78/318 (24%), Positives = 140/318 (44%), Gaps = 47/318 (14%)
Query: 92 REVDYLETQNPALPC-VEFDEKVTGGPGTKGKGRRNEKYD-MVTDCGYTISQVRSMKILK 149
R+ Q P C + D+ + G K + + + M+T G + V+ +K+ +
Sbjct: 262 RQPSMFNGQCPGETCAIPNDDTLVGKADEKASEHHSPQAESMITSIG---NPVQVLKVTE 318
Query: 150 RFGGPAGLWTKDPLGQTE-KIYVLDGTQNDTAFVFPRLRDFTLAMAARKASRVRVPFPWV 208
FG W ++ +++ +I+V T++ + + +D ++ + + +P+ +
Sbjct: 319 TFG----TWIRESANKSDDRIWV---TEHFSGIMVKEFKDQP-SLLNGSYTFIHLPYYFH 370
Query: 209 GTGQLVYGGFLYFARRPPGRPGGGGEM------ENTLQLIKFHLANRTVVDSSVFPAEGL 262
G G +VY LY+ + GG + + T Q +K L N D A
Sbjct: 371 GCGHVVYNNSLYYHK------GGSNTLVRFEFGQETSQTLK--LENALYFDRKYLFAN-- 420
Query: 263 IPPYGLTADTYIDLAADEEGLWAVYATREDDRHLCLAKLDPQTLDTEQQWDTPCPRENAE 322
+ TY +LA DE+GLW +YA+ D + +A+LD +T Q +T P+ A
Sbjct: 421 -------SKTYFNLAVDEKGLWIIYASSVDGSSILVAQLDERTFSVVQHVNTTYPKSKAG 473
Query: 323 AAFVICGTLYVVYNTRPASRARIQCSFDASGTLTPERAALPYFPRR--YGAHASLRYNPR 380
AF+ G LYV R+ +FD G + F R A L YN R
Sbjct: 474 NAFIARGILYVT----DTKDMRVTFAFDLLG----GKQINANFDLRTSQSVLAMLAYNMR 525
Query: 381 ERQLYAWDDGYQIVYKLE 398
++ LY+W+DG+ ++Y ++
Sbjct: 526 DQHLYSWEDGHLMLYPVQ 543
>gi|32313593 olfactomedin 4 precursor [Homo sapiens]
Length = 510
Score = 75.1 bits (183), Expect = 1e-13
Identities = 69/259 (26%), Positives = 112/259 (43%), Gaps = 30/259 (11%)
Query: 156 GLWTKD--PLGQTEKIYVL-----DGTQNDTAFVFPRLRDFTLAMAARKASRVRVPFPWV 208
G W +D P + +Y + DG + ++ L D L + AR+ +R+ +
Sbjct: 272 GAWGRDYSPQHPNKGLYWVAPLNTDGRLLEYYRLYNTLDDLLLYINARE---LRITYGQ- 327
Query: 209 GTGQLVYGGFLYFARRPPGRPGGGGEMENTLQLIKFHLANRTVVDSSVFP--AEGLIPPY 266
G+G VY +Y M NT + + +L T+ + P A Y
Sbjct: 328 GSGTAVYNNNMYV------------NMYNTGNIARVNLTTNTIAVTQTLPNAAYNNRFSY 375
Query: 267 GLTADTYIDLAADEEGLWAVYATREDDRHLCLAKLDPQTLDTEQQWDTPCPRENAEAAFV 326
A ID A DE GLW +Y+T ++ ++KL+ TL W T + +A AF+
Sbjct: 376 ANVAWQDIDFAVDENGLWVIYSTEASTGNMVISKLNDTTLQVLNTWYTKQYKPSASNAFM 435
Query: 327 ICGTLYVVYNTRPASRARIQCSFDASGTLTPERAALPYFPRRYGAHA-SLRYNPRERQLY 385
+CG LY TR R + F T T + L + S+ YNP +++LY
Sbjct: 436 VCGVLYA---TR-TMNTRTEEIFYYYDTNTGKEGKLDIVMHKMQEKVQSINYNPFDQKLY 491
Query: 386 AWDDGYQIVYKLEMRKKEE 404
++DGY + Y L + +K +
Sbjct: 492 VYNDGYLLNYDLSVLQKPQ 510
>gi|7710152 alpha-1,3-mannosyl-glycoprotein
4-beta-N-acetylglucosaminyltransferase B isoform 1
[Homo sapiens]
Length = 548
Score = 39.3 bits (90), Expect = 0.006
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 13 LSWSGPLQGQQHHLVEYMERRLAALEERLAQCQDQSSRHAAELRDFKNKMLPLLEVAEKE 72
LSW L GQ+ +V+ +R AL +RL + +S + + EL N +L ++ A E
Sbjct: 22 LSWYAALSGQKGDVVDVYQREFLALRDRLHAAEQESLKRSKEL----NLVLDEIKRAVSE 77
Query: 73 REALR 77
R+ALR
Sbjct: 78 RQALR 82
>gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens]
Length = 285
Score = 38.5 bits (88), Expect = 0.011
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 20 QGQQHHLVEYMERRLAALEERLAQCQDQSSRHAAELRDFKNKMLPLLEVAEKEREALRTE 79
Q Q + +E LAA++++L +D+ +++ L+D + K LE+AEK+ E
Sbjct: 30 QKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEK----LELAEKKAADAEAE 85
Query: 80 ADTISGRVDRLEREVD 95
+++ R+ +E E+D
Sbjct: 86 VASLNRRIQLVEEELD 101
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 35.8 bits (81), Expect = 0.071
Identities = 22/89 (24%), Positives = 43/89 (48%)
