Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 92110017

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|92110017 serine PI Kazal type 5-like 3 [Homo sapiens]
         (94 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|92110017 serine PI Kazal type 5-like 3 [Homo sapiens]              212   5e-56
gi|94536774 serine peptidase inhibitor, Kazal type 9 [Homo sapiens]    51   2e-07
gi|47679099 Kazal type serine protease inhibitor 5-like 2 [Homo ...    50   5e-07
gi|10863911 serine protease inhibitor, Kazal type 2 (acrosin-try...    43   6e-05
gi|45505132 serine protease inhibitor, Kazal type 1 precursor [H...    42   1e-04
gi|14211875 esophagus cancer-related gene-2 [Homo sapiens]             38   0.002
gi|54873613 agrin [Homo sapiens]                                       37   0.003
gi|74027261 serine peptidase inhibitor, Kazal type 5 isoform b p...    37   0.004
gi|189163501 serine peptidase inhibitor, Kazal type 5 isoform a ...    37   0.004
gi|12383051 transmembrane protein with EGF-like and two follista...    35   0.013
gi|29568105 transmembrane protein with EGF-like and two follista...    35   0.013
gi|189163504 serine peptidase inhibitor, Kazal type 5 isoform c ...    35   0.017
gi|5453652 follistatin isoform FST317 precursor [Homo sapiens]         33   0.038
gi|7242222 follistatin isoform FST344 precursor [Homo sapiens]         33   0.038
gi|7657453 serine peptidase inhibitor, Kazal type 4 [Homo sapiens]     33   0.049
gi|68299793 serine protease inhibitor, Kazal type 6 [Homo sapiens]     32   0.084
gi|24308277 SPARC related modular calcium binding 2 [Homo sapiens]     30   0.42 
gi|93141003 testican 3 isoform 1 [Homo sapiens]                        28   2.1  
gi|93141001 testican 3 isoform 2 [Homo sapiens]                        28   2.1  
gi|11863156 RECK protein precursor [Homo sapiens]                      28   2.1  
gi|4504777 integrin, beta 7 [Homo sapiens]                             27   4.6  
gi|5901956 follistatin-like 1 precursor [Homo sapiens]                 27   4.6  
gi|48255955 plasma membrane calcium ATPase 3 isoform 3b [Homo sa...    27   4.6  
gi|48255953 plasma membrane calcium ATPase 3 isoform 3a [Homo sa...    27   4.6  
gi|78190498 secreted modular calcium-binding protein 1 isoform 1...    27   4.6  
gi|11545873 secreted modular calcium-binding protein 1 isoform 2...    27   4.6  

>gi|92110017 serine PI Kazal type 5-like 3 [Homo sapiens]
          Length = 94

 Score =  212 bits (540), Expect = 5e-56
 Identities = 94/94 (100%), Positives = 94/94 (100%)

Query: 1  MAAFPHKIIFFLVCSTLTHVAFSGIFNKRDFTRWPKPRCKMYIPLDPDYNADCPNVTAPV 60
          MAAFPHKIIFFLVCSTLTHVAFSGIFNKRDFTRWPKPRCKMYIPLDPDYNADCPNVTAPV
Sbjct: 1  MAAFPHKIIFFLVCSTLTHVAFSGIFNKRDFTRWPKPRCKMYIPLDPDYNADCPNVTAPV 60

Query: 61 CASNGHTFQNECFFCVEQREFHYRIKFEKYGKCD 94
          CASNGHTFQNECFFCVEQREFHYRIKFEKYGKCD
Sbjct: 61 CASNGHTFQNECFFCVEQREFHYRIKFEKYGKCD 94


>gi|94536774 serine peptidase inhibitor, Kazal type 9 [Homo
          sapiens]
          Length = 86

 Score = 51.2 bits (121), Expect = 2e-07
 Identities = 20/55 (36%), Positives = 32/55 (58%)

Query: 39 CKMYIPLDPDYNADCPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
          C  Y  L P     C ++  P+C S+G T++N+CFFC + ++    +KF  +GKC
Sbjct: 32 CSHYKKLPPGQQRFCHHMYDPICGSDGKTYKNDCFFCSKVKKTDGTLKFVHFGKC 86


