Guide to the Human Genome
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Name: OLFML3 Sequence: fasta or formatted (406aa) NCBI GI: 9910270
Description:

olfactomedin-like 3

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         35           2
 C cysteine            1.7          7           1
 D aspartate           5.9         24           2
 E glutamate           7.9         32           3
 F phenylalanine       3.7         15           1
 G glycine             7.6         31           4
 H histidine           1.5          6           2
 I isoleucine          2.7         11           1
 K lysine              4.2         17           2
 L leucine            10.6         43           2
 M methionine          2.0          8           1
 N asparagine          2.2          9           1
 P proline             6.4         26           2
 Q glutamine           4.4         18           2
 R arginine            8.9         36           2
 S serine              3.7         15           2
 T threonine           6.4         26           1
 V valine              5.7         23           2
 W tryptophan          1.5          6           1
 Y tyrosine            4.4         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactomedin-like 3 
OLFML1                0.265   olfactomedin-like 1 
OLFM1                 0.149   olfactomedin related ER localized protein isoform 1 ...
OLFM2                 0.132   olfactomedin 2 
OLFM3                 0.126   olfactomedin 3 
LPHN2                 0.124   latrophilin 2 precursor 
MYOC                  0.124   myocilin 
OLFML2B               0.119   olfactomedin-like 2B 
LPHN1                 0.118   latrophilin 1 isoform 1 precursor 
LPHN1                 0.118   latrophilin 1 isoform 2 precursor 
LPHN3                 0.115   latrophilin 3 precursor 
OLFML2A               0.114   olfactomedin-like 2A 
GLDN                  0.069   gliomedin 
OLFM4                 0.062   olfactomedin 4 precursor 
MGAT4B                0.017   alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...
TPM3                  0.017   tropomyosin 3 isoform 1 
CGNL1                 0.014   cingulin-like 1 
TRIM7                 0.012   tripartite motif-containing 7 isoform 1 
TMEM191C              0.011   PREDICTED: hypothetical protein 
TPM1                  0.011   tropomyosin 1 alpha chain isoform 4 
TPM1                  0.011   tropomyosin 1 alpha chain isoform 1 
TPM1                  0.011   tropomyosin 1 alpha chain isoform 3 
TPM1                  0.011   tropomyosin 1 alpha chain isoform 5 
ODF2                  0.011   outer dense fiber of sperm tails 2 isoform 1 
DCTN1                 0.011   dynactin 1 isoform 4 
DCTN1                 0.011   dynactin 1 isoform 3 
DCTN1                 0.011   dynactin 1 isoform 2 
DCTN1                 0.011   dynactin 1 isoform 1 
CEP164                0.010   centrosomal protein 164kDa 
TTLL7                 0.010   tubulin tyrosine ligase-like family, member 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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