Query: 12 LLSWSGPLQGQQHHLVEYMERRLAALEERLAQCQDQSSRHAAELRDFKNKMLPLLEVAEK 71
++ G + + LV ME R+A LE+RL + + R + K+ L+ +
Sbjct: 1133 IIHLEGSYRSSKEGLVVQMEARIAELEDRLESEERDRANLQLSNRRLERKVKELVMQVDD 1192
Query: 72 EREALRTEADTISGRVDRLEREVDYLETQ 100
E +L + D +S R+ ++R+V+ E +
Sbjct: 1193 EHLSLTDQKDQLSLRLKAMKRQVEEAEEE 1221
>gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens]
Length = 511
Score = 35.4 bits (80), Expect = 0.093
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 18 PLQGQQHHLVEYMERRLAALEERLAQCQDQSSRHAAELRDFKNKMLPLLEVAEKEREALR 77
PL E +E RL L++ L C+ S E ++ +M E E +ALR
Sbjct: 165 PLDEAVQEAKELLESRLRVLKKELEDCEVFRSTEKKESKELLKQMAAEQEKVGAEFQALR 224
Query: 78 T----EADTISGRVDRLEREVDYLETQNPALPCVEFDE 111
+ + GR++ L REV + +N A VE +
Sbjct: 225 AFLVEQEGRLLGRLEELSREVAQKQNENLAQLGVEITQ 262
>gi|169215514 PREDICTED: hypothetical protein [Homo sapiens]
Length = 357
Score = 34.3 bits (77), Expect = 0.21
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 22 QQHHLVEYMERRLAALEERLAQ-CQDQSSRHAAELRDFKNKMLPLLEVAEKEREALRTEA 80
Q+ +E + R L A E L Q QD S R + LR PL A REA R A
Sbjct: 67 QRKQELEKLMRGLEAESESLNQRLQDLSERERSLLRRRSQAAQPLQGEA---REAARERA 123
Query: 81 DTISGRVDRLEREVDYLETQNPAL 104
+ + R++ ER +YLE + L
Sbjct: 124 ERVRRRLEEAERHKEYLEQHSRQL 147
>gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]
Length = 284
Score = 34.3 bits (77), Expect = 0.21
Identities = 17/66 (25%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 30 MERRLAALEERLAQCQDQSSRHAAELRDFKNKMLPLLEVAEKEREALRTEADTISGRVDR 89
+E L +L+++L +D+ +++ L+D + K LE+AEK+ + +++ R+
Sbjct: 39 LEDELVSLQKKLKGTEDELDKYSEALKDAQEK----LELAEKKATDAEADVASLNRRIQL 94
Query: 90 LEREVD 95
+E E+D
Sbjct: 95 VEEELD 100
>gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens]
Length = 284
Score = 34.3 bits (77), Expect = 0.21
Identities = 17/66 (25%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 30 MERRLAALEERLAQCQDQSSRHAAELRDFKNKMLPLLEVAEKEREALRTEADTISGRVDR 89
+E L +L+++L +D+ +++ L+D + K LE+AEK+ + +++ R+
Sbjct: 39 LEDELVSLQKKLKGTEDELDKYSEALKDAQEK----LELAEKKATDAEADVASLNRRIQL 94
Query: 90 LEREVD 95
+E E+D
Sbjct: 95 VEEELD 100
>gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens]
Length = 284
Score = 34.3 bits (77), Expect = 0.21
Identities = 17/66 (25%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 30 MERRLAALEERLAQCQDQSSRHAAELRDFKNKMLPLLEVAEKEREALRTEADTISGRVDR 89
+E L +L+++L +D+ +++ L+D + K LE+AEK+ + +++ R+
Sbjct: 39 LEDELVSLQKKLKGTEDELDKYSEALKDAQEK----LELAEKKATDAEADVASLNRRIQL 94
Query: 90 LEREVD 95
+E E+D
Sbjct: 95 VEEELD 100
>gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens]
Length = 284
Score = 34.3 bits (77), Expect = 0.21
Identities = 17/66 (25%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 30 MERRLAALEERLAQCQDQSSRHAAELRDFKNKMLPLLEVAEKEREALRTEADTISGRVDR 89
+E L +L+++L +D+ +++ L+D + K LE+AEK+ + +++ R+
Sbjct: 39 LEDELVSLQKKLKGTEDELDKYSEALKDAQEK----LELAEKKATDAEADVASLNRRIQL 94
Query: 90 LEREVD 95
+E E+D
Sbjct: 95 VEEELD 100
>gi|24430181 outer dense fiber of sperm tails 2 isoform 1 [Homo
sapiens]
Length = 805
Score = 34.3 bits (77), Expect = 0.21
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 34 LAALEERLAQCQDQSSRHA----------AELRDFKNKMLPLLEVAEKEREALRTEADTI 83