>gi|47679099 Kazal type serine protease inhibitor 5-like 2 [Homo
          sapiens]
          Length = 97

 Score = 49.7 bits (117), Expect = 5e-07
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 12/94 (12%)

Query: 9  IFFLVCSTLTHVAFSGIFNKRDFTRWPKPR--CKMYIPLDPD----YNAD---CPNVTAP 59
          +F L+   L H+  S +   R +  WP PR   K+  P +      YN     CP +  P
Sbjct: 7  VFSLLSFILIHLVLSSVSGPRHW--WP-PRGIIKVKCPYEKVNLSWYNGTVNPCPGLYQP 63

Query: 60 VCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
          +C +N  T+ N C  CVE  + H RI+F   GKC
Sbjct: 64 ICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97


>gi|10863911 serine protease inhibitor, Kazal type 2
          (acrosin-trypsin inhibitor) [Homo sapiens]
          Length = 84

 Score = 42.7 bits (99), Expect = 6e-05
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 8/64 (12%)

Query: 31 FTRWPKPRCKMY-IPLDPDYNADCPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEK 89
          F+++  P C  Y +P        CP    PVC S+  T+ NEC  C++ RE  + IK  +
Sbjct: 28 FSKYRTPNCSQYRLP-------GCPRHFNPVCGSDMSTYANECTLCMKIREGGHNIKIIR 80

Query: 90 YGKC 93
           G C
Sbjct: 81 NGPC 84


>gi|45505132 serine protease inhibitor, Kazal type 1 precursor
          [Homo sapiens]
          Length = 79

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 53 CPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
          C  +  PVC ++G+T+ NEC  C E R+    I  +K G C
Sbjct: 39 CTKIYDPVCGTDGNTYPNECVLCFENRKRQTSILIQKSGPC 79


>gi|14211875 esophagus cancer-related gene-2 [Homo sapiens]
          Length = 85

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 53 CPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
          CP    PVC S+  T+ NEC  C E  + + R++F   G C
Sbjct: 45 CPITYLPVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 85


>gi|54873613 agrin [Homo sapiens]
          Length = 2045

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 53  CPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
           CP+V APVC S+  T+ NEC     Q     RI+    G C
Sbjct: 202 CPSVVAPVCGSDASTYSNECELQRAQCSQQRRIRLLSRGPC 242



 Score = 33.5 bits (75), Expect = 0.038
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 51  ADCPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKCD 94
           ++C  +  PVC S+GHT+ +EC   V        +     G C+
Sbjct: 557 SECVALAQPVCGSDGHTYPSECMLHVHACTHQISLHVASAGPCE 600



 Score = 30.4 bits (67), Expect = 0.32
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 7/69 (10%)

Query: 26  FNKRDFTRWPKPRCKMYIPLDPDYNADCPNVTAPVCASNGHTFQNECFFCVEQREFHYRI 85
           FN    +R  +PRC             C     PVCA +G T+ ++C+    +      I
Sbjct: 401 FNAVCLSRRGRPRCSCD-------RVTCDGAYRPVCAQDGRTYDSDCWRQQAECRQQRAI 453

Query: 86  KFEKYGKCD 94
             +  G CD
Sbjct: 454 PSKHQGPCD 462



 Score = 29.6 bits (65), Expect = 0.54
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 53  CPNVTAPVCASNGHTFQNEC 72
           CP   APVC  +G T++N+C
Sbjct: 349 CPARQAPVCGDDGVTYENDC 368



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 53  CPNVTAP------VCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
           CP +T P      VC S+G T+ NEC           +I  +  G C
Sbjct: 923 CPMLTCPEANATKVCGSDGVTYGNECQLKTIACRQGLQISIQSLGPC 969



 Score = 25.8 bits (55), Expect = 7.9
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 53  CPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKCD 94
           C ++  PVC S+G T+ + C            I+  + G CD
Sbjct: 494 CSSLYDPVCGSDGVTYGSACELEATACTLGREIQVARKGPCD 535


