Guide to the Human Genome
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Name: GAS7 Sequence: fasta or formatted (416aa) NCBI GI: 41406078
Description:

growth arrest-specific 7 isoform b

Referenced in:

Additional Cell Cycle Functions
WW Domain

Other entries for this name:
alt prot [412aa] growth arrest-specific 7 isoform d
alt prot [336aa] growth arrest-specific 7 isoform a
alt prot [476aa] growth arrest-specific 7 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         23           1
 C cysteine            1.2          5           1
 D aspartate           4.8         20           2
 E glutamate           9.6         40           2
 F phenylalanine       2.2          9           1
 G glycine             4.3         18           1
 H histidine           2.9         12           2
 I isoleucine          3.1         13           1
 K lysine              8.9         37           2
 L leucine             8.2         34           3
 M methionine          3.4         14           1
 N asparagine          3.6         15           1
 P proline             6.5         27           4
 Q glutamine           6.5         27           2
 R arginine            5.8         24           2
 S serine              8.2         34           3
 T threonine           6.5         27           3
 V valine              4.8         20           1
 W tryptophan          1.7          7           1
 Y tyrosine            2.4         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth arrest-specific 7 isoform b 
GAS7                  0.998   growth arrest-specific 7 isoform c 
GAS7                  0.989   growth arrest-specific 7 isoform d 
GAS7                  0.751   growth arrest-specific 7 isoform a 
PSTPIP1               0.081   proline-serine-threonine phosphatase interacting pro...
FCHO1                 0.077   FCH domain only 1 isoform b 
FCHO1                 0.077   FCH domain only 1 isoform b 
FCHO1                 0.077   FCH domain only 1 isoform a 
PSTPIP2               0.070   proline-serine-threonine phosphatase interacting pr...
FCHO2                 0.066   FCH domain only 2 isoform a 
FCHO2                 0.063   FCH domain only 2 isoform b 
NOSTRIN               0.057   nitric oxide synthase trafficker isoform 2 
FNBP1                 0.039   formin binding protein 1 
SETD2                 0.038   SET domain containing 2 
TRIP10                0.036   thyroid hormone receptor interactor 10 
FCHO1                 0.035   FCH domain only 1 isoform c 
PPFIA1                0.032   PTPRF interacting protein alpha 1 isoform a 
PPFIA1                0.032   PTPRF interacting protein alpha 1 isoform b 
PPFIA3                0.032   PTPRF interacting protein alpha 3 
PACSIN2               0.032   protein kinase C and casein kinase substrate in neu...
GOLGA4                0.029   golgi autoantigen, golgin subfamily a, 4 
MYH9                  0.029   myosin, heavy polypeptide 9, non-muscle 
MYH11                 0.029   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.029   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.029   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.029   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
AZI1                  0.029   5-azacytidine induced 1 isoform b 
AZI1                  0.029   5-azacytidine induced 1 isoform a 
NOSTRIN               0.028   nitric oxide synthase trafficker isoform 1 
PLEC1                 0.027   plectin 1 isoform 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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