L E +LA+CQDQ + ++LR LE+A ++ +A + E +
Sbjct: 579 LKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQL 638
Query: 84 SGRVDRLEREVDYLETQN 101
S +VD LER+++ QN
Sbjct: 639 SLKVDELERKLEATSAQN 656
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 33.9 bits (76), Expect = 0.27
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 27 VEYMERRLAALEERLAQCQDQSSRHAAE---LRDFKNKMLPLLEVAEKEREALRTEADTI 83
++ +E + A L++ L + +D SS E L+ K LEV ++RE L+ E
Sbjct: 226 LKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQA 285
Query: 84 SGRVDRLEREVD 95
+D L+ +VD
Sbjct: 286 ESTIDELKEQVD 297
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 33.9 bits (76), Expect = 0.27
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 27 VEYMERRLAALEERLAQCQDQSSRHAAE---LRDFKNKMLPLLEVAEKEREALRTEADTI 83
++ +E + A L++ L + +D SS E L+ K LEV ++RE L+ E
Sbjct: 340 LKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQA 399
Query: 84 SGRVDRLEREVD 95
+D L+ +VD
Sbjct: 400 ESTIDELKEQVD 411
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 33.9 bits (76), Expect = 0.27
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 27 VEYMERRLAALEERLAQCQDQSSRHAAE---LRDFKNKMLPLLEVAEKEREALRTEADTI 83
++ +E + A L++ L + +D SS E L+ K LEV ++RE L+ E
Sbjct: 226 LKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQA 285
Query: 84 SGRVDRLEREVD 95
+D L+ +VD
Sbjct: 286 ESTIDELKEQVD 297
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 33.9 bits (76), Expect = 0.27
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 27 VEYMERRLAALEERLAQCQDQSSRHAAE---LRDFKNKMLPLLEVAEKEREALRTEADTI 83
++ +E + A L++ L + +D SS E L+ K LEV ++RE L+ E
Sbjct: 360 LKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQA 419
Query: 84 SGRVDRLEREVD 95
+D L+ +VD
Sbjct: 420 ESTIDELKEQVD 431
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 33.5 bits (75), Expect = 0.35
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 31 ERRLAALEERLAQCQDQSSRHAAELRDFKNKMLPLLEVAEKEREALR---TEADTISGRV 87
E L A+EE +AQ +Q RH E + K + L E+E E LR + ++S
Sbjct: 589 EAALKAMEEAVAQVLEQDQRHLLESKQEKMQQLREKLCQEEEEEILRLHQQKEQSLSSLR 648
Query: 88 DRLEREVDYLETQ 100
+RL++ ++ E +
Sbjct: 649 ERLQKAIEEEEAR 661
>gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo
sapiens]
Length = 887
Score = 33.5 bits (75), Expect = 0.35
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 12 LLSWSGPLQGQQHHLVEYMERRLAALEERLAQCQDQSSRHAAELRDFKN--KMLPLLEVA 69
LL S + Q+H L ERR L+ERLAQ + Q SR E R N ++ P + A
Sbjct: 409 LLPGSSDWEQQRHQL----ERRKEELKERLAQVRKQISREEHENRHMGNYRRIYPPEDKA 464
Query: 70 --EKEREALRTEADT-ISGRVDRLEREVD 95
EK L T +SGR +RE++
Sbjct: 465 LLEKYENLLAVAFQTFLSGRAASFQRELN 493
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,366,895
Number of Sequences: 37866
Number of extensions: 822451
Number of successful extensions: 2855
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 2614
Number of HSP's gapped (non-prelim): 282
length of query: 406
length of database: 18,247,518
effective HSP length: 105
effective length of query: 301
effective length of database: 14,271,588
effective search space: 4295747988
effective search space used: 4295747988
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.