>gi|74027261 serine peptidase inhibitor, Kazal type 5 isoform b
            precursor [Homo sapiens]
          Length = 1064

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 31   FTRWPKPRCKMYIPLDPDYNADCPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKY 90
            F+      CK Y  L P     CP    PVC  +G T+ N C  C E             
Sbjct: 985  FSSLDSEMCKDYRVL-PRIGYLCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRST 1043

Query: 91   GKCD 94
            GKC+
Sbjct: 1044 GKCE 1047



 Score = 34.7 bits (78), Expect = 0.017
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 53  CPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
           CP+    VC ++G T+ N C  C E  +   +I  +  G+C
Sbjct: 111 CPDYYEAVCGTDGKTYDNRCALCAENAKTGSQIGVKSEGEC 151



 Score = 27.7 bits (60), Expect = 2.1
 Identities = 12/39 (30%), Positives = 15/39 (38%)

Query: 39  CKMYIPLDPDYNADCPNVTAPVCASNGHTFQNECFFCVE 77
           C  + P   D    C     PV   +G T  N+C  C E
Sbjct: 161 CSAFRPFVRDGRLGCTRENDPVLGPDGKTHGNKCAMCAE 199



 Score = 25.8 bits (55), Expect = 7.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 53  CPNVTAPVCASNGHTFQNECFFC 75
           CP    PV  ++G  + N+C+ C
Sbjct: 930 CPRENDPVHGADGKFYTNKCYMC 952


>gi|189163501 serine peptidase inhibitor, Kazal type 5 isoform a
            precursor [Homo sapiens]
          Length = 1094

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 31   FTRWPKPRCKMYIPLDPDYNADCPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKY 90
            F+      CK Y  L P     CP    PVC  +G T+ N C  C E             
Sbjct: 1015 FSSLDSEMCKDYRVL-PRIGYLCPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRST 1073

Query: 91   GKCD 94
            GKC+
Sbjct: 1074 GKCE 1077



 Score = 34.7 bits (78), Expect = 0.017
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 53  CPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
           CP+    VC ++G T+ N C  C E  +   +I  +  G+C
Sbjct: 111 CPDYYEAVCGTDGKTYDNRCALCAENAKTGSQIGVKSEGEC 151



 Score = 27.7 bits (60), Expect = 2.1
 Identities = 12/39 (30%), Positives = 15/39 (38%)

Query: 39  CKMYIPLDPDYNADCPNVTAPVCASNGHTFQNECFFCVE 77
           C  + P   D    C     PV   +G T  N+C  C E
Sbjct: 161 CSAFRPFVRDGRLGCTRENDPVLGPDGKTHGNKCAMCAE 199



 Score = 25.8 bits (55), Expect = 7.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 53  CPNVTAPVCASNGHTFQNECFFC 75
           CP    PV  ++G  + N+C+ C
Sbjct: 960 CPRENDPVHGADGKFYTNKCYMC 982


>gi|12383051 transmembrane protein with EGF-like and two
           follistatin-like domains 2 [Homo sapiens]
          Length = 374

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 4/32 (12%)

Query: 53  CPNVTAPVCASNGHTFQNECFF----CVEQRE 80
           C N   PVC SNG ++QNEC+     C +Q E
Sbjct: 95  CNNDYVPVCGSNGESYQNECYLRQAACKQQSE 126



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 50  NADCPNVTA-PVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
           N DC      P+CAS+G ++ N C       +   +I+    G+C
Sbjct: 183 NIDCSQTNFNPLCASDGKSYDNACQIKEASCQKQEKIEVMSLGRC 227


>gi|29568105 transmembrane protein with EGF-like and two
           follistatin-like domains 1 [Homo sapiens]
          Length = 380

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 4/32 (12%)

Query: 53  CPNVTAPVCASNGHTFQNECFF----CVEQRE 80
           C     PVC SNG T+QNECF     C  Q+E
Sbjct: 103 CHTNYIPVCGSNGDTYQNECFLRRAACKHQKE 134



 Score = 31.6 bits (70), Expect = 0.14
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 5/40 (12%)

Query: 50  NADCPNVTA-PVCASNGHTFQNECFF----CVEQREFHYR 84
           N DC   +  PVCAS+G ++ N CF     C++Q +   R
Sbjct: 191 NIDCSGYSFNPVCASDGSSYNNPCFVREASCIKQEQIDIR 230


>gi|189163504 serine peptidase inhibitor, Kazal type 5 isoform c
           precursor [Homo sapiens]
          Length = 916

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 53  CPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
           CP+    VC ++G T+ N C  C E  +   +I  +  G+C
Sbjct: 111 CPDYYEAVCGTDGKTYDNRCALCAENAKTGSQIGVKSEGEC 151



 Score = 27.7 bits (60), Expect = 2.1
 Identities = 12/39 (30%), Positives = 15/39 (38%)

Query: 39  CKMYIPLDPDYNADCPNVTAPVCASNGHTFQNECFFCVE 77
           C  + P   D    C     PV   +G T  N+C  C E
Sbjct: 161 CSAFRPFVRDGRLGCTRENDPVLGPDGKTHGNKCAMCAE 199


>gi|5453652 follistatin isoform FST317 precursor [Homo sapiens]
          Length = 317

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 18/64 (28%)

Query: 36  KPRCKMYIPLDPDYNADCPNVT--APVCASNGHTFQNECFF----CVEQREFHYRIKFEK 89
           KPRC            DC N+T   PVC  +G T++NEC      C EQ E    ++ + 
Sbjct: 113 KPRCVCA--------PDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPE----LEVQY 160

Query: 90  YGKC 93
            G+C
Sbjct: 161 QGRC 164



 Score = 28.1 bits (61), Expect = 1.6
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 5/35 (14%)

Query: 38  RCKMYIPLDPDYNADCPNVTAPVCASNGHTFQNEC 72
           RC +   L PD  +D      PVCAS+  T+ +EC
Sbjct: 266 RCSLCDELCPDSKSD-----EPVCASDNATYASEC 295


>gi|7242222 follistatin isoform FST344 precursor [Homo sapiens]
          Length = 344

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 18/64 (28%)

Query: 36  KPRCKMYIPLDPDYNADCPNVT--APVCASNGHTFQNECFF----CVEQREFHYRIKFEK 89
           KPRC            DC N+T   PVC  +G T++NEC      C EQ E    ++ + 
Sbjct: 113 KPRCVCA--------PDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPE----LEVQY 160

Query: 90  YGKC 93
            G+C
Sbjct: 161 QGRC 164



 Score = 28.1 bits (61), Expect = 1.6
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 5/35 (14%)

Query: 38  RCKMYIPLDPDYNADCPNVTAPVCASNGHTFQNEC 72
           RC +   L PD  +D      PVCAS+  T+ +EC
Sbjct: 266 RCSLCDELCPDSKSD-----EPVCASDNATYASEC 295


>gi|7657453 serine peptidase inhibitor, Kazal type 4 [Homo
          sapiens]
          Length = 86

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 53 CPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
          C  ++  VC ++G T+ NEC  C+ + +    I+  K GKC
Sbjct: 46 CSQMSNLVCGTDGLTYTNECQLCLARIKTKQDIQIMKDGKC 86


>gi|68299793 serine protease inhibitor, Kazal type 6 [Homo
          sapiens]
          Length = 80

 Score = 32.3 bits (72), Expect = 0.084
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 53 CPNVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
          C   + P C S+G T+ N+C FC    +   +I  +  GKC
Sbjct: 40 CTRESNPHCGSDGQTYGNKCAFCKAIVKSGGKISLKHPGKC 80


>gi|24308277 SPARC related modular calcium binding 2 [Homo
          sapiens]
          Length = 457

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 6/54 (11%)

Query: 46 DPDYNADCP-NVTAPVCASNGHTFQNECFF----CVE-QREFHYRIKFEKYGKC 93
          D D + DC  +   P+CAS+G TF + C F    C + Q E  YR   +   +C
Sbjct: 37 DKDCSLDCAGSPQKPLCASDGRTFLSRCEFQRAKCKDPQLEIAYRGNCKDVSRC 90


>gi|93141003 testican 3 isoform 1 [Homo sapiens]
          Length = 433

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)

Query: 53  CPNV-TAPVCASNGHTFQNEC 72
           CP V  +PVC S+GHT+  +C
Sbjct: 139 CPVVYPSPVCGSDGHTYSFQC 159


>gi|93141001 testican 3 isoform 2 [Homo sapiens]
          Length = 436

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)

Query: 53  CPNV-TAPVCASNGHTFQNEC 72
           CP V  +PVC S+GHT+  +C
Sbjct: 142 CPVVYPSPVCGSDGHTYSFQC 162


>gi|11863156 RECK protein precursor [Homo sapiens]
          Length = 971

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 22/84 (26%)

Query: 12  LVCST-LTHVAFSGIFNKRDFTRWPKPRCKMYIPLDPDYNADCPNVTAPVCASNGHTFQN 70
           LVCST L     S   ++R FT  P                +C +   PVC  NG T+ +
Sbjct: 608 LVCSTRLCLSEHSSEDDRRTFTGLP---------------CNCADQFVPVCGQNGRTYPS 652

Query: 71  ECFF-CVEQREFHYRIKFEKYGKC 93
            C   CV  ++  +     ++G C
Sbjct: 653 ACIARCVGLQDHQF-----EFGSC 671



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 6/37 (16%)

Query: 57  TAPVCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93
           T PVC  NG T+ + C        +  R+  + YG C
Sbjct: 757 TEPVCGHNGETYSSVC------AAYSDRVAVDYYGDC 787


>gi|4504777 integrin, beta 7 [Homo sapiens]
          Length = 798

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)

Query: 47  PDYNADC--PNVTAPVCASNGHTFQNEC 72
           PD  + C  PN T P+C+  GH     C
Sbjct: 521 PDLESGCRAPNGTGPLCSGKGHCQCGRC 548


>gi|5901956 follistatin-like 1 precursor [Homo sapiens]
          Length = 308

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)

Query: 53 CPNVTAPVCASNGHTFQNEC 72
          C     PVC SNG T+ N C
Sbjct: 58 CKPHKRPVCGSNGKTYLNHC 77


>gi|48255955 plasma membrane calcium ATPase 3 isoform 3b [Homo
           sapiens]
          Length = 1220

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 55  NVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEK 89
           N    + A  G     E F C+E +EF+ RI+ EK
Sbjct: 710 NTARAIAAKCGIIQPGEDFLCLEGKEFNRRIRNEK 744


>gi|48255953 plasma membrane calcium ATPase 3 isoform 3a [Homo
           sapiens]
          Length = 1173

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 55  NVTAPVCASNGHTFQNECFFCVEQREFHYRIKFEK 89
           N    + A  G     E F C+E +EF+ RI+ EK
Sbjct: 710 NTARAIAAKCGIIQPGEDFLCLEGKEFNRRIRNEK 744


>gi|78190498 secreted modular calcium-binding protein 1 isoform 1
          [Homo sapiens]
          Length = 435

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 46 DPDYNADCPNVTA-PVCASNGHTFQNEC 72
          DP  N  C      P+CAS+G ++++ C
Sbjct: 40 DPQCNLHCSRTQPKPICASDGRSYESMC 67


>gi|11545873 secreted modular calcium-binding protein 1 isoform 2
          [Homo sapiens]
          Length = 434

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 46 DPDYNADCPNVTA-PVCASNGHTFQNEC 72
          DP  N  C      P+CAS+G ++++ C
Sbjct: 40 DPQCNLHCSRTQPKPICASDGRSYESMC 67


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.331    0.143    0.505 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,142,372
Number of Sequences: 37866
Number of extensions: 174463
Number of successful extensions: 457
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 411
Number of HSP's gapped (non-prelim): 51
length of query: 94
length of database: 18,247,518
effective HSP length: 65
effective length of query: 29
effective length of database: 15,786,228
effective search space: 457800612
effective search space used: 457800612
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press